RNA–Protein interactions for RNA: ENST00000640840.1

PRICKLE1-220, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 5

Gene PRICKLE1, Length 3,735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-220ENST00000640840 NISCHQ9Y2I1 1504 aa14.15□□□□□ -0.14
PRICKLE1-220ENST00000640840 CCDC180Q9P1Z9 1646 aa12.66□□□□□ -0.38
PRICKLE1-220ENST00000640840 ABCC9O60706 1549 aa12.12□□□□□ -0.47
PRICKLE1-220ENST00000640840 MYO15BQ96JP2 1530 aa11.84□□□□□ -0.51
PRICKLE1-220ENST00000640840 ZCCHC6Q5VYS8 1495 aaKnown RBP11.83□□□□□ -0.52
PRICKLE1-220ENST00000640840 NACADO15069 1562 aa11.81□□□□□ -0.52
PRICKLE1-220ENST00000640840 DCAF1Q9Y4B6 1507 aa11.8□□□□□ -0.52
PRICKLE1-220ENST00000640840 RB1CC1Q8TDY2 1594 aa11.78□□□□□ -0.52
PRICKLE1-220ENST00000640840 UNC13AQ9UPW8 1703 aa11.66□□□□□ -0.54
PRICKLE1-220ENST00000640840 BICRAQ9NZM4 1560 aa11.51□□□□□ -0.57
PRICKLE1-220ENST00000640840 DCAF8L2P0C7V8 631 aa11.45□□□□□ -0.58
PRICKLE1-220ENST00000640840 SCRIBQ14160 1630 aa11.41□□□□□ -0.58
PRICKLE1-220ENST00000640840 SHROOM4Q9ULL8 1493 aa11.4□□□□□ -0.58
PRICKLE1-220ENST00000640840 PABPN1Q86U42 306 aaKnown RBP eCLIP11.26□□□□□ -0.61
PRICKLE1-220ENST00000640840 EIF4G1Q04637 1599 aaKnown RBP11.14□□□□□ -0.63
PRICKLE1-220ENST00000640840 DNAJC5BQ9UF47 199 aa11.1□□□□□ -0.63
PRICKLE1-220ENST00000640840 CC2D2AQ9P2K1 1620 aa11.07□□□□□ -0.64
PRICKLE1-220ENST00000640840 SMARCA4P51532 1647 aa10.99□□□□□ -0.65
PRICKLE1-220ENST00000640840 CECR2Q9BXF3 1484 aa10.98□□□□□ -0.65
PRICKLE1-220ENST00000640840 PEG3Q9GZU2 1588 aa10.96□□□□□ -0.65
PRICKLE1-220ENST00000640840 BAZ1AQ9NRL2 1556 aaPredicted RBP10.95□□□□□ -0.66
PRICKLE1-220ENST00000640840 MROH2BQ7Z745 1585 aa10.89□□□□□ -0.67
PRICKLE1-220ENST00000640840 NCAPD3P42695 1498 aa10.88□□□□□ -0.67
PRICKLE1-220ENST00000640840 ATAD2BQ9ULI0 1458 aa10.88□□□□□ -0.67
PRICKLE1-220ENST00000640840 HMGXB3Q12766 1538 aa10.87□□□□□ -0.67
PRICKLE1-220ENST00000640840 SMARCA2P51531 1590 aa10.87□□□□□ -0.67
PRICKLE1-220ENST00000640840 WIZO95785 1651 aa10.79□□□□□ -0.68
PRICKLE1-220ENST00000640840 RSF1Q96T23 1441 aaPredicted RBP10.76□□□□□ -0.69
PRICKLE1-220ENST00000640840 BAZ1BQ9UIG0 1483 aaKnown RBP10.74□□□□□ -0.69
PRICKLE1-220ENST00000640840 TOP2AP11388 1531 aaKnown RBP10.69□□□□□ -0.7
PRICKLE1-220ENST00000640840 LAMC3Q9Y6N6 1575 aa10.6□□□□□ -0.71
PRICKLE1-220ENST00000640840 PRDM2Q13029 1718 aa10.57□□□□□ -0.72
PRICKLE1-220ENST00000640840 NESP48681 1621 aa10.55□□□□□ -0.72
PRICKLE1-220ENST00000640840 CCDC88BA6NC98 1476 aa10.52□□□□□ -0.73
PRICKLE1-220ENST00000640840 KIF21AQ7Z4S6 1674 aa10.52□□□□□ -0.73
PRICKLE1-220ENST00000640840 CFTRP13569 1480 aa10.51□□□□□ -0.73
PRICKLE1-220ENST00000640840 CADPSQ9ULU8 1353 aa10.5□□□□□ -0.73
PRICKLE1-220ENST00000640840 THOC2Q8NI27 1593 aaKnown RBP10.5□□□□□ -0.73
PRICKLE1-220ENST00000640840 PDS5BQ9NTI5 1447 aa10.42□□□□□ -0.74
PRICKLE1-220ENST00000640840 CUX2O14529 1486 aa10.41□□□□□ -0.74
PRICKLE1-220ENST00000640840 WDR62O43379 1518 aa10.41□□□□□ -0.74
PRICKLE1-220ENST00000640840 ERCC6Q03468 1493 aa10.4□□□□□ -0.75
PRICKLE1-220ENST00000640840 FANCD2Q9BXW9 1451 aa10.39□□□□□ -0.75
PRICKLE1-220ENST00000640840 MRC2Q9UBG0 1479 aa10.36□□□□□ -0.75
PRICKLE1-220ENST00000640840 CEP164Q9UPV0 1460 aa10.36□□□□□ -0.75
PRICKLE1-220ENST00000640840 URB2Q14146 1524 aaKnown RBP10.33□□□□□ -0.76
PRICKLE1-220ENST00000640840 SUPT5HO00267 1087 aaKnown RBP10.29□□□□□ -0.76
PRICKLE1-220ENST00000640840 DNMBPQ6XZF7 1577 aa10.28□□□□□ -0.76
PRICKLE1-220ENST00000640840 TOPBP1Q92547 1522 aa10.26□□□□□ -0.77
PRICKLE1-220ENST00000640840 ABCC8Q09428 1581 aa10.25□□□□□ -0.77
PRICKLE1-220ENST00000640840 CUX1P39880 1505 aa10.22□□□□□ -0.77
PRICKLE1-220ENST00000640840 TARBP1Q13395 1621 aaKnown RBP10.22□□□□□ -0.77
PRICKLE1-220ENST00000640840 BIVM-ERCC5R4GMW8 1640 aa10.22□□□□□ -0.77
PRICKLE1-220ENST00000640840 WDR97A6NE52 1622 aa10.21□□□□□ -0.78
PRICKLE1-220ENST00000640840 TOP2BQ02880 1626 aa10.18□□□□□ -0.78
PRICKLE1-220ENST00000640840 POLA1P09884 1462 aaPredicted RBP10.17□□□□□ -0.78
PRICKLE1-220ENST00000640840 IFT140Q96RY7 1462 aa10.17□□□□□ -0.78
PRICKLE1-220ENST00000640840 SYNJ1O43426 1573 aa10.16□□□□□ -0.78
PRICKLE1-220ENST00000640840 FGD5Q6ZNL6 1462 aa10.13□□□□□ -0.79
PRICKLE1-220ENST00000640840 EIF4G3O43432 1585 aaKnown RBP10.13□□□□□ -0.79
PRICKLE1-220ENST00000640840 ZNF608Q9ULD9 1512 aaPredicted RBP10.11□□□□□ -0.79
PRICKLE1-220ENST00000640840 ABCA5Q8WWZ7 1642 aa10.1□□□□□ -0.79
PRICKLE1-220ENST00000640840 WRNQ14191 1432 aaPredicted RBP eCLIP10.09□□□□□ -0.79
PRICKLE1-220ENST00000640840 ABCA10Q8WWZ4 1543 aa10.08□□□□□ -0.8
PRICKLE1-220ENST00000640840 RAD54L2Q9Y4B4 1467 aa10.08□□□□□ -0.8
PRICKLE1-220ENST00000640840 PBRM1Q86U86 1689 aa10.07□□□□□ -0.8
PRICKLE1-220ENST00000640840 SOGA1O94964 1423 aa10.06□□□□□ -0.8
PRICKLE1-220ENST00000640840 AQRO60306 1485 aaKnown RBP eCLIP10.02□□□□□ -0.81
PRICKLE1-220ENST00000640840 CHD1O14646 1710 aa10.01□□□□□ -0.81
PRICKLE1-220ENST00000640840 MAGI1Q96QZ7 1491 aaPredicted RBP9.98□□□□□ -0.81
PRICKLE1-220ENST00000640840 GRIN2BQ13224 1484 aa9.98□□□□□ -0.81
PRICKLE1-220ENST00000640840 GAPVD1Q14C86 1478 aa9.97□□□□□ -0.81
PRICKLE1-220ENST00000640840 ERICH3Q5RHP9 1530 aa9.97□□□□□ -0.81
PRICKLE1-220ENST00000640840 TDRD9Q8NDG6 1382 aaKnown RBP9.97□□□□□ -0.81
PRICKLE1-220ENST00000640840 ADAMTS12P58397 1594 aa9.96□□□□□ -0.81
PRICKLE1-220ENST00000640840 SNAPC4Q5SXM2 1469 aa9.96□□□□□ -0.82
PRICKLE1-220ENST00000640840 DNAJC5Q9H3Z4 198 aa9.93□□□□□ -0.82
PRICKLE1-220ENST00000640840 SYNJ2O15056 1496 aa9.93□□□□□ -0.82
PRICKLE1-220ENST00000640840 CLASP1Q7Z460 1538 aa9.92□□□□□ -0.82
PRICKLE1-220ENST00000640840 CUL7Q14999 1698 aa9.91□□□□□ -0.82
PRICKLE1-220ENST00000640840 FHAD1B1AJZ9 1412 aa9.87□□□□□ -0.83
PRICKLE1-220ENST00000640840 GRIN2AQ12879 1464 aa9.87□□□□□ -0.83
PRICKLE1-220ENST00000640840 CEP170Q5SW79 1584 aa9.87□□□□□ -0.83
PRICKLE1-220ENST00000640840 KIF27Q86VH2 1401 aa9.86□□□□□ -0.83
PRICKLE1-220ENST00000640840 SHROOM2Q13796 1616 aa9.86□□□□□ -0.83
PRICKLE1-220ENST00000640840 NUP160Q12769 1436 aa9.86□□□□□ -0.83
PRICKLE1-220ENST00000640840 IGF1RP08069 1367 aa9.86□□□□□ -0.83
PRICKLE1-220ENST00000640840 RUSC2Q8N2Y8 1516 aa9.84□□□□□ -0.83
PRICKLE1-220ENST00000640840 OSCARQ8IYS5 282 aa9.83□□□□□ -0.84
PRICKLE1-220ENST00000640840 RIMBP3CA6NJZ7 1639 aa9.83□□□□□ -0.84
PRICKLE1-220ENST00000640840 RIMBP3BA6NNM3 1639 aa9.83□□□□□ -0.84
PRICKLE1-220ENST00000640840 RIMBP3Q9UFD9 1639 aa9.83□□□□□ -0.84
PRICKLE1-220ENST00000640840 ARHGEF11O15085 1522 aa9.79□□□□□ -0.84
PRICKLE1-220ENST00000640840 PRXQ9BXM0 1461 aa9.78□□□□□ -0.84
PRICKLE1-220ENST00000640840 CHMP7Q8WUX9 453 aaPredicted RBP9.76□□□□□ -0.85
PRICKLE1-220ENST00000640840 CTTNBP2Q8WZ74 1663 aa9.75□□□□□ -0.85
PRICKLE1-220ENST00000640840 TRIM41Q8WV44 630 aa9.75□□□□□ -0.85
PRICKLE1-220ENST00000640840 CHIC1Q5VXU3 224 aa9.75□□□□□ -0.85
PRICKLE1-220ENST00000640840 CARMIL1Q5VZK9 1371 aa9.75□□□□□ -0.85
PRICKLE1-220ENST00000640840 EEA1Q15075 1411 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms