RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C MTC1P47018 478 aaKnown RBP13.33□□□□□ -0.28
RPB5YBR154C DRS1P32892 752 aaKnown RBP12.51□□□□□ -0.41
RPB5YBR154C FAP1P53971 965 aa11.98□□□□□ -0.49
RPB5YBR154C PRY3P47033 881 aa11.24□□□□□ -0.61
RPB5YBR154C PRI1P10363 409 aa11.2□□□□□ -0.62
RPB5YBR154C AAD16Q02895 342 aa11.16□□□□□ -0.62
RPB5YBR154C ISW2Q08773 1120 aa11.1□□□□□ -0.63
RPB5YBR154C DIP2Q12220 943 aaPredicted RBP10.95□□□□□ -0.66
RPB5YBR154C RPG1P38249 964 aaKnown RBP10.92□□□□□ -0.66
RPB5YBR154C YCK3P39962 524 aa10.67□□□□□ -0.7
RPB5YBR154C RSE1Q04693 1361 aaKnown RBP10.6□□□□□ -0.71
RPB5YBR154C TSR3Q12094 313 aaKnown RBP10.59□□□□□ -0.71
RPB5YBR154C HAA1Q12753 694 aaKnown RBP10.58□□□□□ -0.72
RPB5YBR154C AVT3P36062 692 aa10.53□□□□□ -0.72
RPB5YBR154C BFR2Q06631 534 aaKnown RBP10.44□□□□□ -0.74
RPB5YBR154C REB1P21538 810 aa10.23□□□□□ -0.77
RPB5YBR154C MRPL32P25348 183 aa10.23□□□□□ -0.77
RPB5YBR154C RPL17AP05740 184 aaKnown RBP10.22□□□□□ -0.77
RPB5YBR154C RPL17BP46990 184 aaKnown RBP10.22□□□□□ -0.77
RPB5YBR154C YGL015CP33199 130 aa9.81□□□□□ -0.84
RPB5YBR154C SPT21P35209 758 aa9.75□□□□□ -0.85
RPB5YBR154C CDC27P38042 758 aa9.67□□□□□ -0.86
RPB5YBR154C YKR023WP36119 530 aaKnown RBP9.63□□□□□ -0.87
RPB5YBR154C TFC8Q12308 588 aa9.46□□□□□ -0.9
RPB5YBR154C HOP09932 586 aa9.45□□□□□ -0.9
RPB5YBR154C UBP10P53874 792 aaPredicted RBP9.45□□□□□ -0.9
RPB5YBR154C RIM101P33400 625 aa9.44□□□□□ -0.9
RPB5YBR154C DCD1P06773 312 aa9.42□□□□□ -0.9
RPB5YBR154C MAP2P38174 421 aaKnown RBP9.36□□□□□ -0.91
RPB5YBR154C SCY1P53009 804 aa9.2□□□□□ -0.94
RPB5YBR154C TFA1P36100 482 aa9.19□□□□□ -0.94
RPB5YBR154C BCH2P36122 765 aa9.14□□□□□ -0.95
RPB5YBR154C SLX5P32828 619 aaKnown RBP9.11□□□□□ -0.95
RPB5YBR154C TIF4632P39936 914 aaKnown RBP9.11□□□□□ -0.95
RPB5YBR154C OXP1P28273 1286 aa9.08□□□□□ -0.96
RPB5YBR154C YIL055CP40523 627 aaKnown RBP9.07□□□□□ -0.96
RPB5YBR154C PTP3P40048 928 aa9.04□□□□□ -0.96
RPB5YBR154C TGL3P40308 642 aa9.02□□□□□ -0.97
RPB5YBR154C BUD31P25337 157 aaPredicted RBP8.93□□□□□ -0.98
RPB5YBR154C EPS1P40557 701 aa8.93□□□□□ -0.98
RPB5YBR154C BDF1P35817 686 aa8.89□□□□□ -0.99
RPB5YBR154C RSM7P47150 247 aa8.89□□□□□ -0.99
RPB5YBR154C BBC1P47068 1157 aa8.87□□□□□ -0.99
RPB5YBR154C YAH1Q12184 172 aaKnown RBP8.87□□□□□ -0.99
RPB5YBR154C AI2P03876 854 aa8.8□□□□□ -1
RPB5YBR154C UBP9P39967 754 aa8.79□□□□□ -1
RPB5YBR154C YLR271WQ06152 274 aa8.71□□□□□ -1.02
RPB5YBR154C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.66□□□□□ -1.02not detected
RPB5YBR154C NSR1P27476 414 aaKnown RBP RIP-Chip data8.65□□□□□ -1.02not detected
RPB5YBR154C SSP1P38871 571 aa8.65□□□□□ -1.02
RPB5YBR154C YOR238WQ08634 303 aa8.64□□□□□ -1.03
RPB5YBR154C MST1P07236 462 aa8.61□□□□□ -1.03
RPB5YBR154C YAP5P40574 245 aa8.59□□□□□ -1.03
RPB5YBR154C PSD2P53037 1138 aaKnown RBP8.59□□□□□ -1.03
RPB5YBR154C SIS1P25294 352 aaKnown RBP8.54□□□□□ -1.04
RPB5YBR154C MRM1P25270 412 aa8.47□□□□□ -1.05
RPB5YBR154C MGA2P40578 1113 aa8.46□□□□□ -1.06
RPB5YBR154C YBL029C-AQ3E756 94 aa8.46□□□□□ -1.06
RPB5YBR154C GTT3P39996 337 aa8.42□□□□□ -1.06
RPB5YBR154C VNX1P42839 908 aa8.39□□□□□ -1.07
RPB5YBR154C CST9Q06032 482 aa8.39□□□□□ -1.07
RPB5YBR154C WSC3Q12215 556 aa8.36□□□□□ -1.07
RPB5YBR154C SPP1Q03012 353 aa8.35□□□□□ -1.07
RPB5YBR154C RTG3P38165 486 aa8.34□□□□□ -1.07
RPB5YBR154C PIB1Q06651 286 aa8.32□□□□□ -1.08
RPB5YBR154C YMR1P47147 688 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
RPB5YBR154C TIF11P38912 153 aaKnown RBP8.27□□□□□ -1.09
RPB5YBR154C DBP1P24784 617 aaKnown RBP8.25□□□□□ -1.09
RPB5YBR154C VPS29P38759 282 aa8.25□□□□□ -1.09
RPB5YBR154C MSB4Q12317 492 aa8.22□□□□□ -1.09
RPB5YBR154C EAP1P36041 632 aaKnown RBP8.18□□□□□ -1.1
RPB5YBR154C YFR006WP43590 535 aa8.18□□□□□ -1.1
RPB5YBR154C ULI1P43604 169 aa8.18□□□□□ -1.1
RPB5YBR154C RCR1P38212 213 aa8.17□□□□□ -1.1
RPB5YBR154C STS1P38637 319 aa8.17□□□□□ -1.1
RPB5YBR154C VMA1P17255 1071 aaKnown RBP8.15□□□□□ -1.1
RPB5YBR154C YOL036WQ08206 761 aa8.14□□□□□ -1.11
RPB5YBR154C SET4P42948 560 aa8.13□□□□□ -1.11
RPB5YBR154C LDB19Q12502 818 aa8.13□□□□□ -1.11
RPB5YBR154C FKH1P40466 484 aa8.12□□□□□ -1.11
RPB5YBR154C YJL171CP46992 396 aa8.11□□□□□ -1.11
RPB5YBR154C IOC2Q12072 812 aa8.11□□□□□ -1.11
RPB5YBR154C SAM3Q08986 587 aa8.1□□□□□ -1.11
RPB5YBR154C AIR2Q12476 344 aaKnown RBP8.1□□□□□ -1.11
RPB5YBR154C ABP1P15891 592 aaKnown RBP8.06□□□□□ -1.12
RPB5YBR154C TRP5P00931 707 aaKnown RBP8.04□□□□□ -1.12
RPB5YBR154C RTG1P32607 177 aa8.01□□□□□ -1.13
RPB5YBR154C GYP5Q12344 894 aa8.01□□□□□ -1.13
RPB5YBR154C MAK11P20484 414 aaKnown RBP8□□□□□ -1.13
RPB5YBR154C YNL035CP53962 389 aaKnown RBP8□□□□□ -1.13
RPB5YBR154C BMT6Q12291 365 aa7.99□□□□□ -1.13
RPB5YBR154C SEC61P32915 480 aa7.98□□□□□ -1.13
RPB5YBR154C RAM2P29703 316 aa7.97□□□□□ -1.13
RPB5YBR154C NCR1Q12200 1170 aa7.97□□□□□ -1.13
RPB5YBR154C HTA1P04911 132 aaKnown RBP7.96□□□□□ -1.14
RPB5YBR154C HTA2P04912 132 aa7.96□□□□□ -1.14
RPB5YBR154C TFG1P41895 735 aaPredicted RBP7.95□□□□□ -1.14
RPB5YBR154C JIP4Q03361 876 aa7.95□□□□□ -1.14
RPB5YBR154C MIF2P35201 549 aa7.94□□□□□ -1.14
RPB5YBR154C DCW1P36091 449 aa7.93□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms