RNA–Protein interactions for RNA: YBR159W

IFA38, Transcript of Microsomal beta-keto-reductase, yeastyeast

Gene IFA38, Length 1,044 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IFA38YBR159W MTC1P47018 478 aaKnown RBP16.13■□□□□ 0.17
IFA38YBR159W DRS1P32892 752 aaKnown RBP15.73■□□□□ 0.11
IFA38YBR159W FAP1P53971 965 aa13.86□□□□□ -0.19
IFA38YBR159W DIP2Q12220 943 aaPredicted RBP13.56□□□□□ -0.24
IFA38YBR159W BFR2Q06631 534 aaKnown RBP13.38□□□□□ -0.27
IFA38YBR159W PRI1P10363 409 aa13.25□□□□□ -0.29
IFA38YBR159W ISW2Q08773 1120 aa13.24□□□□□ -0.29
IFA38YBR159W AVT3P36062 692 aa13.23□□□□□ -0.29
IFA38YBR159W RPG1P38249 964 aaKnown RBP13.1□□□□□ -0.31
IFA38YBR159W AAD16Q02895 342 aa13.09□□□□□ -0.31
IFA38YBR159W PRY3P47033 881 aa13.06□□□□□ -0.32
IFA38YBR159W RSE1Q04693 1361 aaKnown RBP12.92□□□□□ -0.34
IFA38YBR159W TSR3Q12094 313 aaKnown RBP12.59□□□□□ -0.39
IFA38YBR159W RPL17AP05740 184 aaKnown RBP12.49□□□□□ -0.41
IFA38YBR159W RPL17BP46990 184 aaKnown RBP12.49□□□□□ -0.41
IFA38YBR159W REB1P21538 810 aa12.37□□□□□ -0.43
IFA38YBR159W YCK3P39962 524 aa12.26□□□□□ -0.45
IFA38YBR159W TFA1P36100 482 aa12.21□□□□□ -0.45
IFA38YBR159W HAA1Q12753 694 aaKnown RBP12.18□□□□□ -0.46
IFA38YBR159W MRPL32P25348 183 aa12.07□□□□□ -0.48
IFA38YBR159W SPT21P35209 758 aa11.96□□□□□ -0.49
IFA38YBR159W YKR023WP36119 530 aaKnown RBP11.71□□□□□ -0.53
IFA38YBR159W RIM101P33400 625 aa11.68□□□□□ -0.54
IFA38YBR159W CDC27P38042 758 aa11.59□□□□□ -0.55
IFA38YBR159W HOP09932 586 aa11.49□□□□□ -0.57
IFA38YBR159W TFC8Q12308 588 aa11.46□□□□□ -0.57
IFA38YBR159W DCD1P06773 312 aa11.44□□□□□ -0.58
IFA38YBR159W YGL015CP33199 130 aa11.38□□□□□ -0.59
IFA38YBR159W OXP1P28273 1286 aa11.33□□□□□ -0.6
IFA38YBR159W YIL055CP40523 627 aaKnown RBP11.18□□□□□ -0.62
IFA38YBR159W MAP2P38174 421 aaKnown RBP11.16□□□□□ -0.62
IFA38YBR159W PTP3P40048 928 aa11.16□□□□□ -0.62
IFA38YBR159W UBP10P53874 792 aaPredicted RBP11.13□□□□□ -0.63
IFA38YBR159W YAH1Q12184 172 aaKnown RBP11.13□□□□□ -0.63
IFA38YBR159W BCH2P36122 765 aa11.12□□□□□ -0.63
IFA38YBR159W SCY1P53009 804 aa11.06□□□□□ -0.64
IFA38YBR159W RSM7P47150 247 aa10.99□□□□□ -0.65
IFA38YBR159W SSP1P38871 571 aa10.95□□□□□ -0.66
IFA38YBR159W YLR271WQ06152 274 aa10.93□□□□□ -0.66
IFA38YBR159W EPS1P40557 701 aa10.89□□□□□ -0.67
IFA38YBR159W SLX5P32828 619 aaKnown RBP10.86□□□□□ -0.67
IFA38YBR159W AI2P03876 854 aa10.85□□□□□ -0.67
IFA38YBR159W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.83□□□□□ -0.68not detected
IFA38YBR159W BDF1P35817 686 aa10.82□□□□□ -0.68
IFA38YBR159W BBC1P47068 1157 aa10.81□□□□□ -0.68
IFA38YBR159W BUD31P25337 157 aaPredicted RBP10.8□□□□□ -0.68
IFA38YBR159W TIF4632P39936 914 aaKnown RBP10.69□□□□□ -0.7
IFA38YBR159W PSD2P53037 1138 aaKnown RBP10.68□□□□□ -0.7
IFA38YBR159W TGL3P40308 642 aa10.62□□□□□ -0.71
IFA38YBR159W MGA2P40578 1113 aa10.61□□□□□ -0.71
IFA38YBR159W CST9Q06032 482 aa10.59□□□□□ -0.71
IFA38YBR159W MRM1P25270 412 aa10.5□□□□□ -0.73
IFA38YBR159W NSR1P27476 414 aaKnown RBP RIP-Chip data10.31□□□□□ -0.76not detected
IFA38YBR159W RTG3P38165 486 aa10.3□□□□□ -0.76
IFA38YBR159W YAP5P40574 245 aa10.3□□□□□ -0.76
IFA38YBR159W RCR1P38212 213 aa10.29□□□□□ -0.76
IFA38YBR159W YOR238WQ08634 303 aa10.28□□□□□ -0.76
IFA38YBR159W MST1P07236 462 aa10.23□□□□□ -0.77
IFA38YBR159W VPS29P38759 282 aa10.23□□□□□ -0.77
IFA38YBR159W SGS1P35187 1447 aa10.2□□□□□ -0.78
IFA38YBR159W PIB1Q06651 286 aa10.2□□□□□ -0.78
IFA38YBR159W YMR1P47147 688 aaKnown RBP RIP-Chip data10.18□□□□□ -0.78not detected
IFA38YBR159W YFR006WP43590 535 aa10.14□□□□□ -0.79
IFA38YBR159W DBP1P24784 617 aaKnown RBP10.13□□□□□ -0.79
IFA38YBR159W SIS1P25294 352 aaKnown RBP10.12□□□□□ -0.79
IFA38YBR159W RAM2P29703 316 aa10.12□□□□□ -0.79
IFA38YBR159W STS1P38637 319 aa10.12□□□□□ -0.79
IFA38YBR159W UBP9P39967 754 aa10.11□□□□□ -0.79
IFA38YBR159W INO80P53115 1489 aa10.1□□□□□ -0.79
IFA38YBR159W GTT3P39996 337 aa10.06□□□□□ -0.8
IFA38YBR159W YBL029C-AQ3E756 94 aa10.03□□□□□ -0.8
IFA38YBR159W WSC3Q12215 556 aa10□□□□□ -0.81
IFA38YBR159W MAK11P20484 414 aaKnown RBP9.99□□□□□ -0.81
IFA38YBR159W SPA2P23201 1466 aaKnown RBP9.98□□□□□ -0.81
IFA38YBR159W VMA1P17255 1071 aaKnown RBP9.96□□□□□ -0.82
IFA38YBR159W VNX1P42839 908 aa9.92□□□□□ -0.82
IFA38YBR159W MIF2P35201 549 aa9.9□□□□□ -0.82
IFA38YBR159W DMA1P38823 416 aa9.89□□□□□ -0.83
IFA38YBR159W COQ8P27697 501 aa9.87□□□□□ -0.83
IFA38YBR159W TCB3Q03640 1545 aaKnown RBP9.87□□□□□ -0.83
IFA38YBR159W SPP1Q03012 353 aa9.86□□□□□ -0.83
IFA38YBR159W EDS1P38073 919 aa9.85□□□□□ -0.83
IFA38YBR159W SET4P42948 560 aa9.85□□□□□ -0.83
IFA38YBR159W YOL036WQ08206 761 aa9.85□□□□□ -0.83
IFA38YBR159W SAM3Q08986 587 aa9.85□□□□□ -0.83
IFA38YBR159W TIF11P38912 153 aaKnown RBP9.8□□□□□ -0.84
IFA38YBR159W MSB4Q12317 492 aa9.8□□□□□ -0.84
IFA38YBR159W SSN2P38931 1420 aa9.8□□□□□ -0.84
IFA38YBR159W PTC3P34221 468 aaKnown RBP9.78□□□□□ -0.84
IFA38YBR159W SET1P38827 1080 aaKnown RBP9.78□□□□□ -0.84
IFA38YBR159W GYP5Q12344 894 aa9.78□□□□□ -0.84
IFA38YBR159W RQC2Q12532 1038 aaKnown RBP9.76□□□□□ -0.85
IFA38YBR159W ULI1P43604 169 aa9.75□□□□□ -0.85
IFA38YBR159W GRE2Q12068 342 aaKnown RBP9.73□□□□□ -0.85
IFA38YBR159W EAP1P36041 632 aaKnown RBP9.72□□□□□ -0.85
IFA38YBR159W DCW1P36091 449 aa9.7□□□□□ -0.86
IFA38YBR159W NOP53Q12080 455 aaKnown RBP9.7□□□□□ -0.86
IFA38YBR159W TRP5P00931 707 aaKnown RBP9.69□□□□□ -0.86
IFA38YBR159W ATH1P48016 1211 aa9.69□□□□□ -0.86
IFA38YBR159W ABP1P15891 592 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms