RNA–Protein interactions for RNA: ENST00000640736.1

RTTN-221, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,132 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-221ENST00000640736 NISCHQ9Y2I1 1504 aa34.13■■■■□ 3.05
RTTN-221ENST00000640736 AEBP2Q6ZN18 517 aaPredicted RBP30.65■■■□□ 2.5
RTTN-221ENST00000640736 CCDC180Q9P1Z9 1646 aa30.54■■■□□ 2.48
RTTN-221ENST00000640736 ABCC9O60706 1549 aa30.28■■■□□ 2.44
RTTN-221ENST00000640736 CHIC1Q5VXU3 224 aa29.42■■■□□ 2.3
RTTN-221ENST00000640736 RB1CC1Q8TDY2 1594 aa28.92■■■□□ 2.22
RTTN-221ENST00000640736 NACADO15069 1562 aa28.77■■■□□ 2.2
RTTN-221ENST00000640736 DCAF8L2P0C7V8 631 aa28.75■■■□□ 2.19
RTTN-221ENST00000640736 MYO15BQ96JP2 1530 aa28.43■■■□□ 2.14
RTTN-221ENST00000640736 ZCCHC6Q5VYS8 1495 aaKnown RBP28.35■■■□□ 2.13
RTTN-221ENST00000640736 UNC13AQ9UPW8 1703 aa28.35■■■□□ 2.13
RTTN-221ENST00000640736 PABPN1Q86U42 306 aaKnown RBP eCLIP28.23■■■□□ 2.11
RTTN-221ENST00000640736 DCAF1Q9Y4B6 1507 aa28.18■■■□□ 2.1
RTTN-221ENST00000640736 DNAJC5BQ9UF47 199 aa28.11■■■□□ 2.09
RTTN-221ENST00000640736 BICRAQ9NZM4 1560 aa28.07■■■□□ 2.08
RTTN-221ENST00000640736 SCRIBQ14160 1630 aa27.89■■■□□ 2.05
RTTN-221ENST00000640736 SHROOM4Q9ULL8 1493 aa27.67■■■□□ 2.02
RTTN-221ENST00000640736 CC2D2AQ9P2K1 1620 aa27.38■■□□□ 1.97
RTTN-221ENST00000640736 EIF4G1Q04637 1599 aaKnown RBP27.36■■□□□ 1.97
RTTN-221ENST00000640736 CECR2Q9BXF3 1484 aa27.23■■□□□ 1.95
RTTN-221ENST00000640736 SMARCA4P51532 1647 aa26.6■■□□□ 1.85
RTTN-221ENST00000640736 NCAPD3P42695 1498 aa26.53■■□□□ 1.84
RTTN-221ENST00000640736 ATAD2BQ9ULI0 1458 aa26.52■■□□□ 1.84
RTTN-221ENST00000640736 BAZ1AQ9NRL2 1556 aaPredicted RBP26.48■■□□□ 1.83
RTTN-221ENST00000640736 SMARCA2P51531 1590 aa26.47■■□□□ 1.83
RTTN-221ENST00000640736 HMGXB3Q12766 1538 aa26.39■■□□□ 1.82
RTTN-221ENST00000640736 MROH2BQ7Z745 1585 aa26.33■■□□□ 1.8
RTTN-221ENST00000640736 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
RTTN-221ENST00000640736 PEG3Q9GZU2 1588 aa26.29■■□□□ 1.8
RTTN-221ENST00000640736 ERCC6Q03468 1493 aa26.13■■□□□ 1.77
RTTN-221ENST00000640736 NESP48681 1621 aa26.09■■□□□ 1.77
RTTN-221ENST00000640736 WIZO95785 1651 aa26.06■■□□□ 1.76
RTTN-221ENST00000640736 SENP3Q9H4L4 574 aaPredicted RBP26.03■■□□□ 1.76
RTTN-221ENST00000640736 CUX2O14529 1486 aa25.94■■□□□ 1.74
RTTN-221ENST00000640736 LAMC3Q9Y6N6 1575 aa25.93■■□□□ 1.74
RTTN-221ENST00000640736 RSF1Q96T23 1441 aaPredicted RBP25.86■■□□□ 1.73
RTTN-221ENST00000640736 PHF23Q9BUL5 403 aaPredicted RBP25.85■■□□□ 1.73
RTTN-221ENST00000640736 KIF21AQ7Z4S6 1674 aa25.8■■□□□ 1.72
RTTN-221ENST00000640736 THOC2Q8NI27 1593 aaKnown RBP25.78■■□□□ 1.72
RTTN-221ENST00000640736 PDS5BQ9NTI5 1447 aa25.75■■□□□ 1.71
RTTN-221ENST00000640736 CADPSQ9ULU8 1353 aa25.75■■□□□ 1.71
RTTN-221ENST00000640736 TOP2AP11388 1531 aaKnown RBP25.71■■□□□ 1.71
RTTN-221ENST00000640736 DNAJC5Q9H3Z4 198 aa25.59■■□□□ 1.69
RTTN-221ENST00000640736 MRC2Q9UBG0 1479 aa25.53■■□□□ 1.68
RTTN-221ENST00000640736 CFTRP13569 1480 aa25.52■■□□□ 1.68
RTTN-221ENST00000640736 CEP164Q9UPV0 1460 aa25.5■■□□□ 1.67
RTTN-221ENST00000640736 FANCD2Q9BXW9 1451 aa25.49■■□□□ 1.67
RTTN-221ENST00000640736 WDR62O43379 1518 aa25.47■■□□□ 1.67
RTTN-221ENST00000640736 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
RTTN-221ENST00000640736 PRDM2Q13029 1718 aa25.38■■□□□ 1.65
RTTN-221ENST00000640736 URB2Q14146 1524 aaKnown RBP25.27■■□□□ 1.64
RTTN-221ENST00000640736 TOPBP1Q92547 1522 aa25.04■■□□□ 1.6
RTTN-221ENST00000640736 ABCC8Q09428 1581 aa24.98■■□□□ 1.59
RTTN-221ENST00000640736 DNMBPQ6XZF7 1577 aa24.98■■□□□ 1.59
RTTN-221ENST00000640736 SUPT5HO00267 1087 aaKnown RBP24.97■■□□□ 1.59
RTTN-221ENST00000640736 IFT140Q96RY7 1462 aa24.96■■□□□ 1.59
RTTN-221ENST00000640736 ZNF608Q9ULD9 1512 aaPredicted RBP24.91■■□□□ 1.58
RTTN-221ENST00000640736 EIF4G3O43432 1585 aaKnown RBP24.81■■□□□ 1.56
RTTN-221ENST00000640736 TARBP1Q13395 1621 aaKnown RBP24.8■■□□□ 1.56
RTTN-221ENST00000640736 OSCARQ8IYS5 282 aa24.8■■□□□ 1.56
RTTN-221ENST00000640736 POLA1P09884 1462 aaPredicted RBP24.8■■□□□ 1.56
RTTN-221ENST00000640736 CUX1P39880 1505 aa24.72■■□□□ 1.55
RTTN-221ENST00000640736 AQRO60306 1485 aaKnown RBP eCLIP24.72■■□□□ 1.55
RTTN-221ENST00000640736 RAD54L2Q9Y4B4 1467 aa24.72■■□□□ 1.55
RTTN-221ENST00000640736 FGD5Q6ZNL6 1462 aa24.7■■□□□ 1.54
RTTN-221ENST00000640736 SOGA1O94964 1423 aa24.69■■□□□ 1.54
RTTN-221ENST00000640736 TRIM41Q8WV44 630 aa24.66■■□□□ 1.54
RTTN-221ENST00000640736 CHD1O14646 1710 aa24.61■■□□□ 1.53
RTTN-221ENST00000640736 TDRD9Q8NDG6 1382 aaKnown RBP24.61■■□□□ 1.53
RTTN-221ENST00000640736 WDR97A6NE52 1622 aa24.54■■□□□ 1.52
RTTN-221ENST00000640736 FBLN2P98095 1184 aa24.53■■□□□ 1.52
RTTN-221ENST00000640736 RIMBP3CA6NJZ7 1639 aa24.5■■□□□ 1.51
RTTN-221ENST00000640736 RIMBP3BA6NNM3 1639 aa24.5■■□□□ 1.51
RTTN-221ENST00000640736 RIMBP3Q9UFD9 1639 aa24.5■■□□□ 1.51
RTTN-221ENST00000640736 SNAPC4Q5SXM2 1469 aa24.49■■□□□ 1.51
RTTN-221ENST00000640736 GRIN2BQ13224 1484 aa24.44■■□□□ 1.5
RTTN-221ENST00000640736 PBRM1Q86U86 1689 aa24.43■■□□□ 1.5
RTTN-221ENST00000640736 ARHGEF11O15085 1522 aa24.43■■□□□ 1.5
RTTN-221ENST00000640736 ABCA10Q8WWZ4 1543 aa24.41■■□□□ 1.5
RTTN-221ENST00000640736 MAGI1Q96QZ7 1491 aaPredicted RBP24.41■■□□□ 1.5
RTTN-221ENST00000640736 BIVM-ERCC5R4GMW8 1640 aa24.41■■□□□ 1.5
RTTN-221ENST00000640736 GAPVD1Q14C86 1478 aa24.4■■□□□ 1.5
RTTN-221ENST00000640736 WRNQ14191 1432 aaPredicted RBP eCLIP24.4■■□□□ 1.5
RTTN-221ENST00000640736 TOP2BQ02880 1626 aa24.39■■□□□ 1.5
RTTN-221ENST00000640736 SYNJ1O43426 1573 aa24.39■■□□□ 1.5
RTTN-221ENST00000640736 ABCA5Q8WWZ7 1642 aa24.38■■□□□ 1.49
RTTN-221ENST00000640736 CHMP7Q8WUX9 453 aaPredicted RBP24.36■■□□□ 1.49
RTTN-221ENST00000640736 SYNJ2O15056 1496 aa24.32■■□□□ 1.48
RTTN-221ENST00000640736 CLASP1Q7Z460 1538 aa24.27■■□□□ 1.48
RTTN-221ENST00000640736 FOXD1Q16676 465 aa24.24■■□□□ 1.47
RTTN-221ENST00000640736 CYB5RLQ6IPT4 315 aa24.23■■□□□ 1.47
RTTN-221ENST00000640736 ARAP1Q96P48 1450 aa24.2■■□□□ 1.47
RTTN-221ENST00000640736 ADAMTS12P58397 1594 aa24.18■■□□□ 1.46
RTTN-221ENST00000640736 GRIN2AQ12879 1464 aa24.13■■□□□ 1.45
RTTN-221ENST00000640736 ERICH3Q5RHP9 1530 aa24.11■■□□□ 1.45
RTTN-221ENST00000640736 FHAD1B1AJZ9 1412 aa24.09■■□□□ 1.45
RTTN-221ENST00000640736 CEP170Q5SW79 1584 aa24.05■■□□□ 1.44
RTTN-221ENST00000640736 NUP160Q12769 1436 aa24.02■■□□□ 1.44
RTTN-221ENST00000640736 ERCC6L2Q5T890 1561 aa23.95■■□□□ 1.42
RTTN-221ENST00000640736 KIF27Q86VH2 1401 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms