RNA–Protein interactions for RNA: ENST00000641014.1

SAMMSON-204, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

Gene SAMMSON, Length 1,355 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-204ENST00000641014 AEBP2Q6ZN18 517 aaPredicted RBP28.68■■■□□ 2.18
SAMMSON-204ENST00000641014 NISCHQ9Y2I1 1504 aa27.61■■■□□ 2.01
SAMMSON-204ENST00000641014 CHIC1Q5VXU3 224 aa27.2■■□□□ 1.94
SAMMSON-204ENST00000641014 CCDC180Q9P1Z9 1646 aa24.66■■□□□ 1.54
SAMMSON-204ENST00000641014 SENP3Q9H4L4 574 aaPredicted RBP24.53■■□□□ 1.52
SAMMSON-204ENST00000641014 PHF23Q9BUL5 403 aaPredicted RBP24.16■■□□□ 1.46
SAMMSON-204ENST00000641014 ABCC9O60706 1549 aa24.1■■□□□ 1.45
SAMMSON-204ENST00000641014 RB1CC1Q8TDY2 1594 aa23.21■■□□□ 1.31
SAMMSON-204ENST00000641014 NACADO15069 1562 aa23.17■■□□□ 1.3
SAMMSON-204ENST00000641014 MYO15BQ96JP2 1530 aa23.05■■□□□ 1.28
SAMMSON-204ENST00000641014 ZCCHC6Q5VYS8 1495 aaKnown RBP22.99■■□□□ 1.27
SAMMSON-204ENST00000641014 DCAF8L2P0C7V8 631 aa22.95■■□□□ 1.26
SAMMSON-204ENST00000641014 DCAF1Q9Y4B6 1507 aa22.9■■□□□ 1.26
SAMMSON-204ENST00000641014 FOXD1Q16676 465 aa22.83■■□□□ 1.25
SAMMSON-204ENST00000641014 UNC13AQ9UPW8 1703 aa22.73■■□□□ 1.23
SAMMSON-204ENST00000641014 BICRAQ9NZM4 1560 aa22.53■■□□□ 1.2
SAMMSON-204ENST00000641014 PABPN1Q86U42 306 aaKnown RBP eCLIP22.46■■□□□ 1.19
SAMMSON-204ENST00000641014 SCRIBQ14160 1630 aa22.39■■□□□ 1.17
SAMMSON-204ENST00000641014 SHROOM4Q9ULL8 1493 aa22.31■■□□□ 1.16
SAMMSON-204ENST00000641014 DNAJC5BQ9UF47 199 aa22.22■■□□□ 1.15
SAMMSON-204ENST00000641014 EIF4G1Q04637 1599 aaKnown RBP21.93■■□□□ 1.1
SAMMSON-204ENST00000641014 CC2D2AQ9P2K1 1620 aa21.85■■□□□ 1.09
SAMMSON-204ENST00000641014 PLPPR3Q6T4P5 718 aa21.7■■□□□ 1.06
SAMMSON-204ENST00000641014 CECR2Q9BXF3 1484 aa21.69■■□□□ 1.06
SAMMSON-204ENST00000641014 SMARCA4P51532 1647 aa21.46■■□□□ 1.03
SAMMSON-204ENST00000641014 MSH5O43196 834 aa21.45■■□□□ 1.02
SAMMSON-204ENST00000641014 BAZ1AQ9NRL2 1556 aaPredicted RBP21.41■■□□□ 1.02
SAMMSON-204ENST00000641014 NCAPD3P42695 1498 aa21.38■■□□□ 1.01
SAMMSON-204ENST00000641014 ATAD2BQ9ULI0 1458 aa21.35■■□□□ 1.01
SAMMSON-204ENST00000641014 SMARCA2P51531 1590 aa21.33■■□□□ 1.01
SAMMSON-204ENST00000641014 PEG3Q9GZU2 1588 aa21.3■■□□□ 1
SAMMSON-204ENST00000641014 PIAS4Q8N2W9 510 aaPredicted RBP21.29■■□□□ 1
SAMMSON-204ENST00000641014 HMGXB3Q12766 1538 aa21.28■■□□□ 1
SAMMSON-204ENST00000641014 PPP6R1Q9UPN7 881 aa21.26■□□□□ 0.99
SAMMSON-204ENST00000641014 MROH2BQ7Z745 1585 aa21.26■□□□□ 0.99
SAMMSON-204ENST00000641014 ADRA2BP18089 450 aa21.17■□□□□ 0.98
SAMMSON-204ENST00000641014 BAZ1BQ9UIG0 1483 aaKnown RBP21.14■□□□□ 0.98
SAMMSON-204ENST00000641014 POTEDQ86YR6 584 aa21.03■□□□□ 0.96
SAMMSON-204ENST00000641014 WIZO95785 1651 aa21.03■□□□□ 0.96
SAMMSON-204ENST00000641014 RSF1Q96T23 1441 aaPredicted RBP20.97■□□□□ 0.95
SAMMSON-204ENST00000641014 LAMC3Q9Y6N6 1575 aa20.84■□□□□ 0.93
SAMMSON-204ENST00000641014 NESP48681 1621 aa20.84■□□□□ 0.93
SAMMSON-204ENST00000641014 TOP2AP11388 1531 aaKnown RBP20.82■□□□□ 0.92
SAMMSON-204ENST00000641014 ERCC6Q03468 1493 aa20.77■□□□□ 0.92
SAMMSON-204ENST00000641014 CADPSQ9ULU8 1353 aa20.71■□□□□ 0.91
SAMMSON-204ENST00000641014 CUX2O14529 1486 aa20.67■□□□□ 0.9
SAMMSON-204ENST00000641014 KIF21AQ7Z4S6 1674 aa20.65■□□□□ 0.9
SAMMSON-204ENST00000641014 PDS5BQ9NTI5 1447 aa20.65■□□□□ 0.9
SAMMSON-204ENST00000641014 THOC2Q8NI27 1593 aaKnown RBP20.61■□□□□ 0.89
SAMMSON-204ENST00000641014 CFTRP13569 1480 aa20.59■□□□□ 0.89
SAMMSON-204ENST00000641014 CCDC88BA6NC98 1476 aa20.54■□□□□ 0.88
SAMMSON-204ENST00000641014 PRDM2Q13029 1718 aa20.5■□□□□ 0.87
SAMMSON-204ENST00000641014 FANCD2Q9BXW9 1451 aa20.46■□□□□ 0.87
SAMMSON-204ENST00000641014 MRC2Q9UBG0 1479 aa20.46■□□□□ 0.87
SAMMSON-204ENST00000641014 CEP164Q9UPV0 1460 aa20.46■□□□□ 0.87
SAMMSON-204ENST00000641014 WDR62O43379 1518 aa20.43■□□□□ 0.86
SAMMSON-204ENST00000641014 URB2Q14146 1524 aaKnown RBP20.28■□□□□ 0.84
SAMMSON-204ENST00000641014 SUPT5HO00267 1087 aaKnown RBP20.24■□□□□ 0.83
SAMMSON-204ENST00000641014 ABCC8Q09428 1581 aa20.16■□□□□ 0.82
SAMMSON-204ENST00000641014 TOPBP1Q92547 1522 aa20.14■□□□□ 0.81
SAMMSON-204ENST00000641014 DNMBPQ6XZF7 1577 aa20.12■□□□□ 0.81
SAMMSON-204ENST00000641014 DNAJC5Q9H3Z4 198 aa20.11■□□□□ 0.81
SAMMSON-204ENST00000641014 IFT140Q96RY7 1462 aa20.05■□□□□ 0.8
SAMMSON-204ENST00000641014 TARBP1Q13395 1621 aaKnown RBP19.97■□□□□ 0.79
SAMMSON-204ENST00000641014 POLA1P09884 1462 aaPredicted RBP19.97■□□□□ 0.79
SAMMSON-204ENST00000641014 CUX1P39880 1505 aa19.95■□□□□ 0.78
SAMMSON-204ENST00000641014 ZNF608Q9ULD9 1512 aaPredicted RBP19.93■□□□□ 0.78
SAMMSON-204ENST00000641014 EIF4G3O43432 1585 aaKnown RBP19.89■□□□□ 0.77
SAMMSON-204ENST00000641014 FGD5Q6ZNL6 1462 aa19.89■□□□□ 0.77
SAMMSON-204ENST00000641014 SOGA1O94964 1423 aa19.85■□□□□ 0.77
SAMMSON-204ENST00000641014 RAD54L2Q9Y4B4 1467 aa19.85■□□□□ 0.77
SAMMSON-204ENST00000641014 WDR97A6NE52 1622 aa19.84■□□□□ 0.77
SAMMSON-204ENST00000641014 BIVM-ERCC5R4GMW8 1640 aa19.8■□□□□ 0.76
SAMMSON-204ENST00000641014 AQRO60306 1485 aaKnown RBP eCLIP19.8■□□□□ 0.76
SAMMSON-204ENST00000641014 TOP2BQ02880 1626 aa19.77■□□□□ 0.76
SAMMSON-204ENST00000641014 WRNQ14191 1432 aaPredicted RBP eCLIP19.76■□□□□ 0.75
SAMMSON-204ENST00000641014 SYNJ1O43426 1573 aa19.74■□□□□ 0.75
SAMMSON-204ENST00000641014 TDRD9Q8NDG6 1382 aaKnown RBP19.72■□□□□ 0.75
SAMMSON-204ENST00000641014 OSCARQ8IYS5 282 aa19.72■□□□□ 0.75
SAMMSON-204ENST00000641014 ABCA10Q8WWZ4 1543 aa19.71■□□□□ 0.75
SAMMSON-204ENST00000641014 CHD1O14646 1710 aa19.67■□□□□ 0.74
SAMMSON-204ENST00000641014 ABCA5Q8WWZ7 1642 aa19.67■□□□□ 0.74
SAMMSON-204ENST00000641014 GRIN2BQ13224 1484 aa19.65■□□□□ 0.74
SAMMSON-204ENST00000641014 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
SAMMSON-204ENST00000641014 GAPVD1Q14C86 1478 aa19.64■□□□□ 0.73
SAMMSON-204ENST00000641014 MAGI1Q96QZ7 1491 aaPredicted RBP19.63■□□□□ 0.73
SAMMSON-204ENST00000641014 SNAPC4Q5SXM2 1469 aa19.62■□□□□ 0.73
SAMMSON-204ENST00000641014 SYNJ2O15056 1496 aa19.55■□□□□ 0.72
SAMMSON-204ENST00000641014 FBLN2P98095 1184 aa19.5■□□□□ 0.71
SAMMSON-204ENST00000641014 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
SAMMSON-204ENST00000641014 CHMP7Q8WUX9 453 aaPredicted RBP19.48■□□□□ 0.71
SAMMSON-204ENST00000641014 RIMBP3CA6NJZ7 1639 aa19.47■□□□□ 0.71
SAMMSON-204ENST00000641014 RIMBP3BA6NNM3 1639 aa19.47■□□□□ 0.71
SAMMSON-204ENST00000641014 RIMBP3Q9UFD9 1639 aa19.47■□□□□ 0.71
SAMMSON-204ENST00000641014 CLASP1Q7Z460 1538 aa19.47■□□□□ 0.71
SAMMSON-204ENST00000641014 ADAMTS12P58397 1594 aa19.46■□□□□ 0.71
SAMMSON-204ENST00000641014 MAPK8IP2Q13387 824 aaPredicted RBP19.46■□□□□ 0.71
SAMMSON-204ENST00000641014 SCAF1Q9H7N4 1312 aaKnown RBP19.45■□□□□ 0.7
SAMMSON-204ENST00000641014 ARHGEF11O15085 1522 aa19.44■□□□□ 0.7
SAMMSON-204ENST00000641014 DMRT2Q9Y5R5 561 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms