RNA–Protein interactions for RNA: YBL084C

CDC27, Transcript of Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), yeastyeast

Gene CDC27, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC27YBL084C MTC1P47018 478 aaKnown RBP8.29□□□□□ -1.08
CDC27YBL084C DRS1P32892 752 aaKnown RBP7.64□□□□□ -1.19
CDC27YBL084C FAP1P53971 965 aa7.6□□□□□ -1.19
CDC27YBL084C PRY3P47033 881 aa7.21□□□□□ -1.25
CDC27YBL084C PRI1P10363 409 aa7.05□□□□□ -1.28
CDC27YBL084C AAD16Q02895 342 aa7□□□□□ -1.29
CDC27YBL084C ISW2Q08773 1120 aa6.89□□□□□ -1.31
CDC27YBL084C RPG1P38249 964 aaKnown RBP6.82□□□□□ -1.32
CDC27YBL084C DIP2Q12220 943 aaPredicted RBP6.75□□□□□ -1.33
CDC27YBL084C YCK3P39962 524 aa6.71□□□□□ -1.34
CDC27YBL084C HAA1Q12753 694 aaKnown RBP6.66□□□□□ -1.34
CDC27YBL084C TSR3Q12094 313 aaKnown RBP6.62□□□□□ -1.35
CDC27YBL084C RSE1Q04693 1361 aaKnown RBP6.54□□□□□ -1.36
CDC27YBL084C AVT3P36062 692 aa6.5□□□□□ -1.37
CDC27YBL084C MRPL32P25348 183 aa6.38□□□□□ -1.39
CDC27YBL084C BUD31P25337 157 aaPredicted RBP6.36□□□□□ -1.39
CDC27YBL084C RPL17AP05740 184 aaKnown RBP6.33□□□□□ -1.4
CDC27YBL084C RPL17BP46990 184 aaKnown RBP6.33□□□□□ -1.4
CDC27YBL084C BFR2Q06631 534 aaKnown RBP6.32□□□□□ -1.4
CDC27YBL084C REB1P21538 810 aa6.31□□□□□ -1.4
CDC27YBL084C YGL015CP33199 130 aa6.16□□□□□ -1.42
CDC27YBL084C SPT21P35209 758 aa6.08□□□□□ -1.44
CDC27YBL084C CDC27P38042 758 aa6.05□□□□□ -1.44
CDC27YBL084C YKR023WP36119 530 aaKnown RBP6.02□□□□□ -1.44
CDC27YBL084C SIS1P25294 352 aaKnown RBP5.99□□□□□ -1.45
CDC27YBL084C UBP10P53874 792 aaPredicted RBP5.9□□□□□ -1.46
CDC27YBL084C TFC8Q12308 588 aa5.9□□□□□ -1.46
CDC27YBL084C HOP09932 586 aa5.88□□□□□ -1.47
CDC27YBL084C MAP2P38174 421 aaKnown RBP5.87□□□□□ -1.47
CDC27YBL084C DCD1P06773 312 aa5.85□□□□□ -1.47
CDC27YBL084C RIM101P33400 625 aa5.85□□□□□ -1.47
CDC27YBL084C SCY1P53009 804 aa5.73□□□□□ -1.49
CDC27YBL084C BCH2P36122 765 aa5.71□□□□□ -1.5
CDC27YBL084C SLX5P32828 619 aaKnown RBP5.67□□□□□ -1.5
CDC27YBL084C TIF4632P39936 914 aaKnown RBP5.66□□□□□ -1.5
CDC27YBL084C TGL3P40308 642 aa5.65□□□□□ -1.51
CDC27YBL084C OXP1P28273 1286 aa5.64□□□□□ -1.51
CDC27YBL084C YIL055CP40523 627 aaKnown RBP5.55□□□□□ -1.52
CDC27YBL084C EPS1P40557 701 aa5.55□□□□□ -1.52
CDC27YBL084C BDF1P35817 686 aa5.54□□□□□ -1.52
CDC27YBL084C PTP3P40048 928 aa5.54□□□□□ -1.52
CDC27YBL084C TFA1P36100 482 aa5.51□□□□□ -1.53
CDC27YBL084C UBP9P39967 754 aa5.49□□□□□ -1.53
CDC27YBL084C RSM7P47150 247 aa5.48□□□□□ -1.53
CDC27YBL084C BBC1P47068 1157 aa5.44□□□□□ -1.54
CDC27YBL084C AI2P03876 854 aa5.43□□□□□ -1.54
CDC27YBL084C YAH1Q12184 172 aaKnown RBP5.43□□□□□ -1.54
CDC27YBL084C MST1P07236 462 aa5.42□□□□□ -1.54
CDC27YBL084C NSR1P27476 414 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
CDC27YBL084C YLR271WQ06152 274 aa5.37□□□□□ -1.55
CDC27YBL084C YOR238WQ08634 303 aa5.37□□□□□ -1.55
CDC27YBL084C YAP5P40574 245 aa5.32□□□□□ -1.56
CDC27YBL084C PSD2P53037 1138 aaKnown RBP5.31□□□□□ -1.56
CDC27YBL084C YBL029C-AQ3E756 94 aa5.3□□□□□ -1.56
CDC27YBL084C SSP1P38871 571 aa5.28□□□□□ -1.56
CDC27YBL084C VNX1P42839 908 aa5.27□□□□□ -1.57
CDC27YBL084C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
CDC27YBL084C MRM1P25270 412 aa5.22□□□□□ -1.57
CDC27YBL084C SPP1Q03012 353 aa5.21□□□□□ -1.58
CDC27YBL084C WSC3Q12215 556 aa5.2□□□□□ -1.58
CDC27YBL084C GTT3P39996 337 aa5.18□□□□□ -1.58
CDC27YBL084C MGA2P40578 1113 aa5.17□□□□□ -1.58
CDC27YBL084C CST9Q06032 482 aa5.17□□□□□ -1.58
CDC27YBL084C TIF11P38912 153 aaKnown RBP5.16□□□□□ -1.58
CDC27YBL084C PIB1Q06651 286 aa5.16□□□□□ -1.58
CDC27YBL084C RGA2Q06407 1009 aa5.14□□□□□ -1.59
CDC27YBL084C VPS29P38759 282 aa5.13□□□□□ -1.59
CDC27YBL084C RTG3P38165 486 aa5.12□□□□□ -1.59
CDC27YBL084C YMR1P47147 688 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
CDC27YBL084C AIR2Q12476 344 aaKnown RBP5.1□□□□□ -1.59
CDC27YBL084C DBP1P24784 617 aaKnown RBP5.09□□□□□ -1.59
CDC27YBL084C FKH1P40466 484 aa5.09□□□□□ -1.59
CDC27YBL084C ULI1P43604 169 aa5.09□□□□□ -1.59
CDC27YBL084C IOC2Q12072 812 aa5.09□□□□□ -1.59
CDC27YBL084C MSB4Q12317 492 aa5.09□□□□□ -1.59
CDC27YBL084C LDB19Q12502 818 aa5.08□□□□□ -1.6
CDC27YBL084C STS1P38637 319 aa5.07□□□□□ -1.6
CDC27YBL084C EAP1P36041 632 aaKnown RBP5.06□□□□□ -1.6
CDC27YBL084C RCR1P38212 213 aa5.06□□□□□ -1.6
CDC27YBL084C YFR006WP43590 535 aa5.06□□□□□ -1.6
CDC27YBL084C YJL171CP46992 396 aa5.05□□□□□ -1.6
CDC27YBL084C YOL036WQ08206 761 aa5.05□□□□□ -1.6
CDC27YBL084C VMA1P17255 1071 aaKnown RBP5.04□□□□□ -1.6
CDC27YBL084C SET4P42948 560 aa5.03□□□□□ -1.6
CDC27YBL084C SAM3Q08986 587 aa5.03□□□□□ -1.6
CDC27YBL084C TRP5P00931 707 aaKnown RBP5.01□□□□□ -1.61
CDC27YBL084C BMT6Q12291 365 aa4.99□□□□□ -1.61
CDC27YBL084C RTG1P32607 177 aa4.98□□□□□ -1.61
CDC27YBL084C YNL035CP53962 389 aaKnown RBP4.97□□□□□ -1.61
CDC27YBL084C SEC61P32915 480 aa4.97□□□□□ -1.61
CDC27YBL084C NCR1Q12200 1170 aa4.96□□□□□ -1.62
CDC27YBL084C ABP1P15891 592 aaKnown RBP4.95□□□□□ -1.62
CDC27YBL084C GYP5Q12344 894 aa4.94□□□□□ -1.62
CDC27YBL084C DAN4P47179 1161 aa4.93□□□□□ -1.62
CDC27YBL084C JIP4Q03361 876 aa4.92□□□□□ -1.62
CDC27YBL084C HTA1P04911 132 aaKnown RBP4.9□□□□□ -1.62
CDC27YBL084C HTA2P04912 132 aa4.9□□□□□ -1.62
CDC27YBL084C MAK11P20484 414 aaKnown RBP4.9□□□□□ -1.63
CDC27YBL084C RAM2P29703 316 aa4.9□□□□□ -1.63
CDC27YBL084C DCW1P36091 449 aa4.89□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms