RNA–Protein interactions for RNA: YBR078W

ECM33, Transcript of GPI-anchored protein of unknown function, yeastyeast

Gene ECM33, Length 1,290 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM33YBR078W MTC1P47018 478 aaKnown RBP13.6□□□□□ -0.23
ECM33YBR078W FAP1P53971 965 aa13.51□□□□□ -0.25
ECM33YBR078W PRY3P47033 881 aa12.74□□□□□ -0.37
ECM33YBR078W AAD16Q02895 342 aa12.16□□□□□ -0.46
ECM33YBR078W PRI1P10363 409 aa12.09□□□□□ -0.47
ECM33YBR078W YCK3P39962 524 aa12.01□□□□□ -0.49
ECM33YBR078W HAA1Q12753 694 aaKnown RBP11.87□□□□□ -0.51
ECM33YBR078W DRS1P32892 752 aaKnown RBP11.6□□□□□ -0.55
ECM33YBR078W ISW2Q08773 1120 aa11.51□□□□□ -0.57
ECM33YBR078W RPG1P38249 964 aaKnown RBP11.43□□□□□ -0.58
ECM33YBR078W TSR3Q12094 313 aaKnown RBP11.38□□□□□ -0.59
ECM33YBR078W MRPL32P25348 183 aa10.92□□□□□ -0.66
ECM33YBR078W YGL015CP33199 130 aa10.78□□□□□ -0.68
ECM33YBR078W DIP2Q12220 943 aaPredicted RBP10.57□□□□□ -0.72
ECM33YBR078W RSE1Q04693 1361 aaKnown RBP10.52□□□□□ -0.73
ECM33YBR078W BUD31P25337 157 aaPredicted RBP10.37□□□□□ -0.75
ECM33YBR078W REB1P21538 810 aa10.32□□□□□ -0.76
ECM33YBR078W RPL17AP05740 184 aaKnown RBP10.27□□□□□ -0.77
ECM33YBR078W RPL17BP46990 184 aaKnown RBP10.27□□□□□ -0.77
ECM33YBR078W CDC27P38042 758 aa10.19□□□□□ -0.78
ECM33YBR078W UBP10P53874 792 aaPredicted RBP10.02□□□□□ -0.81
ECM33YBR078W MAP2P38174 421 aaKnown RBP10□□□□□ -0.81
ECM33YBR078W YKR023WP36119 530 aaKnown RBP9.9□□□□□ -0.82
ECM33YBR078W AVT3P36062 692 aa9.87□□□□□ -0.83
ECM33YBR078W SIS1P25294 352 aaKnown RBP9.78□□□□□ -0.84
ECM33YBR078W SPT21P35209 758 aa9.74□□□□□ -0.85
ECM33YBR078W DCD1P06773 312 aa9.71□□□□□ -0.86
ECM33YBR078W HOP09932 586 aa9.71□□□□□ -0.86
ECM33YBR078W TFC8Q12308 588 aa9.69□□□□□ -0.86
ECM33YBR078W UBP9P39967 754 aa9.64□□□□□ -0.87
ECM33YBR078W TIF4632P39936 914 aaKnown RBP9.62□□□□□ -0.87
ECM33YBR078W TGL3P40308 642 aa9.6□□□□□ -0.87
ECM33YBR078W SCY1P53009 804 aa9.6□□□□□ -0.87
ECM33YBR078W SLX5P32828 619 aaKnown RBP9.53□□□□□ -0.88
ECM33YBR078W BCH2P36122 765 aa9.34□□□□□ -0.91
ECM33YBR078W RIM101P33400 625 aa9.16□□□□□ -0.94
ECM33YBR078W YBL029C-AQ3E756 94 aa9.12□□□□□ -0.95
ECM33YBR078W BFR2Q06631 534 aaKnown RBP9.1□□□□□ -0.95
ECM33YBR078W MST1P07236 462 aa9.07□□□□□ -0.96
ECM33YBR078W BDF1P35817 686 aa9.02□□□□□ -0.97
ECM33YBR078W EPS1P40557 701 aa9.01□□□□□ -0.97
ECM33YBR078W YOR238WQ08634 303 aa8.98□□□□□ -0.97
ECM33YBR078W VNX1P42839 908 aa8.96□□□□□ -0.98
ECM33YBR078W SPP1Q03012 353 aa8.88□□□□□ -0.99
ECM33YBR078W NSR1P27476 414 aaKnown RBP RIP-Chip data8.83□□□□□ -1not detected
ECM33YBR078W OXP1P28273 1286 aa8.82□□□□□ -1
ECM33YBR078W WSC3Q12215 556 aa8.81□□□□□ -1
ECM33YBR078W AIR2Q12476 344 aaKnown RBP8.81□□□□□ -1
ECM33YBR078W YJL171CP46992 396 aa8.78□□□□□ -1
ECM33YBR078W YAP5P40574 245 aa8.76□□□□□ -1.01
ECM33YBR078W FKH1P40466 484 aa8.74□□□□□ -1.01
ECM33YBR078W PTP3P40048 928 aa8.73□□□□□ -1.01
ECM33YBR078W TIF11P38912 153 aaKnown RBP8.71□□□□□ -1.02
ECM33YBR078W YIL055CP40523 627 aaKnown RBP8.68□□□□□ -1.02
ECM33YBR078W BBC1P47068 1157 aa8.65□□□□□ -1.02
ECM33YBR078W GTT3P39996 337 aa8.6□□□□□ -1.03
ECM33YBR078W LDB19Q12502 818 aa8.6□□□□□ -1.03
ECM33YBR078W AI2P03876 854 aa8.58□□□□□ -1.04
ECM33YBR078W RSM7P47150 247 aa8.56□□□□□ -1.04
ECM33YBR078W BMT6Q12291 365 aa8.56□□□□□ -1.04
ECM33YBR078W ULI1P43604 169 aa8.54□□□□□ -1.04
ECM33YBR078W IOC2Q12072 812 aa8.53□□□□□ -1.04
ECM33YBR078W PIB1Q06651 286 aa8.44□□□□□ -1.06
ECM33YBR078W YAH1Q12184 172 aaKnown RBP8.42□□□□□ -1.06
ECM33YBR078W RQC2Q12532 1038 aaKnown RBP8.42□□□□□ -1.06
ECM33YBR078W MSB4Q12317 492 aa8.35□□□□□ -1.07
ECM33YBR078W RTG1P32607 177 aa8.33□□□□□ -1.08
ECM33YBR078W EAP1P36041 632 aaKnown RBP8.33□□□□□ -1.08
ECM33YBR078W NCR1Q12200 1170 aa8.31□□□□□ -1.08
ECM33YBR078W TRP5P00931 707 aaKnown RBP8.27□□□□□ -1.09
ECM33YBR078W SET4P42948 560 aa8.27□□□□□ -1.09
ECM33YBR078W YOL036WQ08206 761 aa8.26□□□□□ -1.09
ECM33YBR078W SEC61P32915 480 aa8.22□□□□□ -1.09
ECM33YBR078W PSD2P53037 1138 aaKnown RBP8.22□□□□□ -1.09
ECM33YBR078W YNL035CP53962 389 aaKnown RBP8.22□□□□□ -1.09
ECM33YBR078W YLR271WQ06152 274 aa8.22□□□□□ -1.09
ECM33YBR078W MRM1P25270 412 aa8.21□□□□□ -1.1
ECM33YBR078W BCK2P33306 851 aa8.13□□□□□ -1.11
ECM33YBR078W TFG1P41895 735 aaPredicted RBP8.11□□□□□ -1.11
ECM33YBR078W SAP30P38429 201 aa8.1□□□□□ -1.11
ECM33YBR078W DBP1P24784 617 aaKnown RBP8.09□□□□□ -1.11
ECM33YBR078W YMR1P47147 688 aaKnown RBP RIP-Chip data8.09□□□□□ -1.11not detected
ECM33YBR078W VMA1P17255 1071 aaKnown RBP8.07□□□□□ -1.12
ECM33YBR078W YFR006WP43590 535 aa8.07□□□□□ -1.12
ECM33YBR078W VPS29P38759 282 aa8.05□□□□□ -1.12
ECM33YBR078W SAM3Q08986 587 aa8.05□□□□□ -1.12
ECM33YBR078W CHL1P22516 861 aaPredicted RBP8.04□□□□□ -1.12
ECM33YBR078W DAN4P47179 1161 aa8.04□□□□□ -1.12
ECM33YBR078W YDL129WQ07555 291 aa8.01□□□□□ -1.13
ECM33YBR078W STS1P38637 319 aa8□□□□□ -1.13
ECM33YBR078W JIP4Q03361 876 aa7.99□□□□□ -1.13
ECM33YBR078W PRE3P38624 215 aa7.98□□□□□ -1.13
ECM33YBR078W RTG3P38165 486 aa7.95□□□□□ -1.14
ECM33YBR078W GYP5Q12344 894 aa7.9□□□□□ -1.14
ECM33YBR078W ABP1P15891 592 aaKnown RBP7.89□□□□□ -1.15
ECM33YBR078W HTA1P04911 132 aaKnown RBP7.88□□□□□ -1.15
ECM33YBR078W HTA2P04912 132 aa7.88□□□□□ -1.15
ECM33YBR078W CST9Q06032 482 aa7.88□□□□□ -1.15
ECM33YBR078W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.88□□□□□ -1.15not detected
ECM33YBR078W XDJ1P39102 459 aa7.87□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms