RNA–Protein interactions for RNA: ENST00000639673.1

TRIM43B-202, Transcript of tripartite motif containing 43B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43B, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43B-202ENST00000639673 NISCHQ9Y2I1 1504 aa24.48■■□□□ 1.51
TRIM43B-202ENST00000639673 CCDC180Q9P1Z9 1646 aa21.82■■□□□ 1.08
TRIM43B-202ENST00000639673 ABCC9O60706 1549 aa21.57■■□□□ 1.04
TRIM43B-202ENST00000639673 RB1CC1Q8TDY2 1594 aa20.63■□□□□ 0.89
TRIM43B-202ENST00000639673 NACADO15069 1562 aa20.56■□□□□ 0.88
TRIM43B-202ENST00000639673 DCAF8L2P0C7V8 631 aa20.54■□□□□ 0.88
TRIM43B-202ENST00000639673 ZCCHC6Q5VYS8 1495 aaKnown RBP20.36■□□□□ 0.85
TRIM43B-202ENST00000639673 MYO15BQ96JP2 1530 aa20.35■□□□□ 0.85
TRIM43B-202ENST00000639673 DCAF1Q9Y4B6 1507 aa20.21■□□□□ 0.83
TRIM43B-202ENST00000639673 UNC13AQ9UPW8 1703 aa20.19■□□□□ 0.82
TRIM43B-202ENST00000639673 PABPN1Q86U42 306 aaKnown RBP eCLIP20.13■□□□□ 0.81
TRIM43B-202ENST00000639673 BICRAQ9NZM4 1560 aa20.05■□□□□ 0.8
TRIM43B-202ENST00000639673 DNAJC5BQ9UF47 199 aa19.97■□□□□ 0.79
TRIM43B-202ENST00000639673 SCRIBQ14160 1630 aa19.95■□□□□ 0.78
TRIM43B-202ENST00000639673 SHROOM4Q9ULL8 1493 aa19.76■□□□□ 0.75
TRIM43B-202ENST00000639673 EIF4G1Q04637 1599 aaKnown RBP19.53■□□□□ 0.72
TRIM43B-202ENST00000639673 CC2D2AQ9P2K1 1620 aa19.49■□□□□ 0.71
TRIM43B-202ENST00000639673 CECR2Q9BXF3 1484 aa19.38■□□□□ 0.69
TRIM43B-202ENST00000639673 SMARCA4P51532 1647 aa19.04■□□□□ 0.64
TRIM43B-202ENST00000639673 ATAD2BQ9ULI0 1458 aa18.98■□□□□ 0.63
TRIM43B-202ENST00000639673 BAZ1AQ9NRL2 1556 aaPredicted RBP18.97■□□□□ 0.63
TRIM43B-202ENST00000639673 NCAPD3P42695 1498 aa18.97■□□□□ 0.63
TRIM43B-202ENST00000639673 SMARCA2P51531 1590 aa18.92■□□□□ 0.62
TRIM43B-202ENST00000639673 MROH2BQ7Z745 1585 aa18.89■□□□□ 0.61
TRIM43B-202ENST00000639673 HMGXB3Q12766 1538 aa18.87■□□□□ 0.61
TRIM43B-202ENST00000639673 PEG3Q9GZU2 1588 aa18.83■□□□□ 0.61
TRIM43B-202ENST00000639673 BAZ1BQ9UIG0 1483 aaKnown RBP18.81■□□□□ 0.6
TRIM43B-202ENST00000639673 WIZO95785 1651 aa18.68■□□□□ 0.58
TRIM43B-202ENST00000639673 NESP48681 1621 aa18.62■□□□□ 0.57
TRIM43B-202ENST00000639673 ERCC6Q03468 1493 aa18.59■□□□□ 0.57
TRIM43B-202ENST00000639673 RSF1Q96T23 1441 aaPredicted RBP18.59■□□□□ 0.57
TRIM43B-202ENST00000639673 LAMC3Q9Y6N6 1575 aa18.5■□□□□ 0.55
TRIM43B-202ENST00000639673 TOP2AP11388 1531 aaKnown RBP18.45■□□□□ 0.54
TRIM43B-202ENST00000639673 CUX2O14529 1486 aa18.43■□□□□ 0.54
TRIM43B-202ENST00000639673 CADPSQ9ULU8 1353 aa18.42■□□□□ 0.54
TRIM43B-202ENST00000639673 KIF21AQ7Z4S6 1674 aa18.39■□□□□ 0.53
TRIM43B-202ENST00000639673 PDS5BQ9NTI5 1447 aa18.38■□□□□ 0.53
TRIM43B-202ENST00000639673 THOC2Q8NI27 1593 aaKnown RBP18.37■□□□□ 0.53
TRIM43B-202ENST00000639673 CFTRP13569 1480 aa18.28■□□□□ 0.52
TRIM43B-202ENST00000639673 CCDC88BA6NC98 1476 aa18.23■□□□□ 0.51
TRIM43B-202ENST00000639673 FANCD2Q9BXW9 1451 aa18.22■□□□□ 0.51
TRIM43B-202ENST00000639673 MRC2Q9UBG0 1479 aa18.22■□□□□ 0.51
TRIM43B-202ENST00000639673 CEP164Q9UPV0 1460 aa18.21■□□□□ 0.51
TRIM43B-202ENST00000639673 CHIC1Q5VXU3 224 aa18.19■□□□□ 0.5
TRIM43B-202ENST00000639673 WDR62O43379 1518 aa18.18■□□□□ 0.5
TRIM43B-202ENST00000639673 PRDM2Q13029 1718 aa18.12■□□□□ 0.49
TRIM43B-202ENST00000639673 DNAJC5Q9H3Z4 198 aa18.07■□□□□ 0.48
TRIM43B-202ENST00000639673 URB2Q14146 1524 aaKnown RBP18.06■□□□□ 0.48
TRIM43B-202ENST00000639673 SUPT5HO00267 1087 aaKnown RBP17.99■□□□□ 0.47
TRIM43B-202ENST00000639673 TOPBP1Q92547 1522 aa17.91■□□□□ 0.46
TRIM43B-202ENST00000639673 DNMBPQ6XZF7 1577 aa17.87■□□□□ 0.45
TRIM43B-202ENST00000639673 ABCC8Q09428 1581 aa17.85■□□□□ 0.45
TRIM43B-202ENST00000639673 IFT140Q96RY7 1462 aa17.82■□□□□ 0.44
TRIM43B-202ENST00000639673 ZNF608Q9ULD9 1512 aaPredicted RBP17.81■□□□□ 0.44
TRIM43B-202ENST00000639673 AEBP2Q6ZN18 517 aaPredicted RBP17.77■□□□□ 0.43
TRIM43B-202ENST00000639673 POLA1P09884 1462 aaPredicted RBP17.75■□□□□ 0.43
TRIM43B-202ENST00000639673 TARBP1Q13395 1621 aaKnown RBP17.73■□□□□ 0.43
TRIM43B-202ENST00000639673 CUX1P39880 1505 aa17.72■□□□□ 0.43
TRIM43B-202ENST00000639673 EIF4G3O43432 1585 aaKnown RBP17.72■□□□□ 0.43
TRIM43B-202ENST00000639673 RAD54L2Q9Y4B4 1467 aa17.69■□□□□ 0.42
TRIM43B-202ENST00000639673 FGD5Q6ZNL6 1462 aa17.69■□□□□ 0.42
TRIM43B-202ENST00000639673 AQRO60306 1485 aaKnown RBP eCLIP17.67■□□□□ 0.42
TRIM43B-202ENST00000639673 SOGA1O94964 1423 aa17.66■□□□□ 0.42
TRIM43B-202ENST00000639673 OSCARQ8IYS5 282 aa17.63■□□□□ 0.41
TRIM43B-202ENST00000639673 TDRD9Q8NDG6 1382 aaKnown RBP17.6■□□□□ 0.41
TRIM43B-202ENST00000639673 WDR97A6NE52 1622 aa17.56■□□□□ 0.4
TRIM43B-202ENST00000639673 CHD1O14646 1710 aa17.53■□□□□ 0.4
TRIM43B-202ENST00000639673 WRNQ14191 1432 aaPredicted RBP eCLIP17.52■□□□□ 0.4
TRIM43B-202ENST00000639673 SYNJ1O43426 1573 aa17.52■□□□□ 0.4
TRIM43B-202ENST00000639673 BIVM-ERCC5R4GMW8 1640 aa17.51■□□□□ 0.39
TRIM43B-202ENST00000639673 SNAPC4Q5SXM2 1469 aa17.51■□□□□ 0.39
TRIM43B-202ENST00000639673 TOP2BQ02880 1626 aa17.51■□□□□ 0.39
TRIM43B-202ENST00000639673 ABCA10Q8WWZ4 1543 aa17.49■□□□□ 0.39
TRIM43B-202ENST00000639673 FBLN2P98095 1184 aa17.48■□□□□ 0.39
TRIM43B-202ENST00000639673 GRIN2BQ13224 1484 aa17.48■□□□□ 0.39
TRIM43B-202ENST00000639673 GAPVD1Q14C86 1478 aa17.46■□□□□ 0.39
TRIM43B-202ENST00000639673 PBRM1Q86U86 1689 aa17.45■□□□□ 0.38
TRIM43B-202ENST00000639673 ABCA5Q8WWZ7 1642 aa17.45■□□□□ 0.38
TRIM43B-202ENST00000639673 TRIM41Q8WV44 630 aa17.45■□□□□ 0.38
TRIM43B-202ENST00000639673 MAGI1Q96QZ7 1491 aaPredicted RBP17.44■□□□□ 0.38
TRIM43B-202ENST00000639673 RIMBP3CA6NJZ7 1639 aa17.41■□□□□ 0.38
TRIM43B-202ENST00000639673 RIMBP3BA6NNM3 1639 aa17.41■□□□□ 0.38
TRIM43B-202ENST00000639673 RIMBP3Q9UFD9 1639 aa17.41■□□□□ 0.38
TRIM43B-202ENST00000639673 ARHGEF11O15085 1522 aa17.39■□□□□ 0.37
TRIM43B-202ENST00000639673 CHMP7Q8WUX9 453 aaPredicted RBP17.39■□□□□ 0.37
TRIM43B-202ENST00000639673 SYNJ2O15056 1496 aa17.38■□□□□ 0.37
TRIM43B-202ENST00000639673 CLASP1Q7Z460 1538 aa17.32■□□□□ 0.36
TRIM43B-202ENST00000639673 ADAMTS12P58397 1594 aa17.3■□□□□ 0.36
TRIM43B-202ENST00000639673 ERICH3Q5RHP9 1530 aa17.27■□□□□ 0.35
TRIM43B-202ENST00000639673 GRIN2AQ12879 1464 aa17.27■□□□□ 0.35
TRIM43B-202ENST00000639673 ARAP1Q96P48 1450 aa17.24■□□□□ 0.35
TRIM43B-202ENST00000639673 FHAD1B1AJZ9 1412 aa17.24■□□□□ 0.35
TRIM43B-202ENST00000639673 CYB5RLQ6IPT4 315 aa17.23■□□□□ 0.35
TRIM43B-202ENST00000639673 CEP170Q5SW79 1584 aa17.2■□□□□ 0.34
TRIM43B-202ENST00000639673 NUP160Q12769 1436 aa17.18■□□□□ 0.34
TRIM43B-202ENST00000639673 KIF27Q86VH2 1401 aa17.16■□□□□ 0.34
TRIM43B-202ENST00000639673 IGF1RP08069 1367 aa17.12■□□□□ 0.33
TRIM43B-202ENST00000639673 ERCC6L2Q5T890 1561 aa17.11■□□□□ 0.33
TRIM43B-202ENST00000639673 SHROOM2Q13796 1616 aa17.08■□□□□ 0.32
TRIM43B-202ENST00000639673 CUL7Q14999 1698 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms