RNA–Protein interactions for RNA: ENST00000639596.1

MED17-220, Transcript of mediator complex subunit 17, humanhuman

TSL 5

Gene MED17, Length 2,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-220ENST00000639596 NISCHQ9Y2I1 1504 aa45.74■■■■■ 4.91
MED17-220ENST00000639596 CCDC180Q9P1Z9 1646 aa40.17■■■■■ 4.02
MED17-220ENST00000639596 ABCC9O60706 1549 aa38.54■■■■□ 3.76
MED17-220ENST00000639596 ZCCHC6Q5VYS8 1495 aaKnown RBP38.32■■■■□ 3.72
MED17-220ENST00000639596 DCAF8L2P0C7V8 631 aa37.87■■■■□ 3.65
MED17-220ENST00000639596 DCAF1Q9Y4B6 1507 aa37.81■■■■□ 3.64
MED17-220ENST00000639596 MYO15BQ96JP2 1530 aa37.59■■■■□ 3.61
MED17-220ENST00000639596 NACADO15069 1562 aa37.54■■■■□ 3.6
MED17-220ENST00000639596 RB1CC1Q8TDY2 1594 aa37.36■■■■□ 3.57
MED17-220ENST00000639596 SCRIBQ14160 1630 aa36.86■■■■□ 3.49
MED17-220ENST00000639596 SHROOM4Q9ULL8 1493 aa36.84■■■■□ 3.49
MED17-220ENST00000639596 UNC13AQ9UPW8 1703 aa36.67■■■■□ 3.46
MED17-220ENST00000639596 BICRAQ9NZM4 1560 aa36.32■■■■□ 3.41
MED17-220ENST00000639596 PABPN1Q86U42 306 aaKnown RBP eCLIP36.2■■■■□ 3.39
MED17-220ENST00000639596 CECR2Q9BXF3 1484 aa35.62■■■■□ 3.29
MED17-220ENST00000639596 BAZ1AQ9NRL2 1556 aaPredicted RBP35.35■■■■□ 3.25
MED17-220ENST00000639596 MROH2BQ7Z745 1585 aa35.33■■■■□ 3.25
MED17-220ENST00000639596 SMARCA4P51532 1647 aa35.3■■■■□ 3.24
MED17-220ENST00000639596 RSF1Q96T23 1441 aaPredicted RBP35.24■■■■□ 3.23
MED17-220ENST00000639596 EIF4G1Q04637 1599 aaKnown RBP35.24■■■■□ 3.23
MED17-220ENST00000639596 SUPT5HO00267 1087 aaKnown RBP35.09■■■■□ 3.21
MED17-220ENST00000639596 WIZO95785 1651 aa35.01■■■■□ 3.2
MED17-220ENST00000639596 PEG3Q9GZU2 1588 aa34.91■■■■□ 3.18
MED17-220ENST00000639596 CC2D2AQ9P2K1 1620 aa34.88■■■■□ 3.17
MED17-220ENST00000639596 ATAD2BQ9ULI0 1458 aa34.87■■■■□ 3.17
MED17-220ENST00000639596 SMARCA2P51531 1590 aa34.8■■■■□ 3.16
MED17-220ENST00000639596 NCAPD3P42695 1498 aa34.66■■■■□ 3.14
MED17-220ENST00000639596 TOP2AP11388 1531 aaKnown RBP34.61■■■■□ 3.13
MED17-220ENST00000639596 BAZ1BQ9UIG0 1483 aaKnown RBP34.6■■■■□ 3.13
MED17-220ENST00000639596 DNAJC5BQ9UF47 199 aa34.6■■■■□ 3.13
MED17-220ENST00000639596 HMGXB3Q12766 1538 aa34.57■■■■□ 3.12
MED17-220ENST00000639596 CCDC88BA6NC98 1476 aa34.25■■■■□ 3.07
MED17-220ENST00000639596 CFTRP13569 1480 aa33.73■■■□□ 2.99
MED17-220ENST00000639596 CADPSQ9ULU8 1353 aa33.72■■■□□ 2.99
MED17-220ENST00000639596 NESP48681 1621 aa33.67■■■□□ 2.98
MED17-220ENST00000639596 LAMC3Q9Y6N6 1575 aa33.58■■■□□ 2.97
MED17-220ENST00000639596 PRDM2Q13029 1718 aa33.53■■■□□ 2.96
MED17-220ENST00000639596 ABCC8Q09428 1581 aa33.35■■■□□ 2.93
MED17-220ENST00000639596 FANCD2Q9BXW9 1451 aa33.35■■■□□ 2.93
MED17-220ENST00000639596 CHIC1Q5VXU3 224 aa33.3■■■□□ 2.92
MED17-220ENST00000639596 PDS5BQ9NTI5 1447 aa33.29■■■□□ 2.92
MED17-220ENST00000639596 KIF21AQ7Z4S6 1674 aa33.26■■■□□ 2.92
MED17-220ENST00000639596 CEP164Q9UPV0 1460 aa33.19■■■□□ 2.9
MED17-220ENST00000639596 WRNQ14191 1432 aaPredicted RBP eCLIP33.16■■■□□ 2.9
MED17-220ENST00000639596 SYNJ1O43426 1573 aa33.11■■■□□ 2.89
MED17-220ENST00000639596 CUX1P39880 1505 aa33.08■■■□□ 2.89
MED17-220ENST00000639596 ERCC6Q03468 1493 aa33.05■■■□□ 2.88
MED17-220ENST00000639596 TRIM41Q8WV44 630 aa33.02■■■□□ 2.88
MED17-220ENST00000639596 URB2Q14146 1524 aaKnown RBP33■■■□□ 2.87
MED17-220ENST00000639596 TOP2BQ02880 1626 aa32.99■■■□□ 2.87
MED17-220ENST00000639596 BIVM-ERCC5R4GMW8 1640 aa32.98■■■□□ 2.87
MED17-220ENST00000639596 DNMBPQ6XZF7 1577 aa32.94■■■□□ 2.86
MED17-220ENST00000639596 MRC2Q9UBG0 1479 aa32.94■■■□□ 2.86
MED17-220ENST00000639596 TOPBP1Q92547 1522 aa32.94■■■□□ 2.86
MED17-220ENST00000639596 THOC2Q8NI27 1593 aaKnown RBP32.9■■■□□ 2.86
MED17-220ENST00000639596 WDR62O43379 1518 aa32.83■■■□□ 2.85
MED17-220ENST00000639596 FGD5Q6ZNL6 1462 aa32.79■■■□□ 2.84
MED17-220ENST00000639596 POLA1P09884 1462 aaPredicted RBP32.74■■■□□ 2.83
MED17-220ENST00000639596 RAD54L2Q9Y4B4 1467 aa32.62■■■□□ 2.81
MED17-220ENST00000639596 CUX2O14529 1486 aa32.6■■■□□ 2.81
MED17-220ENST00000639596 SOGA1O94964 1423 aa32.58■■■□□ 2.81
MED17-220ENST00000639596 RUSC2Q8N2Y8 1516 aa32.52■■■□□ 2.8
MED17-220ENST00000639596 TARBP1Q13395 1621 aaKnown RBP32.52■■■□□ 2.8
MED17-220ENST00000639596 ABCA10Q8WWZ4 1543 aa32.48■■■□□ 2.79
MED17-220ENST00000639596 WDR97A6NE52 1622 aa32.48■■■□□ 2.79
MED17-220ENST00000639596 IFT140Q96RY7 1462 aa32.43■■■□□ 2.78
MED17-220ENST00000639596 FAM9AQ8IZU1 332 aaPredicted RBP32.42■■■□□ 2.78
MED17-220ENST00000639596 KIF27Q86VH2 1401 aa32.36■■■□□ 2.77
MED17-220ENST00000639596 TDRD9Q8NDG6 1382 aaKnown RBP32.34■■■□□ 2.77
MED17-220ENST00000639596 ZNF608Q9ULD9 1512 aaPredicted RBP32.34■■■□□ 2.77
MED17-220ENST00000639596 ABCA5Q8WWZ7 1642 aa32.3■■■□□ 2.76
MED17-220ENST00000639596 EEA1Q15075 1411 aa32.3■■■□□ 2.76
MED17-220ENST00000639596 AQRO60306 1485 aaKnown RBP eCLIP32.25■■■□□ 2.754e-7■■■□□ 16.8
MED17-220ENST00000639596 GAPVD1Q14C86 1478 aa32.22■■■□□ 2.75
MED17-220ENST00000639596 EIF4G3O43432 1585 aaKnown RBP32.2■■■□□ 2.75
MED17-220ENST00000639596 CSRNP3Q8WYN3 585 aa32.2■■■□□ 2.75
MED17-220ENST00000639596 IGF1RP08069 1367 aa32.17■■■□□ 2.74
MED17-220ENST00000639596 PBRM1Q86U86 1689 aa32.11■■■□□ 2.73
MED17-220ENST00000639596 ERICH3Q5RHP9 1530 aa32.08■■■□□ 2.73
MED17-220ENST00000639596 GRIN2BQ13224 1484 aa32.05■■■□□ 2.72
MED17-220ENST00000639596 PRXQ9BXM0 1461 aa32.03■■■□□ 2.72
MED17-220ENST00000639596 LOC105371045A0A1W2PR82 267 aa32■■■□□ 2.71
MED17-220ENST00000639596 EHMT2Q96KQ7 1210 aa31.99■■■□□ 2.71
MED17-220ENST00000639596 KIF21BO75037 1637 aa31.98■■■□□ 2.71
MED17-220ENST00000639596 CARMIL1Q5VZK9 1371 aa31.97■■■□□ 2.71
MED17-220ENST00000639596 CUL7Q14999 1698 aa31.97■■■□□ 2.71
MED17-220ENST00000639596 RAPGEF2Q9Y4G8 1499 aa31.95■■■□□ 2.7
MED17-220ENST00000639596 SNAPC4Q5SXM2 1469 aa31.94■■■□□ 2.7
MED17-220ENST00000639596 ADAMTS12P58397 1594 aa31.92■■■□□ 2.7
MED17-220ENST00000639596 GOLGA3Q08378 1498 aa31.86■■■□□ 2.69
MED17-220ENST00000639596 MAGI1Q96QZ7 1491 aaPredicted RBP31.86■■■□□ 2.69
MED17-220ENST00000639596 FHAD1B1AJZ9 1412 aa31.85■■■□□ 2.69
MED17-220ENST00000639596 SYNJ2O15056 1496 aa31.75■■■□□ 2.67
MED17-220ENST00000639596 UBTFP17480 764 aaKnown RBP31.7■■■□□ 2.67
MED17-220ENST00000639596 GRIN2AQ12879 1464 aa31.68■■■□□ 2.66
MED17-220ENST00000639596 CHMP7Q8WUX9 453 aaPredicted RBP31.64■■■□□ 2.66
MED17-220ENST00000639596 FBLN2P98095 1184 aa31.64■■■□□ 2.66
MED17-220ENST00000639596 TNIKQ9UKE5 1360 aa31.63■■■□□ 2.65
MED17-220ENST00000639596 CHD1O14646 1710 aa31.62■■■□□ 2.65
MED17-220ENST00000639596 CTTNBP2Q8WZ74 1663 aa31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms