RNA–Protein interactions for RNA: ENST00000641457.1

SAMMSON-216, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

Gene SAMMSON, Length 1,110 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-216ENST00000641457 NISCHQ9Y2I1 1504 aa27.87■■■□□ 2.05
SAMMSON-216ENST00000641457 ABCC9O60706 1549 aa25.41■■□□□ 1.66
SAMMSON-216ENST00000641457 CCDC180Q9P1Z9 1646 aa25.23■■□□□ 1.63
SAMMSON-216ENST00000641457 DNAJC5BQ9UF47 199 aa24.14■■□□□ 1.45
SAMMSON-216ENST00000641457 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.45
SAMMSON-216ENST00000641457 NACADO15069 1562 aa23.84■■□□□ 1.41
SAMMSON-216ENST00000641457 UNC13AQ9UPW8 1703 aa23.78■■□□□ 1.4
SAMMSON-216ENST00000641457 DCAF8L2P0C7V8 631 aa23.58■■□□□ 1.37
SAMMSON-216ENST00000641457 PABPN1Q86U42 306 aaKnown RBP eCLIP23.58■■□□□ 1.37
SAMMSON-216ENST00000641457 BICRAQ9NZM4 1560 aa23.46■■□□□ 1.35
SAMMSON-216ENST00000641457 MYO15BQ96JP2 1530 aa23.4■■□□□ 1.34
SAMMSON-216ENST00000641457 ZCCHC6Q5VYS8 1495 aaKnown RBP23.03■■□□□ 1.28
SAMMSON-216ENST00000641457 CC2D2AQ9P2K1 1620 aa23.01■■□□□ 1.27
SAMMSON-216ENST00000641457 DCAF1Q9Y4B6 1507 aa23.01■■□□□ 1.27
SAMMSON-216ENST00000641457 SHROOM4Q9ULL8 1493 aa22.99■■□□□ 1.27
SAMMSON-216ENST00000641457 SCRIBQ14160 1630 aa22.91■■□□□ 1.26
SAMMSON-216ENST00000641457 CECR2Q9BXF3 1484 aa22.91■■□□□ 1.26
SAMMSON-216ENST00000641457 EIF4G1Q04637 1599 aaKnown RBP22.85■■□□□ 1.25
SAMMSON-216ENST00000641457 AEBP2Q6ZN18 517 aaPredicted RBP22.44■■□□□ 1.18
SAMMSON-216ENST00000641457 DNAJC5Q9H3Z4 198 aa22.34■■□□□ 1.17
SAMMSON-216ENST00000641457 CUX2O14529 1486 aa22■■□□□ 1.11
SAMMSON-216ENST00000641457 NCAPD3P42695 1498 aa21.99■■□□□ 1.11
SAMMSON-216ENST00000641457 ERCC6Q03468 1493 aa21.91■■□□□ 1.1
SAMMSON-216ENST00000641457 ATAD2BQ9ULI0 1458 aa21.89■■□□□ 1.09
SAMMSON-216ENST00000641457 SMARCA4P51532 1647 aa21.85■■□□□ 1.09
SAMMSON-216ENST00000641457 HMGXB3Q12766 1538 aa21.82■■□□□ 1.08
SAMMSON-216ENST00000641457 SMARCA2P51531 1590 aa21.82■■□□□ 1.08
SAMMSON-216ENST00000641457 NESP48681 1621 aa21.78■■□□□ 1.08
SAMMSON-216ENST00000641457 THOC2Q8NI27 1593 aaKnown RBP21.65■■□□□ 1.06
SAMMSON-216ENST00000641457 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
SAMMSON-216ENST00000641457 BAZ1BQ9UIG0 1483 aaKnown RBP21.64■■□□□ 1.06
SAMMSON-216ENST00000641457 PEG3Q9GZU2 1588 aa21.63■■□□□ 1.05
SAMMSON-216ENST00000641457 KIF21AQ7Z4S6 1674 aa21.6■■□□□ 1.05
SAMMSON-216ENST00000641457 LAMC3Q9Y6N6 1575 aa21.58■■□□□ 1.05
SAMMSON-216ENST00000641457 MROH2BQ7Z745 1585 aa21.49■■□□□ 1.03
SAMMSON-216ENST00000641457 PDS5BQ9NTI5 1447 aa21.38■■□□□ 1.01
SAMMSON-216ENST00000641457 WIZO95785 1651 aa21.29■■□□□ 1
SAMMSON-216ENST00000641457 CADPSQ9ULU8 1353 aa21.28■■□□□ 1
SAMMSON-216ENST00000641457 MRC2Q9UBG0 1479 aa21.25■□□□□ 0.99
SAMMSON-216ENST00000641457 WDR62O43379 1518 aa21.24■□□□□ 0.99
SAMMSON-216ENST00000641457 TRIM41Q8WV44 630 aa21.19■□□□□ 0.98
SAMMSON-216ENST00000641457 CHIC1Q5VXU3 224 aa21.13■□□□□ 0.97
SAMMSON-216ENST00000641457 CEP164Q9UPV0 1460 aa21.1■□□□□ 0.97
SAMMSON-216ENST00000641457 FANCD2Q9BXW9 1451 aa21.06■□□□□ 0.96
SAMMSON-216ENST00000641457 CFTRP13569 1480 aa21.01■□□□□ 0.95
SAMMSON-216ENST00000641457 PRDM2Q13029 1718 aa20.98■□□□□ 0.95
SAMMSON-216ENST00000641457 URB2Q14146 1524 aaKnown RBP20.94■□□□□ 0.94
SAMMSON-216ENST00000641457 OSCARQ8IYS5 282 aa20.93■□□□□ 0.94
SAMMSON-216ENST00000641457 TOP2AP11388 1531 aaKnown RBP20.91■□□□□ 0.94
SAMMSON-216ENST00000641457 RSF1Q96T23 1441 aaPredicted RBP20.9■□□□□ 0.94
SAMMSON-216ENST00000641457 RIMBP3CA6NJZ7 1639 aa20.8■□□□□ 0.92
SAMMSON-216ENST00000641457 RIMBP3BA6NNM3 1639 aa20.8■□□□□ 0.92
SAMMSON-216ENST00000641457 RIMBP3Q9UFD9 1639 aa20.8■□□□□ 0.92
SAMMSON-216ENST00000641457 ZNF608Q9ULD9 1512 aaPredicted RBP20.73■□□□□ 0.91
SAMMSON-216ENST00000641457 CCDC88BA6NC98 1476 aa20.68■□□□□ 0.9
SAMMSON-216ENST00000641457 IFT140Q96RY7 1462 aa20.68■□□□□ 0.9
SAMMSON-216ENST00000641457 TOPBP1Q92547 1522 aa20.66■□□□□ 0.9
SAMMSON-216ENST00000641457 ARHGEF11O15085 1522 aa20.64■□□□□ 0.9
SAMMSON-216ENST00000641457 CHD1O14646 1710 aa20.63■□□□□ 0.89
SAMMSON-216ENST00000641457 EIF4G3O43432 1585 aaKnown RBP20.63■□□□□ 0.89
SAMMSON-216ENST00000641457 ABCC8Q09428 1581 aa20.56■□□□□ 0.88
SAMMSON-216ENST00000641457 DNMBPQ6XZF7 1577 aa20.56■□□□□ 0.88
SAMMSON-216ENST00000641457 TARBP1Q13395 1621 aaKnown RBP20.56■□□□□ 0.88
SAMMSON-216ENST00000641457 AQRO60306 1485 aaKnown RBP eCLIP20.49■□□□□ 0.87
SAMMSON-216ENST00000641457 CYB5RLQ6IPT4 315 aa20.46■□□□□ 0.87
SAMMSON-216ENST00000641457 ARAP1Q96P48 1450 aa20.42■□□□□ 0.86
SAMMSON-216ENST00000641457 POLA1P09884 1462 aaPredicted RBP20.41■□□□□ 0.86
SAMMSON-216ENST00000641457 RAD54L2Q9Y4B4 1467 aa20.36■□□□□ 0.85
SAMMSON-216ENST00000641457 FBLN2P98095 1184 aa20.35■□□□□ 0.85
SAMMSON-216ENST00000641457 TRHP20396 242 aaPredicted RBP20.3■□□□□ 0.84
SAMMSON-216ENST00000641457 TDRD9Q8NDG6 1382 aaKnown RBP20.29■□□□□ 0.84
SAMMSON-216ENST00000641457 SOGA1O94964 1423 aa20.28■□□□□ 0.84
SAMMSON-216ENST00000641457 CLASP1Q7Z460 1538 aa20.27■□□□□ 0.84
SAMMSON-216ENST00000641457 WDR97A6NE52 1622 aa20.27■□□□□ 0.84
SAMMSON-216ENST00000641457 SNAPC4Q5SXM2 1469 aa20.24■□□□□ 0.83
SAMMSON-216ENST00000641457 FGD5Q6ZNL6 1462 aa20.24■□□□□ 0.83
SAMMSON-216ENST00000641457 CUX1P39880 1505 aa20.21■□□□□ 0.83
SAMMSON-216ENST00000641457 SYNJ1O43426 1573 aa20.21■□□□□ 0.83
SAMMSON-216ENST00000641457 PBRM1Q86U86 1689 aa20.2■□□□□ 0.82
SAMMSON-216ENST00000641457 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
SAMMSON-216ENST00000641457 CHMP7Q8WUX9 453 aaPredicted RBP20.15■□□□□ 0.82
SAMMSON-216ENST00000641457 GRIN2BQ13224 1484 aa20.14■□□□□ 0.81
SAMMSON-216ENST00000641457 SYNJ2O15056 1496 aa20.12■□□□□ 0.81
SAMMSON-216ENST00000641457 GAPVD1Q14C86 1478 aa20.05■□□□□ 0.8
SAMMSON-216ENST00000641457 ABCA5Q8WWZ7 1642 aa20.05■□□□□ 0.8
SAMMSON-216ENST00000641457 ABCA10Q8WWZ4 1543 aa19.99■□□□□ 0.79
SAMMSON-216ENST00000641457 ERCC6L2Q5T890 1561 aa19.96■□□□□ 0.79
SAMMSON-216ENST00000641457 GRIN2AQ12879 1464 aa19.91■□□□□ 0.78
SAMMSON-216ENST00000641457 CEP170Q5SW79 1584 aa19.9■□□□□ 0.78
SAMMSON-216ENST00000641457 ADAMTS12P58397 1594 aa19.89■□□□□ 0.77
SAMMSON-216ENST00000641457 KIF13AQ9H1H9 1805 aa19.89■□□□□ 0.77
SAMMSON-216ENST00000641457 SHROOM2Q13796 1616 aa19.88■□□□□ 0.77
SAMMSON-216ENST00000641457 BIVM-ERCC5R4GMW8 1640 aa19.86■□□□□ 0.77
SAMMSON-216ENST00000641457 NUP160Q12769 1436 aa19.85■□□□□ 0.77
SAMMSON-216ENST00000641457 TOP2BQ02880 1626 aa19.82■□□□□ 0.76
SAMMSON-216ENST00000641457 WRNQ14191 1432 aaPredicted RBP eCLIP19.82■□□□□ 0.76
SAMMSON-216ENST00000641457 FHAD1B1AJZ9 1412 aa19.76■□□□□ 0.75
SAMMSON-216ENST00000641457 ERICH3Q5RHP9 1530 aa19.75■□□□□ 0.75
SAMMSON-216ENST00000641457 SUPT5HO00267 1087 aaKnown RBP19.71■□□□□ 0.75
SAMMSON-216ENST00000641457 PRG4Q92954 1404 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms