RNA–Protein interactions for RNA: YBR149W

ARA1, Transcript of NADP+ dependent arabinose dehydrogenase, yeastyeast

Gene ARA1, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ARA1YBR149W MTC1P47018 478 aaKnown RBP17.05■□□□□ 0.32
ARA1YBR149W FAP1P53971 965 aa16.31■□□□□ 0.2
ARA1YBR149W PRY3P47033 881 aa15.34■□□□□ 0.05
ARA1YBR149W DRS1P32892 752 aaKnown RBP15.17■□□□□ 0.02
ARA1YBR149W AAD16Q02895 342 aa14.84□□□□□ -0.03
ARA1YBR149W PRI1P10363 409 aa14.82□□□□□ -0.04
ARA1YBR149W YCK3P39962 524 aa14.42□□□□□ -0.1
ARA1YBR149W ISW2Q08773 1120 aa14.32□□□□□ -0.12
ARA1YBR149W HAA1Q12753 694 aaKnown RBP14.31□□□□□ -0.12
ARA1YBR149W RPG1P38249 964 aaKnown RBP14.21□□□□□ -0.13
ARA1YBR149W TSR3Q12094 313 aaKnown RBP14□□□□□ -0.17
ARA1YBR149W DIP2Q12220 943 aaPredicted RBP13.59□□□□□ -0.23
ARA1YBR149W MRPL32P25348 183 aa13.45□□□□□ -0.26
ARA1YBR149W RSE1Q04693 1361 aaKnown RBP13.34□□□□□ -0.27
ARA1YBR149W YGL015CP33199 130 aa13.11□□□□□ -0.31
ARA1YBR149W REB1P21538 810 aa13.01□□□□□ -0.33
ARA1YBR149W RPL17AP05740 184 aaKnown RBP12.98□□□□□ -0.33
ARA1YBR149W RPL17BP46990 184 aaKnown RBP12.98□□□□□ -0.33
ARA1YBR149W AVT3P36062 692 aa12.84□□□□□ -0.35
ARA1YBR149W CDC27P38042 758 aa12.62□□□□□ -0.39
ARA1YBR149W YKR023WP36119 530 aaKnown RBP12.4□□□□□ -0.42
ARA1YBR149W BUD31P25337 157 aaPredicted RBP12.34□□□□□ -0.43
ARA1YBR149W UBP10P53874 792 aaPredicted RBP12.34□□□□□ -0.43
ARA1YBR149W MAP2P38174 421 aaKnown RBP12.33□□□□□ -0.44
ARA1YBR149W SPT21P35209 758 aa12.32□□□□□ -0.44
ARA1YBR149W BFR2Q06631 534 aaKnown RBP12.22□□□□□ -0.45
ARA1YBR149W HOP09932 586 aa12.17□□□□□ -0.46
ARA1YBR149W DCD1P06773 312 aa12.15□□□□□ -0.46
ARA1YBR149W TFC8Q12308 588 aa12.13□□□□□ -0.47
ARA1YBR149W SCY1P53009 804 aa11.95□□□□□ -0.5
ARA1YBR149W TIF4632P39936 914 aaKnown RBP11.87□□□□□ -0.51
ARA1YBR149W SLX5P32828 619 aaKnown RBP11.83□□□□□ -0.52
ARA1YBR149W TGL3P40308 642 aa11.81□□□□□ -0.52
ARA1YBR149W RIM101P33400 625 aa11.75□□□□□ -0.53
ARA1YBR149W BCH2P36122 765 aa11.72□□□□□ -0.53
ARA1YBR149W SIS1P25294 352 aaKnown RBP11.71□□□□□ -0.53
ARA1YBR149W UBP9P39967 754 aa11.7□□□□□ -0.54
ARA1YBR149W EPS1P40557 701 aa11.37□□□□□ -0.59
ARA1YBR149W BDF1P35817 686 aa11.35□□□□□ -0.59
ARA1YBR149W OXP1P28273 1286 aa11.33□□□□□ -0.6
ARA1YBR149W PTP3P40048 928 aa11.22□□□□□ -0.61
ARA1YBR149W MST1P07236 462 aa11.21□□□□□ -0.61
ARA1YBR149W YBL029C-AQ3E756 94 aa11.2□□□□□ -0.62
ARA1YBR149W YIL055CP40523 627 aaKnown RBP11.19□□□□□ -0.62
ARA1YBR149W YOR238WQ08634 303 aa11.17□□□□□ -0.62
ARA1YBR149W VNX1P42839 908 aa11.03□□□□□ -0.64
ARA1YBR149W BBC1P47068 1157 aa11.03□□□□□ -0.64
ARA1YBR149W NSR1P27476 414 aaKnown RBP RIP-Chip data11.01□□□□□ -0.65not detected
ARA1YBR149W RSM7P47150 247 aa11.01□□□□□ -0.65
ARA1YBR149W AI2P03876 854 aa10.97□□□□□ -0.65
ARA1YBR149W YAP5P40574 245 aa10.97□□□□□ -0.65
ARA1YBR149W SPP1Q03012 353 aa10.94□□□□□ -0.66
ARA1YBR149W YAH1Q12184 172 aaKnown RBP10.93□□□□□ -0.66
ARA1YBR149W WSC3Q12215 556 aa10.92□□□□□ -0.66
ARA1YBR149W TIF11P38912 153 aaKnown RBP10.77□□□□□ -0.69
ARA1YBR149W GTT3P39996 337 aa10.77□□□□□ -0.69
ARA1YBR149W AIR2Q12476 344 aaKnown RBP10.76□□□□□ -0.69
ARA1YBR149W YJL171CP46992 396 aa10.73□□□□□ -0.69
ARA1YBR149W TFA1P36100 482 aa10.71□□□□□ -0.69
ARA1YBR149W FKH1P40466 484 aa10.69□□□□□ -0.7
ARA1YBR149W YLR271WQ06152 274 aa10.67□□□□□ -0.7
ARA1YBR149W PIB1Q06651 286 aa10.65□□□□□ -0.7
ARA1YBR149W LDB19Q12502 818 aa10.62□□□□□ -0.71
ARA1YBR149W ULI1P43604 169 aa10.6□□□□□ -0.71
ARA1YBR149W PSD2P53037 1138 aaKnown RBP10.59□□□□□ -0.71
ARA1YBR149W IOC2Q12072 812 aa10.57□□□□□ -0.72
ARA1YBR149W MRM1P25270 412 aa10.55□□□□□ -0.72
ARA1YBR149W BMT6Q12291 365 aa10.51□□□□□ -0.73
ARA1YBR149W MSB4Q12317 492 aa10.44□□□□□ -0.74
ARA1YBR149W EAP1P36041 632 aaKnown RBP10.41□□□□□ -0.74
ARA1YBR149W SET4P42948 560 aa10.39□□□□□ -0.75
ARA1YBR149W YOL036WQ08206 761 aa10.37□□□□□ -0.75
ARA1YBR149W RTG1P32607 177 aa10.36□□□□□ -0.75
ARA1YBR149W TRP5P00931 707 aaKnown RBP10.35□□□□□ -0.75
ARA1YBR149W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.35□□□□□ -0.75not detected
ARA1YBR149W YMR1P47147 688 aaKnown RBP RIP-Chip data10.34□□□□□ -0.75not detected
ARA1YBR149W SSP1P38871 571 aa10.33□□□□□ -0.76
ARA1YBR149W DBP1P24784 617 aaKnown RBP10.32□□□□□ -0.76
ARA1YBR149W NCR1Q12200 1170 aa10.32□□□□□ -0.76
ARA1YBR149W VPS29P38759 282 aa10.31□□□□□ -0.76
ARA1YBR149W YFR006WP43590 535 aa10.3□□□□□ -0.76
ARA1YBR149W CST9Q06032 482 aa10.27□□□□□ -0.77
ARA1YBR149W RTG3P38165 486 aa10.26□□□□□ -0.77
ARA1YBR149W YNL035CP53962 389 aaKnown RBP10.25□□□□□ -0.77
ARA1YBR149W VMA1P17255 1071 aaKnown RBP10.24□□□□□ -0.77
ARA1YBR149W SEC61P32915 480 aa10.23□□□□□ -0.77
ARA1YBR149W STS1P38637 319 aa10.21□□□□□ -0.77
ARA1YBR149W SAM3Q08986 587 aa10.18□□□□□ -0.78
ARA1YBR149W MGA2P40578 1113 aa10.17□□□□□ -0.78
ARA1YBR149W TFG1P41895 735 aaPredicted RBP10.14□□□□□ -0.79
ARA1YBR149W RCR1P38212 213 aa10.1□□□□□ -0.79
ARA1YBR149W SAP30P38429 201 aa10.08□□□□□ -0.8
ARA1YBR149W DAN4P47179 1161 aa10.07□□□□□ -0.8
ARA1YBR149W JIP4Q03361 876 aa10.05□□□□□ -0.8
ARA1YBR149W GYP5Q12344 894 aa10.04□□□□□ -0.8
ARA1YBR149W ABP1P15891 592 aaKnown RBP10□□□□□ -0.81
ARA1YBR149W YDL129WQ07555 291 aa10□□□□□ -0.81
ARA1YBR149W DCW1P36091 449 aa9.99□□□□□ -0.81
ARA1YBR149W HTA1P04911 132 aaKnown RBP9.98□□□□□ -0.81
ARA1YBR149W HTA2P04912 132 aa9.98□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms