RNA–Protein interactions for RNA: ENST00000641924.1

PPT1-218, Transcript of palmitoyl-protein thioesterase 1, humanhuman

Gene PPT1, Length 550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPT1-218ENST00000641924 NISCHQ9Y2I1 1504 aa35.91■■■■□ 3.34
PPT1-218ENST00000641924 CCDC180Q9P1Z9 1646 aa32.15■■■□□ 2.74
PPT1-218ENST00000641924 ABCC9O60706 1549 aa31.49■■■□□ 2.63
PPT1-218ENST00000641924 RB1CC1Q8TDY2 1594 aa30.35■■■□□ 2.45
PPT1-218ENST00000641924 NACADO15069 1562 aa30.24■■■□□ 2.43
PPT1-218ENST00000641924 DCAF8L2P0C7V8 631 aa30.15■■■□□ 2.42
PPT1-218ENST00000641924 MYO15BQ96JP2 1530 aa29.99■■■□□ 2.39
PPT1-218ENST00000641924 ZCCHC6Q5VYS8 1495 aaKnown RBP29.87■■■□□ 2.37
PPT1-218ENST00000641924 DCAF1Q9Y4B6 1507 aa29.76■■■□□ 2.36
PPT1-218ENST00000641924 UNC13AQ9UPW8 1703 aa29.54■■■□□ 2.32
PPT1-218ENST00000641924 PABPN1Q86U42 306 aaKnown RBP eCLIP29.34■■■□□ 2.29
PPT1-218ENST00000641924 BICRAQ9NZM4 1560 aa29.23■■■□□ 2.27
PPT1-218ENST00000641924 SCRIBQ14160 1630 aa29.21■■■□□ 2.27
PPT1-218ENST00000641924 SHROOM4Q9ULL8 1493 aa29.16■■■□□ 2.26
PPT1-218ENST00000641924 DNAJC5BQ9UF47 199 aa28.87■■■□□ 2.21
PPT1-218ENST00000641924 EIF4G1Q04637 1599 aaKnown RBP28.58■■■□□ 2.17
PPT1-218ENST00000641924 CC2D2AQ9P2K1 1620 aa28.51■■■□□ 2.15
PPT1-218ENST00000641924 CECR2Q9BXF3 1484 aa28.36■■■□□ 2.13
PPT1-218ENST00000641924 BAZ1AQ9NRL2 1556 aaPredicted RBP27.94■■■□□ 2.06
PPT1-218ENST00000641924 SMARCA4P51532 1647 aa27.93■■■□□ 2.06
PPT1-218ENST00000641924 SMARCA2P51531 1590 aa27.88■■■□□ 2.05
PPT1-218ENST00000641924 NCAPD3P42695 1498 aa27.83■■■□□ 2.04
PPT1-218ENST00000641924 ATAD2BQ9ULI0 1458 aa27.79■■■□□ 2.04
PPT1-218ENST00000641924 HMGXB3Q12766 1538 aa27.73■■■□□ 2.03
PPT1-218ENST00000641924 PEG3Q9GZU2 1588 aa27.66■■■□□ 2.02
PPT1-218ENST00000641924 BAZ1BQ9UIG0 1483 aaKnown RBP27.64■■■□□ 2.02
PPT1-218ENST00000641924 MROH2BQ7Z745 1585 aa27.6■■■□□ 2.01
PPT1-218ENST00000641924 WIZO95785 1651 aa27.33■■□□□ 1.97
PPT1-218ENST00000641924 ERCC6Q03468 1493 aa27.31■■□□□ 1.96
PPT1-218ENST00000641924 RSF1Q96T23 1441 aaPredicted RBP27.27■■□□□ 1.96
PPT1-218ENST00000641924 LAMC3Q9Y6N6 1575 aa27.22■■□□□ 1.95
PPT1-218ENST00000641924 NESP48681 1621 aa27.12■■□□□ 1.93
PPT1-218ENST00000641924 TOP2AP11388 1531 aaKnown RBP27.1■■□□□ 1.93
PPT1-218ENST00000641924 PDS5BQ9NTI5 1447 aa27.07■■□□□ 1.92
PPT1-218ENST00000641924 CUX2O14529 1486 aa27.06■■□□□ 1.92
PPT1-218ENST00000641924 CADPSQ9ULU8 1353 aa27.02■■□□□ 1.92
PPT1-218ENST00000641924 KIF21AQ7Z4S6 1674 aa26.9■■□□□ 1.9
PPT1-218ENST00000641924 THOC2Q8NI27 1593 aaKnown RBP26.83■■□□□ 1.89
PPT1-218ENST00000641924 CFTRP13569 1480 aa26.81■■□□□ 1.88
PPT1-218ENST00000641924 CEP164Q9UPV0 1460 aa26.76■■□□□ 1.87
PPT1-218ENST00000641924 MRC2Q9UBG0 1479 aa26.74■■□□□ 1.87
PPT1-218ENST00000641924 PRDM2Q13029 1718 aa26.72■■□□□ 1.87
PPT1-218ENST00000641924 FANCD2Q9BXW9 1451 aa26.72■■□□□ 1.87
PPT1-218ENST00000641924 CCDC88BA6NC98 1476 aa26.71■■□□□ 1.87
PPT1-218ENST00000641924 SUPT5HO00267 1087 aaKnown RBP26.7■■□□□ 1.86
PPT1-218ENST00000641924 WDR62O43379 1518 aa26.62■■□□□ 1.85
PPT1-218ENST00000641924 ABCC8Q09428 1581 aa26.4■■□□□ 1.82
PPT1-218ENST00000641924 URB2Q14146 1524 aaKnown RBP26.39■■□□□ 1.81
PPT1-218ENST00000641924 DNAJC5Q9H3Z4 198 aa26.35■■□□□ 1.81
PPT1-218ENST00000641924 DNMBPQ6XZF7 1577 aa26.26■■□□□ 1.79
PPT1-218ENST00000641924 TOPBP1Q92547 1522 aa26.24■■□□□ 1.79
PPT1-218ENST00000641924 IFT140Q96RY7 1462 aa26.2■■□□□ 1.78
PPT1-218ENST00000641924 POLA1P09884 1462 aaPredicted RBP26■■□□□ 1.75
PPT1-218ENST00000641924 TARBP1Q13395 1621 aaKnown RBP25.96■■□□□ 1.75
PPT1-218ENST00000641924 EIF4G3O43432 1585 aaKnown RBP25.95■■□□□ 1.75
PPT1-218ENST00000641924 ZNF608Q9ULD9 1512 aaPredicted RBP25.95■■□□□ 1.74
PPT1-218ENST00000641924 CUX1P39880 1505 aa25.93■■□□□ 1.74
PPT1-218ENST00000641924 SOGA1O94964 1423 aa25.93■■□□□ 1.74
PPT1-218ENST00000641924 FGD5Q6ZNL6 1462 aa25.92■■□□□ 1.74
PPT1-218ENST00000641924 WDR97A6NE52 1622 aa25.92■■□□□ 1.74
PPT1-218ENST00000641924 OSCARQ8IYS5 282 aa25.9■■□□□ 1.74
PPT1-218ENST00000641924 RAD54L2Q9Y4B4 1467 aa25.83■■□□□ 1.73
PPT1-218ENST00000641924 AQRO60306 1485 aaKnown RBP eCLIP25.81■■□□□ 1.72
PPT1-218ENST00000641924 WRNQ14191 1432 aaPredicted RBP eCLIP25.79■■□□□ 1.72
PPT1-218ENST00000641924 TDRD9Q8NDG6 1382 aaKnown RBP25.75■■□□□ 1.71
PPT1-218ENST00000641924 TOP2BQ02880 1626 aa25.74■■□□□ 1.71
PPT1-218ENST00000641924 BIVM-ERCC5R4GMW8 1640 aa25.74■■□□□ 1.71
PPT1-218ENST00000641924 GRIN2BQ13224 1484 aa25.69■■□□□ 1.7
PPT1-218ENST00000641924 ABCA10Q8WWZ4 1543 aa25.68■■□□□ 1.7
PPT1-218ENST00000641924 CHD1O14646 1710 aa25.67■■□□□ 1.7
PPT1-218ENST00000641924 FBLN2P98095 1184 aa25.67■■□□□ 1.7
PPT1-218ENST00000641924 MAGI1Q96QZ7 1491 aaPredicted RBP25.66■■□□□ 1.7
PPT1-218ENST00000641924 GAPVD1Q14C86 1478 aa25.65■■□□□ 1.7
PPT1-218ENST00000641924 SYNJ1O43426 1573 aa25.65■■□□□ 1.7
PPT1-218ENST00000641924 PBRM1Q86U86 1689 aa25.63■■□□□ 1.69
PPT1-218ENST00000641924 SNAPC4Q5SXM2 1469 aa25.62■■□□□ 1.69
PPT1-218ENST00000641924 ABCA5Q8WWZ7 1642 aa25.59■■□□□ 1.69
PPT1-218ENST00000641924 CHMP7Q8WUX9 453 aaPredicted RBP25.58■■□□□ 1.69
PPT1-218ENST00000641924 SYNJ2O15056 1496 aa25.54■■□□□ 1.68
PPT1-218ENST00000641924 TRIM41Q8WV44 630 aa25.45■■□□□ 1.66
PPT1-218ENST00000641924 RIMBP3CA6NJZ7 1639 aa25.43■■□□□ 1.66
PPT1-218ENST00000641924 RIMBP3BA6NNM3 1639 aa25.43■■□□□ 1.66
PPT1-218ENST00000641924 RIMBP3Q9UFD9 1639 aa25.43■■□□□ 1.66
PPT1-218ENST00000641924 ERICH3Q5RHP9 1530 aa25.42■■□□□ 1.66
PPT1-218ENST00000641924 ARHGEF11O15085 1522 aa25.41■■□□□ 1.66
PPT1-218ENST00000641924 ADAMTS12P58397 1594 aa25.37■■□□□ 1.65
PPT1-218ENST00000641924 FHAD1B1AJZ9 1412 aa25.36■■□□□ 1.65
PPT1-218ENST00000641924 CLASP1Q7Z460 1538 aa25.33■■□□□ 1.65
PPT1-218ENST00000641924 GRIN2AQ12879 1464 aa25.33■■□□□ 1.65
PPT1-218ENST00000641924 KIF27Q86VH2 1401 aa25.31■■□□□ 1.64
PPT1-218ENST00000641924 CUL7Q14999 1698 aa25.22■■□□□ 1.63
PPT1-218ENST00000641924 CYB5RLQ6IPT4 315 aa25.19■■□□□ 1.62
PPT1-218ENST00000641924 CHIC1Q5VXU3 224 aa25.18■■□□□ 1.62
PPT1-218ENST00000641924 NUP160Q12769 1436 aa25.18■■□□□ 1.62
PPT1-218ENST00000641924 CEP170Q5SW79 1584 aa25.14■■□□□ 1.62
PPT1-218ENST00000641924 ARAP1Q96P48 1450 aa25.14■■□□□ 1.61
PPT1-218ENST00000641924 IGF1RP08069 1367 aa25.09■■□□□ 1.61
PPT1-218ENST00000641924 SHROOM2Q13796 1616 aa25.03■■□□□ 1.6
PPT1-218ENST00000641924 CARMIL1Q5VZK9 1371 aa25.02■■□□□ 1.6
PPT1-218ENST00000641924 RUSC2Q8N2Y8 1516 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms