RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 NISCHQ9Y2I1 1504 aa31.77■■■□□ 2.68
ATRIP-208ENST00000639561 CCDC180Q9P1Z9 1646 aa28.49■■■□□ 2.15
ATRIP-208ENST00000639561 ABCC9O60706 1549 aa28.06■■■□□ 2.08
ATRIP-208ENST00000639561 RB1CC1Q8TDY2 1594 aa26.94■■□□□ 1.9
ATRIP-208ENST00000639561 NACADO15069 1562 aa26.82■■□□□ 1.88
ATRIP-208ENST00000639561 DCAF8L2P0C7V8 631 aa26.58■■□□□ 1.85
ATRIP-208ENST00000639561 MYO15BQ96JP2 1530 aa26.57■■□□□ 1.84
ATRIP-208ENST00000639561 ZCCHC6Q5VYS8 1495 aaKnown RBP26.41■■□□□ 1.82
ATRIP-208ENST00000639561 DCAF1Q9Y4B6 1507 aa26.32■■□□□ 1.8
ATRIP-208ENST00000639561 UNC13AQ9UPW8 1703 aa26.32■■□□□ 1.8
ATRIP-208ENST00000639561 PABPN1Q86U42 306 aaKnown RBP eCLIP26.1■■□□□ 1.77
ATRIP-208ENST00000639561 BICRAQ9NZM4 1560 aa26.08■■□□□ 1.76
ATRIP-208ENST00000639561 DNAJC5BQ9UF47 199 aa25.95■■□□□ 1.74
ATRIP-208ENST00000639561 SCRIBQ14160 1630 aa25.88■■□□□ 1.73
ATRIP-208ENST00000639561 SHROOM4Q9ULL8 1493 aa25.88■■□□□ 1.73
ATRIP-208ENST00000639561 EIF4G1Q04637 1599 aaKnown RBP25.43■■□□□ 1.66
ATRIP-208ENST00000639561 CC2D2AQ9P2K1 1620 aa25.41■■□□□ 1.66
ATRIP-208ENST00000639561 CECR2Q9BXF3 1484 aa25.27■■□□□ 1.64
ATRIP-208ENST00000639561 SMARCA4P51532 1647 aa24.75■■□□□ 1.55
ATRIP-208ENST00000639561 NCAPD3P42695 1498 aa24.71■■□□□ 1.55
ATRIP-208ENST00000639561 BAZ1AQ9NRL2 1556 aaPredicted RBP24.69■■□□□ 1.54
ATRIP-208ENST00000639561 SMARCA2P51531 1590 aa24.68■■□□□ 1.54
ATRIP-208ENST00000639561 ATAD2BQ9ULI0 1458 aa24.66■■□□□ 1.54
ATRIP-208ENST00000639561 HMGXB3Q12766 1538 aa24.61■■□□□ 1.53
ATRIP-208ENST00000639561 PEG3Q9GZU2 1588 aa24.53■■□□□ 1.52
ATRIP-208ENST00000639561 BAZ1BQ9UIG0 1483 aaKnown RBP24.47■■□□□ 1.51
ATRIP-208ENST00000639561 MROH2BQ7Z745 1585 aa24.45■■□□□ 1.5
ATRIP-208ENST00000639561 SUPT5HO00267 1087 aaKnown RBP24.36■■□□□ 1.49
ATRIP-208ENST00000639561 ERCC6Q03468 1493 aa24.26■■□□□ 1.47
ATRIP-208ENST00000639561 WIZO95785 1651 aa24.2■■□□□ 1.46
ATRIP-208ENST00000639561 NESP48681 1621 aa24.17■■□□□ 1.46
ATRIP-208ENST00000639561 LAMC3Q9Y6N6 1575 aa24.16■■□□□ 1.46
ATRIP-208ENST00000639561 CUX2O14529 1486 aa24.14■■□□□ 1.46
ATRIP-208ENST00000639561 RSF1Q96T23 1441 aaPredicted RBP24.05■■□□□ 1.44
ATRIP-208ENST00000639561 PDS5BQ9NTI5 1447 aa23.98■■□□□ 1.43
ATRIP-208ENST00000639561 TOP2AP11388 1531 aaKnown RBP23.95■■□□□ 1.43
ATRIP-208ENST00000639561 CADPSQ9ULU8 1353 aa23.95■■□□□ 1.43
ATRIP-208ENST00000639561 KIF21AQ7Z4S6 1674 aa23.95■■□□□ 1.42
ATRIP-208ENST00000639561 THOC2Q8NI27 1593 aaKnown RBP23.95■■□□□ 1.42
ATRIP-208ENST00000639561 CFTRP13569 1480 aa23.75■■□□□ 1.39
ATRIP-208ENST00000639561 MRC2Q9UBG0 1479 aa23.75■■□□□ 1.39
ATRIP-208ENST00000639561 CEP164Q9UPV0 1460 aa23.72■■□□□ 1.39
ATRIP-208ENST00000639561 FANCD2Q9BXW9 1451 aa23.69■■□□□ 1.38
ATRIP-208ENST00000639561 WDR62O43379 1518 aa23.69■■□□□ 1.38
ATRIP-208ENST00000639561 DNAJC5Q9H3Z4 198 aa23.69■■□□□ 1.38
ATRIP-208ENST00000639561 PRDM2Q13029 1718 aa23.67■■□□□ 1.38
ATRIP-208ENST00000639561 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
ATRIP-208ENST00000639561 CHIC1Q5VXU3 224 aa23.52■■□□□ 1.36
ATRIP-208ENST00000639561 URB2Q14146 1524 aaKnown RBP23.47■■□□□ 1.35
ATRIP-208ENST00000639561 ABCC8Q09428 1581 aa23.32■■□□□ 1.32
ATRIP-208ENST00000639561 TOPBP1Q92547 1522 aa23.29■■□□□ 1.32
ATRIP-208ENST00000639561 DNMBPQ6XZF7 1577 aa23.26■■□□□ 1.31
ATRIP-208ENST00000639561 IFT140Q96RY7 1462 aa23.24■■□□□ 1.31
ATRIP-208ENST00000639561 ZNF608Q9ULD9 1512 aaPredicted RBP23.1■■□□□ 1.29
ATRIP-208ENST00000639561 TARBP1Q13395 1621 aaKnown RBP23.07■■□□□ 1.28
ATRIP-208ENST00000639561 EIF4G3O43432 1585 aaKnown RBP23.06■■□□□ 1.28
ATRIP-208ENST00000639561 POLA1P09884 1462 aaPredicted RBP23.05■■□□□ 1.28
ATRIP-208ENST00000639561 OSCARQ8IYS5 282 aa23.01■■□□□ 1.27
ATRIP-208ENST00000639561 CUX1P39880 1505 aa22.98■■□□□ 1.27
ATRIP-208ENST00000639561 FGD5Q6ZNL6 1462 aa22.96■■□□□ 1.27
ATRIP-208ENST00000639561 WDR97A6NE52 1622 aa22.95■■□□□ 1.26
ATRIP-208ENST00000639561 SOGA1O94964 1423 aa22.95■■□□□ 1.26
ATRIP-208ENST00000639561 RAD54L2Q9Y4B4 1467 aa22.92■■□□□ 1.26
ATRIP-208ENST00000639561 AQRO60306 1485 aaKnown RBP eCLIP22.92■■□□□ 1.26
ATRIP-208ENST00000639561 CHD1O14646 1710 aa22.85■■□□□ 1.25
ATRIP-208ENST00000639561 TDRD9Q8NDG6 1382 aaKnown RBP22.82■■□□□ 1.24
ATRIP-208ENST00000639561 TRIM41Q8WV44 630 aa22.79■■□□□ 1.24
ATRIP-208ENST00000639561 BIVM-ERCC5R4GMW8 1640 aa22.75■■□□□ 1.23
ATRIP-208ENST00000639561 GRIN2BQ13224 1484 aa22.75■■□□□ 1.23
ATRIP-208ENST00000639561 SNAPC4Q5SXM2 1469 aa22.74■■□□□ 1.23
ATRIP-208ENST00000639561 MAGI1Q96QZ7 1491 aaPredicted RBP22.74■■□□□ 1.23
ATRIP-208ENST00000639561 ABCA10Q8WWZ4 1543 aa22.73■■□□□ 1.23
ATRIP-208ENST00000639561 RIMBP3CA6NJZ7 1639 aa22.73■■□□□ 1.23
ATRIP-208ENST00000639561 RIMBP3BA6NNM3 1639 aa22.73■■□□□ 1.23
ATRIP-208ENST00000639561 TOP2BQ02880 1626 aa22.73■■□□□ 1.23
ATRIP-208ENST00000639561 RIMBP3Q9UFD9 1639 aa22.73■■□□□ 1.23
ATRIP-208ENST00000639561 PBRM1Q86U86 1689 aa22.73■■□□□ 1.23
ATRIP-208ENST00000639561 LOC105371045A0A1W2PR82 267 aa22.72■■□□□ 1.23
ATRIP-208ENST00000639561 WRNQ14191 1432 aaPredicted RBP eCLIP22.71■■□□□ 1.23
ATRIP-208ENST00000639561 FBLN2P98095 1184 aa22.7■■□□□ 1.22
ATRIP-208ENST00000639561 ABCA5Q8WWZ7 1642 aa22.7■■□□□ 1.22
ATRIP-208ENST00000639561 GAPVD1Q14C86 1478 aa22.69■■□□□ 1.22
ATRIP-208ENST00000639561 SYNJ1O43426 1573 aa22.68■■□□□ 1.22
ATRIP-208ENST00000639561 ARHGEF11O15085 1522 aa22.68■■□□□ 1.22
ATRIP-208ENST00000639561 SYNJ2O15056 1496 aa22.64■■□□□ 1.22
ATRIP-208ENST00000639561 CHMP7Q8WUX9 453 aaPredicted RBP22.62■■□□□ 1.21
ATRIP-208ENST00000639561 CLASP1Q7Z460 1538 aa22.58■■□□□ 1.2
ATRIP-208ENST00000639561 ADAMTS12P58397 1594 aa22.5■■□□□ 1.19
ATRIP-208ENST00000639561 FAM9AQ8IZU1 332 aaPredicted RBP22.5■■□□□ 1.19
ATRIP-208ENST00000639561 ERICH3Q5RHP9 1530 aa22.48■■□□□ 1.19
ATRIP-208ENST00000639561 ARAP1Q96P48 1450 aa22.46■■□□□ 1.19
ATRIP-208ENST00000639561 GRIN2AQ12879 1464 aa22.45■■□□□ 1.18
ATRIP-208ENST00000639561 FHAD1B1AJZ9 1412 aa22.43■■□□□ 1.18
ATRIP-208ENST00000639561 CYB5RLQ6IPT4 315 aa22.42■■□□□ 1.18
ATRIP-208ENST00000639561 NUP160Q12769 1436 aa22.36■■□□□ 1.17
ATRIP-208ENST00000639561 CEP170Q5SW79 1584 aa22.35■■□□□ 1.17
ATRIP-208ENST00000639561 KIF27Q86VH2 1401 aa22.28■■□□□ 1.16
ATRIP-208ENST00000639561 SHROOM2Q13796 1616 aa22.26■■□□□ 1.15
ATRIP-208ENST00000639561 CUL7Q14999 1698 aa22.25■■□□□ 1.15
ATRIP-208ENST00000639561 EHMT2Q96KQ7 1210 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms