RNA–Protein interactions for RNA: ENST00000640043.1

MCF2L2-214, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 5

Gene MCF2L2, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-214ENST00000640043 NISCHQ9Y2I1 1504 aa23.38■■□□□ 1.33
MCF2L2-214ENST00000640043 ABCC9O60706 1549 aa21.34■■□□□ 1.01
MCF2L2-214ENST00000640043 CCDC180Q9P1Z9 1646 aa21.21■□□□□ 0.99
MCF2L2-214ENST00000640043 CHIC1Q5VXU3 224 aa20.99■□□□□ 0.95
MCF2L2-214ENST00000640043 RB1CC1Q8TDY2 1594 aa20.32■□□□□ 0.84
MCF2L2-214ENST00000640043 AEBP2Q6ZN18 517 aaPredicted RBP20.31■□□□□ 0.84
MCF2L2-214ENST00000640043 DNAJC5BQ9UF47 199 aa20.27■□□□□ 0.84
MCF2L2-214ENST00000640043 NACADO15069 1562 aa20.12■□□□□ 0.81
MCF2L2-214ENST00000640043 MYO15BQ96JP2 1530 aa19.81■□□□□ 0.76
MCF2L2-214ENST00000640043 UNC13AQ9UPW8 1703 aa19.79■□□□□ 0.76
MCF2L2-214ENST00000640043 PABPN1Q86U42 306 aaKnown RBP eCLIP19.76■□□□□ 0.75
MCF2L2-214ENST00000640043 DCAF8L2P0C7V8 631 aa19.7■□□□□ 0.74
MCF2L2-214ENST00000640043 BICRAQ9NZM4 1560 aa19.66■□□□□ 0.74
MCF2L2-214ENST00000640043 SHROOM4Q9ULL8 1493 aa19.57■□□□□ 0.72
MCF2L2-214ENST00000640043 DCAF1Q9Y4B6 1507 aa19.41■□□□□ 0.7
MCF2L2-214ENST00000640043 CECR2Q9BXF3 1484 aa19.33■□□□□ 0.68
MCF2L2-214ENST00000640043 CC2D2AQ9P2K1 1620 aa19.33■□□□□ 0.68
MCF2L2-214ENST00000640043 ZCCHC6Q5VYS8 1495 aaKnown RBP19.31■□□□□ 0.68
MCF2L2-214ENST00000640043 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
MCF2L2-214ENST00000640043 SCRIBQ14160 1630 aa19.13■□□□□ 0.65
MCF2L2-214ENST00000640043 DNAJC5Q9H3Z4 198 aa18.98■□□□□ 0.63
MCF2L2-214ENST00000640043 CUX2O14529 1486 aa18.69■□□□□ 0.58
MCF2L2-214ENST00000640043 PHF23Q9BUL5 403 aaPredicted RBP18.62■□□□□ 0.57
MCF2L2-214ENST00000640043 NCAPD3P42695 1498 aa18.57■□□□□ 0.56
MCF2L2-214ENST00000640043 ERCC6Q03468 1493 aa18.52■□□□□ 0.55
MCF2L2-214ENST00000640043 SLC24A1O60721 1099 aa18.44■□□□□ 0.54
MCF2L2-214ENST00000640043 HMGXB3Q12766 1538 aa18.41■□□□□ 0.54
MCF2L2-214ENST00000640043 SMARCA2P51531 1590 aa18.4■□□□□ 0.54
MCF2L2-214ENST00000640043 ATAD2BQ9ULI0 1458 aa18.39■□□□□ 0.54
MCF2L2-214ENST00000640043 EHMT2Q96KQ7 1210 aa18.32■□□□□ 0.52
MCF2L2-214ENST00000640043 SMARCA4P51532 1647 aa18.3■□□□□ 0.52
MCF2L2-214ENST00000640043 NESP48681 1621 aa18.22■□□□□ 0.51
MCF2L2-214ENST00000640043 PEG3Q9GZU2 1588 aa18.21■□□□□ 0.51
MCF2L2-214ENST00000640043 BAZ1AQ9NRL2 1556 aaPredicted RBP18.21■□□□□ 0.51
MCF2L2-214ENST00000640043 LAMC3Q9Y6N6 1575 aa18.21■□□□□ 0.51
MCF2L2-214ENST00000640043 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
MCF2L2-214ENST00000640043 THOC2Q8NI27 1593 aaKnown RBP18.2■□□□□ 0.5
MCF2L2-214ENST00000640043 PDS5BQ9NTI5 1447 aa18.1■□□□□ 0.49
MCF2L2-214ENST00000640043 KIF21AQ7Z4S6 1674 aa18.03■□□□□ 0.48
MCF2L2-214ENST00000640043 CADPSQ9ULU8 1353 aa17.94■□□□□ 0.46
MCF2L2-214ENST00000640043 MROH2BQ7Z745 1585 aa17.94■□□□□ 0.46
MCF2L2-214ENST00000640043 MRC2Q9UBG0 1479 aa17.93■□□□□ 0.46
MCF2L2-214ENST00000640043 WDR62O43379 1518 aa17.91■□□□□ 0.46
MCF2L2-214ENST00000640043 TRIM41Q8WV44 630 aa17.87■□□□□ 0.45
MCF2L2-214ENST00000640043 PLPPR3Q6T4P5 718 aa17.82■□□□□ 0.44
MCF2L2-214ENST00000640043 CEP164Q9UPV0 1460 aa17.78■□□□□ 0.44
MCF2L2-214ENST00000640043 OSCARQ8IYS5 282 aa17.72■□□□□ 0.43
MCF2L2-214ENST00000640043 FANCD2Q9BXW9 1451 aa17.71■□□□□ 0.43
MCF2L2-214ENST00000640043 WIZO95785 1651 aa17.7■□□□□ 0.42
MCF2L2-214ENST00000640043 CFTRP13569 1480 aa17.69■□□□□ 0.42
MCF2L2-214ENST00000640043 URB2Q14146 1524 aaKnown RBP17.56■□□□□ 0.4
MCF2L2-214ENST00000640043 TOP2AP11388 1531 aaKnown RBP17.53■□□□□ 0.4
MCF2L2-214ENST00000640043 PRDM2Q13029 1718 aa17.52■□□□□ 0.4
MCF2L2-214ENST00000640043 RIMBP3CA6NJZ7 1639 aa17.48■□□□□ 0.39
MCF2L2-214ENST00000640043 RIMBP3BA6NNM3 1639 aa17.48■□□□□ 0.39
MCF2L2-214ENST00000640043 RIMBP3Q9UFD9 1639 aa17.48■□□□□ 0.39
MCF2L2-214ENST00000640043 RSF1Q96T23 1441 aaPredicted RBP17.47■□□□□ 0.39
MCF2L2-214ENST00000640043 IFT140Q96RY7 1462 aa17.47■□□□□ 0.39
MCF2L2-214ENST00000640043 KCNA4P22459 653 aa17.42■□□□□ 0.38
MCF2L2-214ENST00000640043 ARHGEF11O15085 1522 aa17.42■□□□□ 0.38
MCF2L2-214ENST00000640043 ABCC8Q09428 1581 aa17.4■□□□□ 0.38
MCF2L2-214ENST00000640043 CSRNP3Q8WYN3 585 aa17.37■□□□□ 0.37
MCF2L2-214ENST00000640043 ZNF608Q9ULD9 1512 aaPredicted RBP17.36■□□□□ 0.37
MCF2L2-214ENST00000640043 TOPBP1Q92547 1522 aa17.34■□□□□ 0.37
MCF2L2-214ENST00000640043 EIF4G3O43432 1585 aaKnown RBP17.3■□□□□ 0.36
MCF2L2-214ENST00000640043 CCDC88BA6NC98 1476 aa17.28■□□□□ 0.36
MCF2L2-214ENST00000640043 DNMBPQ6XZF7 1577 aa17.28■□□□□ 0.36
MCF2L2-214ENST00000640043 SENP3Q9H4L4 574 aaPredicted RBP17.26■□□□□ 0.35
MCF2L2-214ENST00000640043 CYB5RLQ6IPT4 315 aa17.24■□□□□ 0.35
MCF2L2-214ENST00000640043 TARBP1Q13395 1621 aaKnown RBP17.23■□□□□ 0.35
MCF2L2-214ENST00000640043 CHD1O14646 1710 aa17.23■□□□□ 0.35
MCF2L2-214ENST00000640043 AMER1Q5JTC6 1135 aaPredicted RBP17.2■□□□□ 0.34
MCF2L2-214ENST00000640043 ARAP1Q96P48 1450 aa17.19■□□□□ 0.34
MCF2L2-214ENST00000640043 RTN4Q9NQC3 1192 aaKnown RBP17.17■□□□□ 0.34
MCF2L2-214ENST00000640043 WDR97A6NE52 1622 aa17.17■□□□□ 0.34
MCF2L2-214ENST00000640043 AQRO60306 1485 aaKnown RBP eCLIP17.17■□□□□ 0.34
MCF2L2-214ENST00000640043 TRHP20396 242 aaPredicted RBP17.15■□□□□ 0.34
MCF2L2-214ENST00000640043 POLA1P09884 1462 aaPredicted RBP17.13■□□□□ 0.33
MCF2L2-214ENST00000640043 FBLN2P98095 1184 aa17.09■□□□□ 0.33
MCF2L2-214ENST00000640043 CLASP1Q7Z460 1538 aa17.06■□□□□ 0.32
MCF2L2-214ENST00000640043 SYNJ1O43426 1573 aa17.05■□□□□ 0.32
MCF2L2-214ENST00000640043 MAGI1Q96QZ7 1491 aaPredicted RBP17.05■□□□□ 0.32
MCF2L2-214ENST00000640043 SOGA1O94964 1423 aa17.04■□□□□ 0.32
MCF2L2-214ENST00000640043 RAD54L2Q9Y4B4 1467 aa17.01■□□□□ 0.31
MCF2L2-214ENST00000640043 TDRD9Q8NDG6 1382 aaKnown RBP17.01■□□□□ 0.31
MCF2L2-214ENST00000640043 SNAPC4Q5SXM2 1469 aa17■□□□□ 0.31
MCF2L2-214ENST00000640043 CHMP7Q8WUX9 453 aaPredicted RBP16.99■□□□□ 0.31
MCF2L2-214ENST00000640043 GRIN2BQ13224 1484 aa16.98■□□□□ 0.31
MCF2L2-214ENST00000640043 SYNJ2O15056 1496 aa16.97■□□□□ 0.31
MCF2L2-214ENST00000640043 FGD5Q6ZNL6 1462 aa16.96■□□□□ 0.31
MCF2L2-214ENST00000640043 SLC4A1APQ9BWU0 796 aaKnown RBP16.91■□□□□ 0.3
MCF2L2-214ENST00000640043 CUX1P39880 1505 aa16.89■□□□□ 0.29
MCF2L2-214ENST00000640043 GAPVD1Q14C86 1478 aa16.88■□□□□ 0.29
MCF2L2-214ENST00000640043 PBRM1Q86U86 1689 aa16.86■□□□□ 0.29
MCF2L2-214ENST00000640043 ABCA10Q8WWZ4 1543 aa16.82■□□□□ 0.28
MCF2L2-214ENST00000640043 ABCA5Q8WWZ7 1642 aa16.8■□□□□ 0.28
MCF2L2-214ENST00000640043 GRIN2AQ12879 1464 aa16.74■□□□□ 0.27
MCF2L2-214ENST00000640043 NUP160Q12769 1436 aa16.72■□□□□ 0.27
MCF2L2-214ENST00000640043 SHROOM2Q13796 1616 aa16.7■□□□□ 0.26
MCF2L2-214ENST00000640043 ADAMTS12P58397 1594 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms