RNA–Protein interactions for RNA: ENST00000641399.1

ESR1-215, Transcript of estrogen receptor 1, humanhuman

Gene ESR1, Length 1,207 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESR1-215ENST00000641399 NISCHQ9Y2I1 1504 aa26.65■■□□□ 1.86
ESR1-215ENST00000641399 CCDC180Q9P1Z9 1646 aa23.73■■□□□ 1.39
ESR1-215ENST00000641399 ABCC9O60706 1549 aa23.12■■□□□ 1.29
ESR1-215ENST00000641399 NACADO15069 1562 aa22.29■■□□□ 1.16
ESR1-215ENST00000641399 RB1CC1Q8TDY2 1594 aa22.29■■□□□ 1.16
ESR1-215ENST00000641399 MYO15BQ96JP2 1530 aa22.26■■□□□ 1.15
ESR1-215ENST00000641399 ZCCHC6Q5VYS8 1495 aaKnown RBP22.22■■□□□ 1.15
ESR1-215ENST00000641399 DCAF1Q9Y4B6 1507 aa22.13■■□□□ 1.13
ESR1-215ENST00000641399 DCAF8L2P0C7V8 631 aa22.03■■□□□ 1.12
ESR1-215ENST00000641399 UNC13AQ9UPW8 1703 aa21.81■■□□□ 1.08
ESR1-215ENST00000641399 BICRAQ9NZM4 1560 aa21.69■■□□□ 1.06
ESR1-215ENST00000641399 PABPN1Q86U42 306 aaKnown RBP eCLIP21.56■■□□□ 1.04
ESR1-215ENST00000641399 SCRIBQ14160 1630 aa21.54■■□□□ 1.04
ESR1-215ENST00000641399 SHROOM4Q9ULL8 1493 aa21.49■■□□□ 1.03
ESR1-215ENST00000641399 DNAJC5BQ9UF47 199 aa21.3■■□□□ 1
ESR1-215ENST00000641399 EIF4G1Q04637 1599 aaKnown RBP21.06■□□□□ 0.96
ESR1-215ENST00000641399 CC2D2AQ9P2K1 1620 aa20.96■□□□□ 0.95
ESR1-215ENST00000641399 AEBP2Q6ZN18 517 aaPredicted RBP20.85■□□□□ 0.93
ESR1-215ENST00000641399 CECR2Q9BXF3 1484 aa20.81■□□□□ 0.92
ESR1-215ENST00000641399 SMARCA4P51532 1647 aa20.67■□□□□ 0.9
ESR1-215ENST00000641399 BAZ1AQ9NRL2 1556 aaPredicted RBP20.64■□□□□ 0.9
ESR1-215ENST00000641399 NCAPD3P42695 1498 aa20.6■□□□□ 0.89
ESR1-215ENST00000641399 ATAD2BQ9ULI0 1458 aa20.57■□□□□ 0.88
ESR1-215ENST00000641399 CHIC1Q5VXU3 224 aa20.57■□□□□ 0.88
ESR1-215ENST00000641399 PEG3Q9GZU2 1588 aa20.55■□□□□ 0.88
ESR1-215ENST00000641399 SMARCA2P51531 1590 aa20.54■□□□□ 0.88
ESR1-215ENST00000641399 MROH2BQ7Z745 1585 aa20.52■□□□□ 0.88
ESR1-215ENST00000641399 HMGXB3Q12766 1538 aa20.49■□□□□ 0.87
ESR1-215ENST00000641399 BAZ1BQ9UIG0 1483 aaKnown RBP20.36■□□□□ 0.85
ESR1-215ENST00000641399 RSF1Q96T23 1441 aaPredicted RBP20.29■□□□□ 0.84
ESR1-215ENST00000641399 WIZO95785 1651 aa20.27■□□□□ 0.84
ESR1-215ENST00000641399 TOP2AP11388 1531 aaKnown RBP20.09■□□□□ 0.81
ESR1-215ENST00000641399 NESP48681 1621 aa20.03■□□□□ 0.8
ESR1-215ENST00000641399 LAMC3Q9Y6N6 1575 aa20.03■□□□□ 0.8
ESR1-215ENST00000641399 CADPSQ9ULU8 1353 aa19.95■□□□□ 0.79
ESR1-215ENST00000641399 ERCC6Q03468 1493 aa19.89■□□□□ 0.77
ESR1-215ENST00000641399 CFTRP13569 1480 aa19.86■□□□□ 0.77
ESR1-215ENST00000641399 PDS5BQ9NTI5 1447 aa19.85■□□□□ 0.77
ESR1-215ENST00000641399 CCDC88BA6NC98 1476 aa19.84■□□□□ 0.77
ESR1-215ENST00000641399 KIF21AQ7Z4S6 1674 aa19.81■□□□□ 0.76
ESR1-215ENST00000641399 CUX2O14529 1486 aa19.79■□□□□ 0.76
ESR1-215ENST00000641399 THOC2Q8NI27 1593 aaKnown RBP19.79■□□□□ 0.76
ESR1-215ENST00000641399 FANCD2Q9BXW9 1451 aa19.7■□□□□ 0.74
ESR1-215ENST00000641399 PRDM2Q13029 1718 aa19.69■□□□□ 0.74
ESR1-215ENST00000641399 CEP164Q9UPV0 1460 aa19.67■□□□□ 0.74
ESR1-215ENST00000641399 MRC2Q9UBG0 1479 aa19.66■□□□□ 0.74
ESR1-215ENST00000641399 WDR62O43379 1518 aa19.64■□□□□ 0.73
ESR1-215ENST00000641399 SUPT5HO00267 1087 aaKnown RBP19.58■□□□□ 0.72
ESR1-215ENST00000641399 URB2Q14146 1524 aaKnown RBP19.53■□□□□ 0.72
ESR1-215ENST00000641399 ABCC8Q09428 1581 aa19.4■□□□□ 0.7
ESR1-215ENST00000641399 TOPBP1Q92547 1522 aa19.4■□□□□ 0.7
ESR1-215ENST00000641399 DNMBPQ6XZF7 1577 aa19.38■□□□□ 0.69
ESR1-215ENST00000641399 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
ESR1-215ENST00000641399 CUX1P39880 1505 aa19.25■□□□□ 0.67
ESR1-215ENST00000641399 POLA1P09884 1462 aaPredicted RBP19.24■□□□□ 0.67
ESR1-215ENST00000641399 TARBP1Q13395 1621 aaKnown RBP19.23■□□□□ 0.67
ESR1-215ENST00000641399 DNAJC5Q9H3Z4 198 aa19.19■□□□□ 0.66
ESR1-215ENST00000641399 ZNF608Q9ULD9 1512 aaPredicted RBP19.18■□□□□ 0.66
ESR1-215ENST00000641399 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
ESR1-215ENST00000641399 SOGA1O94964 1423 aa19.12■□□□□ 0.65
ESR1-215ENST00000641399 EIF4G3O43432 1585 aaKnown RBP19.11■□□□□ 0.65
ESR1-215ENST00000641399 RAD54L2Q9Y4B4 1467 aa19.11■□□□□ 0.65
ESR1-215ENST00000641399 BIVM-ERCC5R4GMW8 1640 aa19.11■□□□□ 0.65
ESR1-215ENST00000641399 WDR97A6NE52 1622 aa19.1■□□□□ 0.65
ESR1-215ENST00000641399 TOP2BQ02880 1626 aa19.1■□□□□ 0.65
ESR1-215ENST00000641399 WRNQ14191 1432 aaPredicted RBP eCLIP19.09■□□□□ 0.65
ESR1-215ENST00000641399 SYNJ1O43426 1573 aa19.06■□□□□ 0.64
ESR1-215ENST00000641399 AQRO60306 1485 aaKnown RBP eCLIP19.05■□□□□ 0.64
ESR1-215ENST00000641399 ABCA10Q8WWZ4 1543 aa19.03■□□□□ 0.64
ESR1-215ENST00000641399 TDRD9Q8NDG6 1382 aaKnown RBP19■□□□□ 0.63
ESR1-215ENST00000641399 ABCA5Q8WWZ7 1642 aa18.96■□□□□ 0.63
ESR1-215ENST00000641399 GRIN2BQ13224 1484 aa18.92■□□□□ 0.62
ESR1-215ENST00000641399 GAPVD1Q14C86 1478 aa18.91■□□□□ 0.62
ESR1-215ENST00000641399 OSCARQ8IYS5 282 aa18.9■□□□□ 0.62
ESR1-215ENST00000641399 MAGI1Q96QZ7 1491 aaPredicted RBP18.9■□□□□ 0.62
ESR1-215ENST00000641399 SNAPC4Q5SXM2 1469 aa18.88■□□□□ 0.61
ESR1-215ENST00000641399 PBRM1Q86U86 1689 aa18.87■□□□□ 0.61
ESR1-215ENST00000641399 CHD1O14646 1710 aa18.86■□□□□ 0.61
ESR1-215ENST00000641399 SYNJ2O15056 1496 aa18.81■□□□□ 0.6
ESR1-215ENST00000641399 ERICH3Q5RHP9 1530 aa18.79■□□□□ 0.6
ESR1-215ENST00000641399 ADAMTS12P58397 1594 aa18.76■□□□□ 0.59
ESR1-215ENST00000641399 CLASP1Q7Z460 1538 aa18.72■□□□□ 0.59
ESR1-215ENST00000641399 CHMP7Q8WUX9 453 aaPredicted RBP18.71■□□□□ 0.59
ESR1-215ENST00000641399 FHAD1B1AJZ9 1412 aa18.71■□□□□ 0.59
ESR1-215ENST00000641399 FBLN2P98095 1184 aa18.7■□□□□ 0.58
ESR1-215ENST00000641399 KIF27Q86VH2 1401 aa18.68■□□□□ 0.58
ESR1-215ENST00000641399 GRIN2AQ12879 1464 aa18.68■□□□□ 0.58
ESR1-215ENST00000641399 IGF1RP08069 1367 aa18.66■□□□□ 0.58
ESR1-215ENST00000641399 NUP160Q12769 1436 aa18.65■□□□□ 0.58
ESR1-215ENST00000641399 ARHGEF11O15085 1522 aa18.64■□□□□ 0.58
ESR1-215ENST00000641399 RIMBP3CA6NJZ7 1639 aa18.63■□□□□ 0.57
ESR1-215ENST00000641399 RIMBP3BA6NNM3 1639 aa18.63■□□□□ 0.57
ESR1-215ENST00000641399 RIMBP3Q9UFD9 1639 aa18.63■□□□□ 0.57
ESR1-215ENST00000641399 CUL7Q14999 1698 aa18.6■□□□□ 0.57
ESR1-215ENST00000641399 CEP170Q5SW79 1584 aa18.59■□□□□ 0.57
ESR1-215ENST00000641399 TRIM41Q8WV44 630 aa18.54■□□□□ 0.56
ESR1-215ENST00000641399 RUSC2Q8N2Y8 1516 aa18.52■□□□□ 0.56
ESR1-215ENST00000641399 SHROOM2Q13796 1616 aa18.52■□□□□ 0.55
ESR1-215ENST00000641399 ARAP1Q96P48 1450 aa18.51■□□□□ 0.55
ESR1-215ENST00000641399 CARMIL1Q5VZK9 1371 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms