RNA–Protein interactions for RNA: ENST00000639386.1

PAX6-255, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-255ENST00000639386 NISCHQ9Y2I1 1504 aa30.68■■■□□ 2.5
PAX6-255ENST00000639386 CCDC180Q9P1Z9 1646 aa27.31■■□□□ 1.96
PAX6-255ENST00000639386 ABCC9O60706 1549 aa26.62■■□□□ 1.85
PAX6-255ENST00000639386 RB1CC1Q8TDY2 1594 aa25.65■■□□□ 1.7
PAX6-255ENST00000639386 NACADO15069 1562 aa25.63■■□□□ 1.69
PAX6-255ENST00000639386 DCAF8L2P0C7V8 631 aa25.56■■□□□ 1.68
PAX6-255ENST00000639386 ZCCHC6Q5VYS8 1495 aaKnown RBP25.56■■□□□ 1.68
PAX6-255ENST00000639386 MYO15BQ96JP2 1530 aa25.48■■□□□ 1.67
PAX6-255ENST00000639386 DCAF1Q9Y4B6 1507 aa25.39■■□□□ 1.66
PAX6-255ENST00000639386 UNC13AQ9UPW8 1703 aa25.19■■□□□ 1.62
PAX6-255ENST00000639386 BICRAQ9NZM4 1560 aa24.9■■□□□ 1.58
PAX6-255ENST00000639386 SCRIBQ14160 1630 aa24.88■■□□□ 1.57
PAX6-255ENST00000639386 PABPN1Q86U42 306 aaKnown RBP eCLIP24.86■■□□□ 1.57
PAX6-255ENST00000639386 SHROOM4Q9ULL8 1493 aa24.59■■□□□ 1.53
PAX6-255ENST00000639386 DNAJC5BQ9UF47 199 aa24.41■■□□□ 1.5
PAX6-255ENST00000639386 EIF4G1Q04637 1599 aaKnown RBP24.22■■□□□ 1.47
PAX6-255ENST00000639386 CC2D2AQ9P2K1 1620 aa24.12■■□□□ 1.45
PAX6-255ENST00000639386 CECR2Q9BXF3 1484 aa23.9■■□□□ 1.42
PAX6-255ENST00000639386 SMARCA4P51532 1647 aa23.82■■□□□ 1.4
PAX6-255ENST00000639386 BAZ1AQ9NRL2 1556 aaPredicted RBP23.77■■□□□ 1.4
PAX6-255ENST00000639386 MROH2BQ7Z745 1585 aa23.65■■□□□ 1.38
PAX6-255ENST00000639386 ATAD2BQ9ULI0 1458 aa23.65■■□□□ 1.38
PAX6-255ENST00000639386 SMARCA2P51531 1590 aa23.63■■□□□ 1.37
PAX6-255ENST00000639386 NCAPD3P42695 1498 aa23.63■■□□□ 1.37
PAX6-255ENST00000639386 PEG3Q9GZU2 1588 aa23.59■■□□□ 1.37
PAX6-255ENST00000639386 HMGXB3Q12766 1538 aa23.53■■□□□ 1.36
PAX6-255ENST00000639386 BAZ1BQ9UIG0 1483 aaKnown RBP23.45■■□□□ 1.34
PAX6-255ENST00000639386 WIZO95785 1651 aa23.43■■□□□ 1.34
PAX6-255ENST00000639386 RSF1Q96T23 1441 aaPredicted RBP23.36■■□□□ 1.33
PAX6-255ENST00000639386 TOP2AP11388 1531 aaKnown RBP23.14■■□□□ 1.3
PAX6-255ENST00000639386 NESP48681 1621 aa23.06■■□□□ 1.28
PAX6-255ENST00000639386 LAMC3Q9Y6N6 1575 aa23.02■■□□□ 1.28
PAX6-255ENST00000639386 CADPSQ9ULU8 1353 aa22.93■■□□□ 1.26
PAX6-255ENST00000639386 ERCC6Q03468 1493 aa22.92■■□□□ 1.26
PAX6-255ENST00000639386 CCDC88BA6NC98 1476 aa22.87■■□□□ 1.25
PAX6-255ENST00000639386 KIF21AQ7Z4S6 1674 aa22.86■■□□□ 1.25
PAX6-255ENST00000639386 PDS5BQ9NTI5 1447 aa22.82■■□□□ 1.24
PAX6-255ENST00000639386 CFTRP13569 1480 aa22.82■■□□□ 1.24
PAX6-255ENST00000639386 SUPT5HO00267 1087 aaKnown RBP22.77■■□□□ 1.24
PAX6-255ENST00000639386 PRDM2Q13029 1718 aa22.77■■□□□ 1.24
PAX6-255ENST00000639386 THOC2Q8NI27 1593 aaKnown RBP22.74■■□□□ 1.23
PAX6-255ENST00000639386 CUX2O14529 1486 aa22.68■■□□□ 1.22
PAX6-255ENST00000639386 FANCD2Q9BXW9 1451 aa22.67■■□□□ 1.22
PAX6-255ENST00000639386 CEP164Q9UPV0 1460 aa22.64■■□□□ 1.21
PAX6-255ENST00000639386 MRC2Q9UBG0 1479 aa22.6■■□□□ 1.21
PAX6-255ENST00000639386 WDR62O43379 1518 aa22.54■■□□□ 1.2
PAX6-255ENST00000639386 URB2Q14146 1524 aaKnown RBP22.46■■□□□ 1.19
PAX6-255ENST00000639386 TOPBP1Q92547 1522 aa22.33■■□□□ 1.16
PAX6-255ENST00000639386 ABCC8Q09428 1581 aa22.32■■□□□ 1.16
PAX6-255ENST00000639386 DNMBPQ6XZF7 1577 aa22.32■■□□□ 1.16
PAX6-255ENST00000639386 CUX1P39880 1505 aa22.18■■□□□ 1.14
PAX6-255ENST00000639386 IFT140Q96RY7 1462 aa22.16■■□□□ 1.14
PAX6-255ENST00000639386 POLA1P09884 1462 aaPredicted RBP22.14■■□□□ 1.13
PAX6-255ENST00000639386 TARBP1Q13395 1621 aaKnown RBP22.12■■□□□ 1.13
PAX6-255ENST00000639386 FGD5Q6ZNL6 1462 aa22.09■■□□□ 1.13
PAX6-255ENST00000639386 ZNF608Q9ULD9 1512 aaPredicted RBP22.07■■□□□ 1.12
PAX6-255ENST00000639386 BIVM-ERCC5R4GMW8 1640 aa22.04■■□□□ 1.12
PAX6-255ENST00000639386 RAD54L2Q9Y4B4 1467 aa22.04■■□□□ 1.12
PAX6-255ENST00000639386 SOGA1O94964 1423 aa22.03■■□□□ 1.12
PAX6-255ENST00000639386 WRNQ14191 1432 aaPredicted RBP eCLIP22.02■■□□□ 1.12
PAX6-255ENST00000639386 TOP2BQ02880 1626 aa22.02■■□□□ 1.12
PAX6-255ENST00000639386 SYNJ1O43426 1573 aa22.01■■□□□ 1.11
PAX6-255ENST00000639386 EIF4G3O43432 1585 aaKnown RBP22.01■■□□□ 1.11
PAX6-255ENST00000639386 WDR97A6NE52 1622 aa21.98■■□□□ 1.11
PAX6-255ENST00000639386 AQRO60306 1485 aaKnown RBP eCLIP21.95■■□□□ 1.1
PAX6-255ENST00000639386 DNAJC5Q9H3Z4 198 aa21.93■■□□□ 1.1
PAX6-255ENST00000639386 TDRD9Q8NDG6 1382 aaKnown RBP21.89■■□□□ 1.09
PAX6-255ENST00000639386 ABCA10Q8WWZ4 1543 aa21.88■■□□□ 1.09
PAX6-255ENST00000639386 ABCA5Q8WWZ7 1642 aa21.82■■□□□ 1.08
PAX6-255ENST00000639386 PBRM1Q86U86 1689 aa21.82■■□□□ 1.08
PAX6-255ENST00000639386 GAPVD1Q14C86 1478 aa21.79■■□□□ 1.08
PAX6-255ENST00000639386 CHD1O14646 1710 aa21.78■■□□□ 1.08
PAX6-255ENST00000639386 GRIN2BQ13224 1484 aa21.77■■□□□ 1.08
PAX6-255ENST00000639386 SNAPC4Q5SXM2 1469 aa21.74■■□□□ 1.07
PAX6-255ENST00000639386 OSCARQ8IYS5 282 aa21.73■■□□□ 1.07
PAX6-255ENST00000639386 MAGI1Q96QZ7 1491 aaPredicted RBP21.72■■□□□ 1.07
PAX6-255ENST00000639386 FBLN2P98095 1184 aa21.63■■□□□ 1.05
PAX6-255ENST00000639386 SYNJ2O15056 1496 aa21.63■■□□□ 1.05
PAX6-255ENST00000639386 ERICH3Q5RHP9 1530 aa21.62■■□□□ 1.05
PAX6-255ENST00000639386 CHMP7Q8WUX9 453 aaPredicted RBP21.59■■□□□ 1.05
PAX6-255ENST00000639386 ADAMTS12P58397 1594 aa21.59■■□□□ 1.05
PAX6-255ENST00000639386 KIF27Q86VH2 1401 aa21.55■■□□□ 1.04
PAX6-255ENST00000639386 FHAD1B1AJZ9 1412 aa21.53■■□□□ 1.04
PAX6-255ENST00000639386 TRIM41Q8WV44 630 aa21.51■■□□□ 1.03
PAX6-255ENST00000639386 GRIN2AQ12879 1464 aa21.5■■□□□ 1.03
PAX6-255ENST00000639386 CLASP1Q7Z460 1538 aa21.49■■□□□ 1.03
PAX6-255ENST00000639386 IGF1RP08069 1367 aa21.47■■□□□ 1.03
PAX6-255ENST00000639386 CUL7Q14999 1698 aa21.46■■□□□ 1.03
PAX6-255ENST00000639386 RIMBP3CA6NJZ7 1639 aa21.44■■□□□ 1.02
PAX6-255ENST00000639386 RIMBP3BA6NNM3 1639 aa21.44■■□□□ 1.02
PAX6-255ENST00000639386 RIMBP3Q9UFD9 1639 aa21.44■■□□□ 1.02
PAX6-255ENST00000639386 CEP170Q5SW79 1584 aa21.41■■□□□ 1.02
PAX6-255ENST00000639386 ARHGEF11O15085 1522 aa21.41■■□□□ 1.02
PAX6-255ENST00000639386 RUSC2Q8N2Y8 1516 aa21.41■■□□□ 1.02
PAX6-255ENST00000639386 NUP160Q12769 1436 aa21.4■■□□□ 1.02
PAX6-255ENST00000639386 CARMIL1Q5VZK9 1371 aa21.34■■□□□ 1.01
PAX6-255ENST00000639386 CHIC1Q5VXU3 224 aa21.3■■□□□ 1
PAX6-255ENST00000639386 SHROOM2Q13796 1616 aa21.28■■□□□ 1
PAX6-255ENST00000639386 ARAP1Q96P48 1450 aa21.23■□□□□ 0.99
PAX6-255ENST00000639386 RAPGEF2Q9Y4G8 1499 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms