RNA–Protein interactions for RNA: YBL005W-A

YBL005W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YBL005W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBL005W-AYBL005W-A FAP1P53971 965 aa14.41□□□□□ -0.1
YBL005W-AYBL005W-A MTC1P47018 478 aaKnown RBP14.31□□□□□ -0.12
YBL005W-AYBL005W-A PRY3P47033 881 aa13.57□□□□□ -0.24
YBL005W-AYBL005W-A AAD16Q02895 342 aa12.89□□□□□ -0.35
YBL005W-AYBL005W-A PRI1P10363 409 aa12.79□□□□□ -0.36
YBL005W-AYBL005W-A YCK3P39962 524 aa12.67□□□□□ -0.38
YBL005W-AYBL005W-A HAA1Q12753 694 aaKnown RBP12.63□□□□□ -0.39
YBL005W-AYBL005W-A ISW2Q08773 1120 aa12.18□□□□□ -0.46
YBL005W-AYBL005W-A DRS1P32892 752 aaKnown RBP12.12□□□□□ -0.47
YBL005W-AYBL005W-A RPG1P38249 964 aaKnown RBP12.09□□□□□ -0.47
YBL005W-AYBL005W-A TSR3Q12094 313 aaKnown RBP12.05□□□□□ -0.48
YBL005W-AYBL005W-A MRPL32P25348 183 aa11.6□□□□□ -0.55
YBL005W-AYBL005W-A YGL015CP33199 130 aa11.47□□□□□ -0.57
YBL005W-AYBL005W-A DIP2Q12220 943 aaPredicted RBP11.09□□□□□ -0.63
YBL005W-AYBL005W-A RSE1Q04693 1361 aaKnown RBP11.07□□□□□ -0.64
YBL005W-AYBL005W-A BUD31P25337 157 aaPredicted RBP11.04□□□□□ -0.64
YBL005W-AYBL005W-A REB1P21538 810 aa10.91□□□□□ -0.66
YBL005W-AYBL005W-A RPL17AP05740 184 aaKnown RBP10.82□□□□□ -0.68
YBL005W-AYBL005W-A RPL17BP46990 184 aaKnown RBP10.82□□□□□ -0.68
YBL005W-AYBL005W-A CDC27P38042 758 aa10.74□□□□□ -0.69
YBL005W-AYBL005W-A UBP10P53874 792 aaPredicted RBP10.59□□□□□ -0.71
YBL005W-AYBL005W-A MAP2P38174 421 aaKnown RBP10.58□□□□□ -0.72
YBL005W-AYBL005W-A SIS1P25294 352 aaKnown RBP10.45□□□□□ -0.74
YBL005W-AYBL005W-A YKR023WP36119 530 aaKnown RBP10.39□□□□□ -0.75
YBL005W-AYBL005W-A AVT3P36062 692 aa10.33□□□□□ -0.76
YBL005W-AYBL005W-A UBP9P39967 754 aa10.29□□□□□ -0.76
YBL005W-AYBL005W-A TIF4632P39936 914 aaKnown RBP10.23□□□□□ -0.77
YBL005W-AYBL005W-A HOP09932 586 aa10.22□□□□□ -0.77
YBL005W-AYBL005W-A DCD1P06773 312 aa10.21□□□□□ -0.78
YBL005W-AYBL005W-A TFC8Q12308 588 aa10.19□□□□□ -0.78
YBL005W-AYBL005W-A SPT21P35209 758 aa10.18□□□□□ -0.78
YBL005W-AYBL005W-A TGL3P40308 642 aa10.17□□□□□ -0.78
YBL005W-AYBL005W-A SCY1P53009 804 aa10.14□□□□□ -0.79
YBL005W-AYBL005W-A SLX5P32828 619 aaKnown RBP10.08□□□□□ -0.8
YBL005W-AYBL005W-A BCH2P36122 765 aa9.82□□□□□ -0.84
YBL005W-AYBL005W-A BFR2Q06631 534 aaKnown RBP9.75□□□□□ -0.85
YBL005W-AYBL005W-A YBL029C-AQ3E756 94 aa9.65□□□□□ -0.86
YBL005W-AYBL005W-A RIM101P33400 625 aa9.56□□□□□ -0.88
YBL005W-AYBL005W-A MST1P07236 462 aa9.56□□□□□ -0.88
YBL005W-AYBL005W-A YOR238WQ08634 303 aa9.52□□□□□ -0.89
YBL005W-AYBL005W-A VNX1P42839 908 aa9.49□□□□□ -0.89
YBL005W-AYBL005W-A BDF1P35817 686 aa9.48□□□□□ -0.89
YBL005W-AYBL005W-A EPS1P40557 701 aa9.48□□□□□ -0.89
YBL005W-AYBL005W-A SPP1Q03012 353 aa9.42□□□□□ -0.9
YBL005W-AYBL005W-A YJL171CP46992 396 aa9.38□□□□□ -0.91
YBL005W-AYBL005W-A WSC3Q12215 556 aa9.33□□□□□ -0.92
YBL005W-AYBL005W-A AIR2Q12476 344 aaKnown RBP9.31□□□□□ -0.92
YBL005W-AYBL005W-A NSR1P27476 414 aaKnown RBP RIP-Chip data9.29□□□□□ -0.92not detected
YBL005W-AYBL005W-A YAP5P40574 245 aa9.25□□□□□ -0.93
YBL005W-AYBL005W-A FKH1P40466 484 aa9.24□□□□□ -0.93
YBL005W-AYBL005W-A OXP1P28273 1286 aa9.21□□□□□ -0.94
YBL005W-AYBL005W-A TIF11P38912 153 aaKnown RBP9.21□□□□□ -0.94
YBL005W-AYBL005W-A PTP3P40048 928 aa9.18□□□□□ -0.94
YBL005W-AYBL005W-A YIL055CP40523 627 aaKnown RBP9.16□□□□□ -0.94
YBL005W-AYBL005W-A GTT3P39996 337 aa9.12□□□□□ -0.95
YBL005W-AYBL005W-A BBC1P47068 1157 aa9.12□□□□□ -0.95
YBL005W-AYBL005W-A TFA1P36100 482 aa9.11□□□□□ -0.95
YBL005W-AYBL005W-A BMT6Q12291 365 aa9.1□□□□□ -0.95
YBL005W-AYBL005W-A LDB19Q12502 818 aa9.09□□□□□ -0.95
YBL005W-AYBL005W-A ULI1P43604 169 aa9.05□□□□□ -0.96
YBL005W-AYBL005W-A AI2P03876 854 aa9□□□□□ -0.97
YBL005W-AYBL005W-A IOC2Q12072 812 aa9□□□□□ -0.97
YBL005W-AYBL005W-A RSM7P47150 247 aa8.98□□□□□ -0.97
YBL005W-AYBL005W-A PIB1Q06651 286 aa8.89□□□□□ -0.99
YBL005W-AYBL005W-A EAP1P36041 632 aaKnown RBP8.82□□□□□ -1
YBL005W-AYBL005W-A RTG1P32607 177 aa8.81□□□□□ -1
YBL005W-AYBL005W-A YAH1Q12184 172 aaKnown RBP8.81□□□□□ -1
YBL005W-AYBL005W-A NCR1Q12200 1170 aa8.8□□□□□ -1
YBL005W-AYBL005W-A MSB4Q12317 492 aa8.8□□□□□ -1
YBL005W-AYBL005W-A TRP5P00931 707 aaKnown RBP8.72□□□□□ -1.01
YBL005W-AYBL005W-A SET4P42948 560 aa8.72□□□□□ -1.01
YBL005W-AYBL005W-A YOL036WQ08206 761 aa8.69□□□□□ -1.02
YBL005W-AYBL005W-A SEC61P32915 480 aa8.68□□□□□ -1.02
YBL005W-AYBL005W-A YNL035CP53962 389 aaKnown RBP8.68□□□□□ -1.02
YBL005W-AYBL005W-A TFG1P41895 735 aaPredicted RBP8.63□□□□□ -1.03
YBL005W-AYBL005W-A BCK2P33306 851 aa8.62□□□□□ -1.03
YBL005W-AYBL005W-A MRM1P25270 412 aa8.61□□□□□ -1.03
YBL005W-AYBL005W-A YLR271WQ06152 274 aa8.58□□□□□ -1.04
YBL005W-AYBL005W-A PSD2P53037 1138 aaKnown RBP8.57□□□□□ -1.04
YBL005W-AYBL005W-A SAP30P38429 201 aa8.56□□□□□ -1.04
YBL005W-AYBL005W-A CHL1P22516 861 aaPredicted RBP8.52□□□□□ -1.05
YBL005W-AYBL005W-A DBP1P24784 617 aaKnown RBP8.51□□□□□ -1.05
YBL005W-AYBL005W-A YMR1P47147 688 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
YBL005W-AYBL005W-A VMA1P17255 1071 aaKnown RBP8.47□□□□□ -1.05
YBL005W-AYBL005W-A YFR006WP43590 535 aa8.47□□□□□ -1.05
YBL005W-AYBL005W-A YDL129WQ07555 291 aa8.45□□□□□ -1.06
YBL005W-AYBL005W-A PRE3P38624 215 aa8.44□□□□□ -1.06
YBL005W-AYBL005W-A DAN4P47179 1161 aa8.44□□□□□ -1.06
YBL005W-AYBL005W-A JIP4Q03361 876 aa8.44□□□□□ -1.06
YBL005W-AYBL005W-A SAM3Q08986 587 aa8.44□□□□□ -1.06
YBL005W-AYBL005W-A VPS29P38759 282 aa8.41□□□□□ -1.06
YBL005W-AYBL005W-A STS1P38637 319 aa8.37□□□□□ -1.07
YBL005W-AYBL005W-A RTG3P38165 486 aa8.34□□□□□ -1.07
YBL005W-AYBL005W-A XDJ1P39102 459 aa8.34□□□□□ -1.07
YBL005W-AYBL005W-A VRP1P37370 817 aa8.33□□□□□ -1.08
YBL005W-AYBL005W-A ABP1P15891 592 aaKnown RBP8.31□□□□□ -1.08
YBL005W-AYBL005W-A GYP5Q12344 894 aa8.31□□□□□ -1.08
YBL005W-AYBL005W-A HTA1P04911 132 aaKnown RBP8.29□□□□□ -1.08
YBL005W-AYBL005W-A HTA2P04912 132 aa8.29□□□□□ -1.08
YBL005W-AYBL005W-A PTC4P38089 393 aa8.29□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms