RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-238ENST00000638755 NISCHQ9Y2I1 1504 aa30.26■■■□□ 2.43
PAX6-238ENST00000638755 ABCC9O60706 1549 aa28.27■■■□□ 2.12
PAX6-238ENST00000638755 CCDC180Q9P1Z9 1646 aa27.41■■□□□ 1.98
PAX6-238ENST00000638755 DNAJC5BQ9UF47 199 aa27.19■■□□□ 1.94
PAX6-238ENST00000638755 RB1CC1Q8TDY2 1594 aa26.5■■□□□ 1.83
PAX6-238ENST00000638755 PABPN1Q86U42 306 aaKnown RBP eCLIP26.25■■□□□ 1.79
PAX6-238ENST00000638755 NACADO15069 1562 aa26.12■■□□□ 1.77
PAX6-238ENST00000638755 DCAF8L2P0C7V8 631 aa26.04■■□□□ 1.76
PAX6-238ENST00000638755 UNC13AQ9UPW8 1703 aa25.9■■□□□ 1.74
PAX6-238ENST00000638755 BICRAQ9NZM4 1560 aa25.76■■□□□ 1.71
PAX6-238ENST00000638755 CECR2Q9BXF3 1484 aa25.52■■□□□ 1.68
PAX6-238ENST00000638755 DNAJC5Q9H3Z4 198 aa25.47■■□□□ 1.67
PAX6-238ENST00000638755 MYO15BQ96JP2 1530 aa25.47■■□□□ 1.67
PAX6-238ENST00000638755 CC2D2AQ9P2K1 1620 aa25.45■■□□□ 1.67
PAX6-238ENST00000638755 SHROOM4Q9ULL8 1493 aa25.26■■□□□ 1.63
PAX6-238ENST00000638755 EIF4G1Q04637 1599 aaKnown RBP25.2■■□□□ 1.62
PAX6-238ENST00000638755 SCRIBQ14160 1630 aa25.04■■□□□ 1.6
PAX6-238ENST00000638755 ZCCHC6Q5VYS8 1495 aaKnown RBP24.89■■□□□ 1.58
PAX6-238ENST00000638755 DCAF1Q9Y4B6 1507 aa24.88■■□□□ 1.57
PAX6-238ENST00000638755 CUX2O14529 1486 aa24.58■■□□□ 1.53
PAX6-238ENST00000638755 ERCC6Q03468 1493 aa24.46■■□□□ 1.51
PAX6-238ENST00000638755 TRIM41Q8WV44 630 aa24.15■■□□□ 1.46
PAX6-238ENST00000638755 NCAPD3P42695 1498 aa24.13■■□□□ 1.45
PAX6-238ENST00000638755 NESP48681 1621 aa24.07■■□□□ 1.44
PAX6-238ENST00000638755 ATAD2BQ9ULI0 1458 aa23.98■■□□□ 1.43
PAX6-238ENST00000638755 THOC2Q8NI27 1593 aaKnown RBP23.9■■□□□ 1.42
PAX6-238ENST00000638755 HMGXB3Q12766 1538 aa23.87■■□□□ 1.41
PAX6-238ENST00000638755 SMARCA2P51531 1590 aa23.85■■□□□ 1.41
PAX6-238ENST00000638755 SMARCA4P51532 1647 aa23.76■■□□□ 1.39
PAX6-238ENST00000638755 BAZ1BQ9UIG0 1483 aaKnown RBP23.73■■□□□ 1.39
PAX6-238ENST00000638755 LAMC3Q9Y6N6 1575 aa23.7■■□□□ 1.38
PAX6-238ENST00000638755 KIF21AQ7Z4S6 1674 aa23.69■■□□□ 1.38
PAX6-238ENST00000638755 PDS5BQ9NTI5 1447 aa23.63■■□□□ 1.37
PAX6-238ENST00000638755 BAZ1AQ9NRL2 1556 aaPredicted RBP23.52■■□□□ 1.36
PAX6-238ENST00000638755 PEG3Q9GZU2 1588 aa23.48■■□□□ 1.35
PAX6-238ENST00000638755 MRC2Q9UBG0 1479 aa23.47■■□□□ 1.35
PAX6-238ENST00000638755 OSCARQ8IYS5 282 aa23.42■■□□□ 1.34
PAX6-238ENST00000638755 CADPSQ9ULU8 1353 aa23.4■■□□□ 1.34
PAX6-238ENST00000638755 WDR62O43379 1518 aa23.4■■□□□ 1.34
PAX6-238ENST00000638755 MROH2BQ7Z745 1585 aa23.34■■□□□ 1.33
PAX6-238ENST00000638755 CEP164Q9UPV0 1460 aa23.23■■□□□ 1.31
PAX6-238ENST00000638755 RIMBP3CA6NJZ7 1639 aa23.15■■□□□ 1.3
PAX6-238ENST00000638755 RIMBP3BA6NNM3 1639 aa23.15■■□□□ 1.3
PAX6-238ENST00000638755 RIMBP3Q9UFD9 1639 aa23.15■■□□□ 1.3
PAX6-238ENST00000638755 FANCD2Q9BXW9 1451 aa23.15■■□□□ 1.3
PAX6-238ENST00000638755 WIZO95785 1651 aa23.03■■□□□ 1.28
PAX6-238ENST00000638755 ARHGEF11O15085 1522 aa23.01■■□□□ 1.27
PAX6-238ENST00000638755 URB2Q14146 1524 aaKnown RBP23■■□□□ 1.27
PAX6-238ENST00000638755 TRHP20396 242 aaPredicted RBP22.98■■□□□ 1.27
PAX6-238ENST00000638755 CYB5RLQ6IPT4 315 aa22.96■■□□□ 1.27
PAX6-238ENST00000638755 CFTRP13569 1480 aa22.96■■□□□ 1.27
PAX6-238ENST00000638755 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
PAX6-238ENST00000638755 AEBP2Q6ZN18 517 aaPredicted RBP22.85■■□□□ 1.25
PAX6-238ENST00000638755 IFT140Q96RY7 1462 aa22.79■■□□□ 1.24
PAX6-238ENST00000638755 ARAP1Q96P48 1450 aa22.73■■□□□ 1.23
PAX6-238ENST00000638755 FBLN2P98095 1184 aa22.66■■□□□ 1.22
PAX6-238ENST00000638755 EIF4G3O43432 1585 aaKnown RBP22.66■■□□□ 1.22
PAX6-238ENST00000638755 TOP2AP11388 1531 aaKnown RBP22.65■■□□□ 1.22
PAX6-238ENST00000638755 CHD1O14646 1710 aa22.64■■□□□ 1.21
PAX6-238ENST00000638755 PRDM2Q13029 1718 aa22.62■■□□□ 1.21
PAX6-238ENST00000638755 TOPBP1Q92547 1522 aa22.62■■□□□ 1.21
PAX6-238ENST00000638755 RSF1Q96T23 1441 aaPredicted RBP22.58■■□□□ 1.21
PAX6-238ENST00000638755 AQRO60306 1485 aaKnown RBP eCLIP22.58■■□□□ 1.2
PAX6-238ENST00000638755 ABCC8Q09428 1581 aa22.48■■□□□ 1.19
PAX6-238ENST00000638755 DNMBPQ6XZF7 1577 aa22.45■■□□□ 1.18
PAX6-238ENST00000638755 TARBP1Q13395 1621 aaKnown RBP22.45■■□□□ 1.18
PAX6-238ENST00000638755 CCDC88BA6NC98 1476 aa22.44■■□□□ 1.18
PAX6-238ENST00000638755 TDRD9Q8NDG6 1382 aaKnown RBP22.34■■□□□ 1.17
PAX6-238ENST00000638755 POLA1P09884 1462 aaPredicted RBP22.34■■□□□ 1.17
PAX6-238ENST00000638755 CLASP1Q7Z460 1538 aa22.33■■□□□ 1.17
PAX6-238ENST00000638755 RAD54L2Q9Y4B4 1467 aa22.32■■□□□ 1.16
PAX6-238ENST00000638755 CHMP7Q8WUX9 453 aaPredicted RBP22.31■■□□□ 1.16
PAX6-238ENST00000638755 SNAPC4Q5SXM2 1469 aa22.3■■□□□ 1.16
PAX6-238ENST00000638755 SYNJ1O43426 1573 aa22.27■■□□□ 1.16
PAX6-238ENST00000638755 SOGA1O94964 1423 aa22.25■■□□□ 1.15
PAX6-238ENST00000638755 GAPVD1Q14C86 1478 aa22.2■■□□□ 1.14
PAX6-238ENST00000638755 MAGI1Q96QZ7 1491 aaPredicted RBP22.17■■□□□ 1.14
PAX6-238ENST00000638755 SYNJ2O15056 1496 aa22.12■■□□□ 1.13
PAX6-238ENST00000638755 GRIN2BQ13224 1484 aa22.11■■□□□ 1.13
PAX6-238ENST00000638755 FGD5Q6ZNL6 1462 aa22.11■■□□□ 1.13
PAX6-238ENST00000638755 WDR97A6NE52 1622 aa22.1■■□□□ 1.13
PAX6-238ENST00000638755 ERCC6L2Q5T890 1561 aa21.99■■□□□ 1.11
PAX6-238ENST00000638755 CUX1P39880 1505 aa21.96■■□□□ 1.11
PAX6-238ENST00000638755 PBRM1Q86U86 1689 aa21.96■■□□□ 1.11
PAX6-238ENST00000638755 ILDR1Q86SU0 546 aaPredicted RBP21.92■■□□□ 1.1
PAX6-238ENST00000638755 KIF13AQ9H1H9 1805 aa21.88■■□□□ 1.09
PAX6-238ENST00000638755 CEP170Q5SW79 1584 aa21.86■■□□□ 1.09
PAX6-238ENST00000638755 GRIN2AQ12879 1464 aa21.83■■□□□ 1.09
PAX6-238ENST00000638755 ABCA5Q8WWZ7 1642 aa21.8■■□□□ 1.08
PAX6-238ENST00000638755 KDM4FA0A1W2PPD8 638 aa21.79■■□□□ 1.08
PAX6-238ENST00000638755 FAM69CQ0P6D2 419 aa21.78■■□□□ 1.08
PAX6-238ENST00000638755 ABCA10Q8WWZ4 1543 aa21.78■■□□□ 1.08
PAX6-238ENST00000638755 NUP160Q12769 1436 aa21.76■■□□□ 1.07
PAX6-238ENST00000638755 SHROOM2Q13796 1616 aa21.73■■□□□ 1.07
PAX6-238ENST00000638755 ADAMTS12P58397 1594 aa21.7■■□□□ 1.06
PAX6-238ENST00000638755 PRG4Q92954 1404 aaPredicted RBP21.68■■□□□ 1.06
PAX6-238ENST00000638755 ABCC10Q5T3U5 1492 aa21.68■■□□□ 1.06
PAX6-238ENST00000638755 NPM1P06748 294 aaKnown RBP eCLIP21.66■■□□□ 1.06
PAX6-238ENST00000638755 FHAD1B1AJZ9 1412 aa21.63■■□□□ 1.05
PAX6-238ENST00000638755 KDM6BO15054 1643 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms