RNA–Protein interactions for RNA: ENST00000639070.1

GABRD-208, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 5

Gene GABRD, Length 2,171 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-208ENST00000639070 NISCHQ9Y2I1 1504 aa35.92■■■■□ 3.34
GABRD-208ENST00000639070 CCDC180Q9P1Z9 1646 aa31.08■■■□□ 2.57
GABRD-208ENST00000639070 ZCCHC6Q5VYS8 1495 aaKnown RBP30.26■■■□□ 2.43
GABRD-208ENST00000639070 SHROOM4Q9ULL8 1493 aa29.67■■■□□ 2.34
GABRD-208ENST00000639070 DCAF1Q9Y4B6 1507 aa29.64■■■□□ 2.33
GABRD-208ENST00000639070 DCAF8L2P0C7V8 631 aa29.59■■■□□ 2.33
GABRD-208ENST00000639070 ABCC9O60706 1549 aa29.14■■■□□ 2.26
GABRD-208ENST00000639070 MYO15BQ96JP2 1530 aa29.12■■■□□ 2.25
GABRD-208ENST00000639070 NACADO15069 1562 aa28.86■■■□□ 2.21
GABRD-208ENST00000639070 SCRIBQ14160 1630 aa28.74■■■□□ 2.19
GABRD-208ENST00000639070 SUPT5HO00267 1087 aaKnown RBP28.71■■■□□ 2.19
GABRD-208ENST00000639070 RB1CC1Q8TDY2 1594 aa28.53■■■□□ 2.16
GABRD-208ENST00000639070 UNC13AQ9UPW8 1703 aa28.06■■■□□ 2.08
GABRD-208ENST00000639070 RSF1Q96T23 1441 aaPredicted RBP28.03■■■□□ 2.08
GABRD-208ENST00000639070 CECR2Q9BXF3 1484 aa27.94■■■□□ 2.06
GABRD-208ENST00000639070 MROH2BQ7Z745 1585 aa27.81■■■□□ 2.04
GABRD-208ENST00000639070 BICRAQ9NZM4 1560 aa27.74■■■□□ 2.03
GABRD-208ENST00000639070 BAZ1AQ9NRL2 1556 aaPredicted RBP27.68■■■□□ 2.02
GABRD-208ENST00000639070 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
GABRD-208ENST00000639070 WIZO95785 1651 aa27.61■■■□□ 2.01
GABRD-208ENST00000639070 PABPN1Q86U42 306 aaKnown RBP eCLIP27.59■■■□□ 2.01
GABRD-208ENST00000639070 SMARCA4P51532 1647 aa27.54■■■□□ 2
GABRD-208ENST00000639070 TOP2AP11388 1531 aaKnown RBP27.27■■□□□ 1.96
GABRD-208ENST00000639070 PEG3Q9GZU2 1588 aa27.15■■□□□ 1.94
GABRD-208ENST00000639070 SMARCA2P51531 1590 aa27.07■■□□□ 1.92
GABRD-208ENST00000639070 CCDC88BA6NC98 1476 aa27.04■■□□□ 1.92
GABRD-208ENST00000639070 EIF4G1Q04637 1599 aaKnown RBP27.03■■□□□ 1.92
GABRD-208ENST00000639070 ATAD2BQ9ULI0 1458 aa26.98■■□□□ 1.91
GABRD-208ENST00000639070 TRIM41Q8WV44 630 aa26.91■■□□□ 1.9
GABRD-208ENST00000639070 BAZ1BQ9UIG0 1483 aaKnown RBP26.84■■□□□ 1.89
GABRD-208ENST00000639070 LOC105371045A0A1W2PR82 267 aa26.68■■□□□ 1.86
GABRD-208ENST00000639070 NCAPD3P42695 1498 aa26.65■■□□□ 1.86
GABRD-208ENST00000639070 HMGXB3Q12766 1538 aa26.65■■□□□ 1.86
GABRD-208ENST00000639070 ABCC8Q09428 1581 aa26.64■■□□□ 1.86
GABRD-208ENST00000639070 FAM9AQ8IZU1 332 aaPredicted RBP26.5■■□□□ 1.83
GABRD-208ENST00000639070 CC2D2AQ9P2K1 1620 aa26.36■■□□□ 1.81
GABRD-208ENST00000639070 WRNQ14191 1432 aaPredicted RBP eCLIP26.36■■□□□ 1.81
GABRD-208ENST00000639070 SYNJ1O43426 1573 aa26.28■■□□□ 1.8
GABRD-208ENST00000639070 SOGA1O94964 1423 aa26.21■■□□□ 1.79
GABRD-208ENST00000639070 CFTRP13569 1480 aa26.19■■□□□ 1.78
GABRD-208ENST00000639070 EHMT2Q96KQ7 1210 aa26.17■■□□□ 1.78
GABRD-208ENST00000639070 EEA1Q15075 1411 aa26.13■■□□□ 1.77
GABRD-208ENST00000639070 RUSC2Q8N2Y8 1516 aa26.12■■□□□ 1.77
GABRD-208ENST00000639070 TOP2BQ02880 1626 aa26.1■■□□□ 1.77
GABRD-208ENST00000639070 PRDM2Q13029 1718 aa26.07■■□□□ 1.76
GABRD-208ENST00000639070 BIVM-ERCC5R4GMW8 1640 aa26.07■■□□□ 1.76
GABRD-208ENST00000639070 CADPSQ9ULU8 1353 aa26.01■■□□□ 1.75
GABRD-208ENST00000639070 CSRNP3Q8WYN3 585 aa26■■□□□ 1.75
GABRD-208ENST00000639070 CUX1P39880 1505 aa25.97■■□□□ 1.75
GABRD-208ENST00000639070 PCGF6Q9BYE7 350 aa25.85■■□□□ 1.73
GABRD-208ENST00000639070 GOLGA3Q08378 1498 aa25.83■■□□□ 1.73
GABRD-208ENST00000639070 TNIKQ9UKE5 1360 aa25.83■■□□□ 1.72
GABRD-208ENST00000639070 KIF21BO75037 1637 aa25.82■■□□□ 1.72
GABRD-208ENST00000639070 CEP164Q9UPV0 1460 aa25.79■■□□□ 1.72
GABRD-208ENST00000639070 CEP162Q5TB80 1403 aa25.75■■□□□ 1.71
GABRD-208ENST00000639070 FANCD2Q9BXW9 1451 aa25.75■■□□□ 1.71
GABRD-208ENST00000639070 NESP48681 1621 aa25.73■■□□□ 1.71
GABRD-208ENST00000639070 UBTFP17480 764 aaKnown RBP25.71■■□□□ 1.71
GABRD-208ENST00000639070 TRIM26Q12899 539 aaPredicted RBP25.69■■□□□ 1.7
GABRD-208ENST00000639070 DNAJC5BQ9UF47 199 aa25.69■■□□□ 1.7
GABRD-208ENST00000639070 LAMC3Q9Y6N6 1575 aa25.68■■□□□ 1.7
GABRD-208ENST00000639070 RAPGEF2Q9Y4G8 1499 aa25.65■■□□□ 1.7
GABRD-208ENST00000639070 KIF27Q86VH2 1401 aa25.63■■□□□ 1.69
GABRD-208ENST00000639070 FGD5Q6ZNL6 1462 aa25.61■■□□□ 1.69
GABRD-208ENST00000639070 PRXQ9BXM0 1461 aa25.59■■□□□ 1.69
GABRD-208ENST00000639070 DNMBPQ6XZF7 1577 aa25.57■■□□□ 1.68
GABRD-208ENST00000639070 ERICH3Q5RHP9 1530 aa25.55■■□□□ 1.68
GABRD-208ENST00000639070 TOPBP1Q92547 1522 aa25.52■■□□□ 1.68
GABRD-208ENST00000639070 CUX2O14529 1486 aa25.51■■□□□ 1.67
GABRD-208ENST00000639070 PDS5BQ9NTI5 1447 aa25.45■■□□□ 1.67
GABRD-208ENST00000639070 CLIP1P30622 1438 aa25.45■■□□□ 1.66
GABRD-208ENST00000639070 POLA1P09884 1462 aaPredicted RBP25.43■■□□□ 1.66
GABRD-208ENST00000639070 URB2Q14146 1524 aaKnown RBP25.43■■□□□ 1.66
GABRD-208ENST00000639070 PPARGC1BQ86YN6 1023 aaKnown RBP25.42■■□□□ 1.66
GABRD-208ENST00000639070 KIF21AQ7Z4S6 1674 aa25.4■■□□□ 1.66
GABRD-208ENST00000639070 IGF1RP08069 1367 aa25.4■■□□□ 1.66
GABRD-208ENST00000639070 HRCP23327 699 aa25.39■■□□□ 1.66
GABRD-208ENST00000639070 RAD54L2Q9Y4B4 1467 aa25.38■■□□□ 1.65
GABRD-208ENST00000639070 ABCA10Q8WWZ4 1543 aa25.37■■□□□ 1.65
GABRD-208ENST00000639070 VPS8Q8N3P4 1428 aa25.28■■□□□ 1.64
GABRD-208ENST00000639070 WDR97A6NE52 1622 aa25.27■■□□□ 1.64
GABRD-208ENST00000639070 CARMIL1Q5VZK9 1371 aa25.26■■□□□ 1.63
GABRD-208ENST00000639070 RANGAP1P46060 587 aaPredicted RBP25.25■■□□□ 1.63
GABRD-208ENST00000639070 AEBP2Q6ZN18 517 aaPredicted RBP25.21■■□□□ 1.63
GABRD-208ENST00000639070 ARAP1Q96P48 1450 aa25.18■■□□□ 1.62
GABRD-208ENST00000639070 ABCA5Q8WWZ7 1642 aa25.15■■□□□ 1.62
GABRD-208ENST00000639070 TTBK1Q5TCY1 1321 aaPredicted RBP25.14■■□□□ 1.62
GABRD-208ENST00000639070 MRC2Q9UBG0 1479 aa25.13■■□□□ 1.61
GABRD-208ENST00000639070 CUL7Q14999 1698 aa25.13■■□□□ 1.61
GABRD-208ENST00000639070 TARBP1Q13395 1621 aaKnown RBP25.11■■□□□ 1.61
GABRD-208ENST00000639070 ARHGAP35Q9NRY4 1499 aa25.1■■□□□ 1.61
GABRD-208ENST00000639070 TDRD9Q8NDG6 1382 aaKnown RBP25.09■■□□□ 1.61
GABRD-208ENST00000639070 GAPVD1Q14C86 1478 aa25.06■■□□□ 1.6
GABRD-208ENST00000639070 WDR62O43379 1518 aa25■■□□□ 1.59
GABRD-208ENST00000639070 APLP2Q06481 763 aa24.98■■□□□ 1.59
GABRD-208ENST00000639070 CTTNBP2Q8WZ74 1663 aa24.94■■□□□ 1.58
GABRD-208ENST00000639070 PBRM1Q86U86 1689 aa24.91■■□□□ 1.58
GABRD-208ENST00000639070 ERCC6Q03468 1493 aa24.9■■□□□ 1.58
GABRD-208ENST00000639070 IFT140Q96RY7 1462 aa24.87■■□□□ 1.57
GABRD-208ENST00000639070 AQRO60306 1485 aaKnown RBP eCLIP24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms