RNA–Protein interactions for RNA: YAL047C

SPC72, Transcript of Component of the cytoplasmic Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC72, Length 1,869 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC72YAL047C MTC1P47018 478 aaKnown RBP9.96□□□□□ -0.81
SPC72YAL047C FAP1P53971 965 aa9.54□□□□□ -0.88
SPC72YAL047C DRS1P32892 752 aaKnown RBP9.34□□□□□ -0.91
SPC72YAL047C PRY3P47033 881 aa8.97□□□□□ -0.97
SPC72YAL047C AAD16Q02895 342 aa8.68□□□□□ -1.02
SPC72YAL047C PRI1P10363 409 aa8.67□□□□□ -1.02
SPC72YAL047C YCK3P39962 524 aa8.4□□□□□ -1.07
SPC72YAL047C ISW2Q08773 1120 aa8.39□□□□□ -1.07
SPC72YAL047C HAA1Q12753 694 aaKnown RBP8.38□□□□□ -1.07
SPC72YAL047C RPG1P38249 964 aaKnown RBP8.3□□□□□ -1.08
SPC72YAL047C TSR3Q12094 313 aaKnown RBP8.17□□□□□ -1.1
SPC72YAL047C DIP2Q12220 943 aaPredicted RBP8.05□□□□□ -1.12
SPC72YAL047C BFR2Q06631 534 aaKnown RBP7.93□□□□□ -1.14
SPC72YAL047C MRPL32P25348 183 aa7.87□□□□□ -1.15
SPC72YAL047C AVT3P36062 692 aa7.8□□□□□ -1.16
SPC72YAL047C RSE1Q04693 1361 aaKnown RBP7.79□□□□□ -1.16
SPC72YAL047C YGL015CP33199 130 aa7.68□□□□□ -1.18
SPC72YAL047C REB1P21538 810 aa7.6□□□□□ -1.19
SPC72YAL047C RPL17AP05740 184 aaKnown RBP7.57□□□□□ -1.2
SPC72YAL047C RPL17BP46990 184 aaKnown RBP7.57□□□□□ -1.2
SPC72YAL047C CDC27P38042 758 aa7.36□□□□□ -1.23
SPC72YAL047C BUD31P25337 157 aaPredicted RBP7.24□□□□□ -1.25
SPC72YAL047C YKR023WP36119 530 aaKnown RBP7.23□□□□□ -1.25
SPC72YAL047C UBP10P53874 792 aaPredicted RBP7.23□□□□□ -1.25
SPC72YAL047C MAP2P38174 421 aaKnown RBP7.19□□□□□ -1.26
SPC72YAL047C SPT21P35209 758 aa7.18□□□□□ -1.26
SPC72YAL047C TFA1P36100 482 aa7.14□□□□□ -1.27
SPC72YAL047C HOP09932 586 aa7.09□□□□□ -1.27
SPC72YAL047C TFC8Q12308 588 aa7.09□□□□□ -1.28
SPC72YAL047C DCD1P06773 312 aa7.07□□□□□ -1.28
SPC72YAL047C TIF4632P39936 914 aaKnown RBP6.97□□□□□ -1.29
SPC72YAL047C SCY1P53009 804 aa6.97□□□□□ -1.29
SPC72YAL047C TGL3P40308 642 aa6.93□□□□□ -1.3
SPC72YAL047C SLX5P32828 619 aaKnown RBP6.92□□□□□ -1.3
SPC72YAL047C RIM101P33400 625 aa6.91□□□□□ -1.3
SPC72YAL047C UBP9P39967 754 aa6.88□□□□□ -1.31
SPC72YAL047C SIS1P25294 352 aaKnown RBP6.86□□□□□ -1.31
SPC72YAL047C BCH2P36122 765 aa6.84□□□□□ -1.31
SPC72YAL047C YIL055CP40523 627 aaKnown RBP6.68□□□□□ -1.34
SPC72YAL047C OXP1P28273 1286 aa6.68□□□□□ -1.34
SPC72YAL047C PTP3P40048 928 aa6.67□□□□□ -1.34
SPC72YAL047C EPS1P40557 701 aa6.63□□□□□ -1.35
SPC72YAL047C BDF1P35817 686 aa6.62□□□□□ -1.35
SPC72YAL047C YAH1Q12184 172 aaKnown RBP6.61□□□□□ -1.35
SPC72YAL047C MST1P07236 462 aa6.56□□□□□ -1.36
SPC72YAL047C YBL029C-AQ3E756 94 aa6.55□□□□□ -1.36
SPC72YAL047C YOR238WQ08634 303 aa6.53□□□□□ -1.36
SPC72YAL047C RSM7P47150 247 aa6.53□□□□□ -1.36
SPC72YAL047C BBC1P47068 1157 aa6.48□□□□□ -1.37
SPC72YAL047C SSP1P38871 571 aa6.47□□□□□ -1.37
SPC72YAL047C NSR1P27476 414 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
SPC72YAL047C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
SPC72YAL047C VNX1P42839 908 aa6.45□□□□□ -1.38
SPC72YAL047C AI2P03876 854 aa6.45□□□□□ -1.38
SPC72YAL047C YLR271WQ06152 274 aa6.45□□□□□ -1.38
SPC72YAL047C YAP5P40574 245 aa6.43□□□□□ -1.38
SPC72YAL047C SPP1Q03012 353 aa6.41□□□□□ -1.38
SPC72YAL047C WSC3Q12215 556 aa6.37□□□□□ -1.39
SPC72YAL047C PSD2P53037 1138 aaKnown RBP6.32□□□□□ -1.4
SPC72YAL047C GTT3P39996 337 aa6.31□□□□□ -1.4
SPC72YAL047C TIF11P38912 153 aaKnown RBP6.3□□□□□ -1.4
SPC72YAL047C YJL171CP46992 396 aa6.3□□□□□ -1.4
SPC72YAL047C MGA2P40578 1113 aa6.29□□□□□ -1.4
SPC72YAL047C AIR2Q12476 344 aaKnown RBP6.29□□□□□ -1.4
SPC72YAL047C FKH1P40466 484 aa6.26□□□□□ -1.41
SPC72YAL047C MRM1P25270 412 aa6.24□□□□□ -1.41
SPC72YAL047C CST9Q06032 482 aa6.24□□□□□ -1.41
SPC72YAL047C LDB19Q12502 818 aa6.22□□□□□ -1.41
SPC72YAL047C ULI1P43604 169 aa6.2□□□□□ -1.42
SPC72YAL047C PIB1Q06651 286 aa6.19□□□□□ -1.42
SPC72YAL047C IOC2Q12072 812 aa6.18□□□□□ -1.42
SPC72YAL047C BMT6Q12291 365 aa6.17□□□□□ -1.42
SPC72YAL047C RTG3P38165 486 aa6.13□□□□□ -1.43
SPC72YAL047C MSB4Q12317 492 aa6.13□□□□□ -1.43
SPC72YAL047C EAP1P36041 632 aaKnown RBP6.12□□□□□ -1.43
SPC72YAL047C YMR1P47147 688 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
SPC72YAL047C SET4P42948 560 aa6.07□□□□□ -1.44
SPC72YAL047C RTG1P32607 177 aa6.06□□□□□ -1.44
SPC72YAL047C YOL036WQ08206 761 aa6.06□□□□□ -1.44
SPC72YAL047C RCR1P38212 213 aa6.05□□□□□ -1.44
SPC72YAL047C TRP5P00931 707 aaKnown RBP6.05□□□□□ -1.44
SPC72YAL047C NCR1Q12200 1170 aa6.05□□□□□ -1.44
SPC72YAL047C VPS29P38759 282 aa6.04□□□□□ -1.44
SPC72YAL047C DBP1P24784 617 aaKnown RBP6.02□□□□□ -1.44
SPC72YAL047C YFR006WP43590 535 aa6.02□□□□□ -1.45
SPC72YAL047C YNL035CP53962 389 aaKnown RBP6□□□□□ -1.45
SPC72YAL047C SEC61P32915 480 aa6□□□□□ -1.45
SPC72YAL047C STS1P38637 319 aa5.98□□□□□ -1.45
SPC72YAL047C VMA1P17255 1071 aaKnown RBP5.98□□□□□ -1.45
SPC72YAL047C TFG1P41895 735 aaPredicted RBP5.96□□□□□ -1.46
SPC72YAL047C RAM2P29703 316 aa5.95□□□□□ -1.46
SPC72YAL047C SAM3Q08986 587 aa5.95□□□□□ -1.46
SPC72YAL047C MAK11P20484 414 aaKnown RBP5.93□□□□□ -1.46
SPC72YAL047C MIF2P35201 549 aa5.9□□□□□ -1.47
SPC72YAL047C SAP30P38429 201 aa5.9□□□□□ -1.47
SPC72YAL047C JIP4Q03361 876 aa5.9□□□□□ -1.47
SPC72YAL047C DAN4P47179 1161 aa5.89□□□□□ -1.47
SPC72YAL047C ABP1P15891 592 aaKnown RBP5.88□□□□□ -1.47
SPC72YAL047C GYP5Q12344 894 aa5.87□□□□□ -1.47
SPC72YAL047C BCK2P33306 851 aa5.85□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms