RNA–Protein interactions for RNA: ENST00000638611.1

LAMA1-209, Transcript of laminin subunit alpha 1, humanhuman

TSL 5 BASIC

Gene LAMA1, Length 1,310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1-209ENST00000638611 NISCHQ9Y2I1 1504 aa33.64■■■□□ 2.98
LAMA1-209ENST00000638611 CCDC180Q9P1Z9 1646 aa30.05■■■□□ 2.4
LAMA1-209ENST00000638611 ABCC9O60706 1549 aa29.66■■■□□ 2.34
LAMA1-209ENST00000638611 RB1CC1Q8TDY2 1594 aa28.44■■■□□ 2.14
LAMA1-209ENST00000638611 NACADO15069 1562 aa28.34■■■□□ 2.13
LAMA1-209ENST00000638611 DCAF8L2P0C7V8 631 aa28.26■■■□□ 2.11
LAMA1-209ENST00000638611 MYO15BQ96JP2 1530 aa28.08■■■□□ 2.09
LAMA1-209ENST00000638611 ZCCHC6Q5VYS8 1495 aaKnown RBP27.98■■■□□ 2.07
LAMA1-209ENST00000638611 DCAF1Q9Y4B6 1507 aa27.84■■■□□ 2.05
LAMA1-209ENST00000638611 UNC13AQ9UPW8 1703 aa27.68■■■□□ 2.02
LAMA1-209ENST00000638611 PABPN1Q86U42 306 aaKnown RBP eCLIP27.67■■■□□ 2.02
LAMA1-209ENST00000638611 BICRAQ9NZM4 1560 aa27.51■■□□□ 1.99
LAMA1-209ENST00000638611 DNAJC5BQ9UF47 199 aa27.41■■□□□ 1.98
LAMA1-209ENST00000638611 SCRIBQ14160 1630 aa27.38■■□□□ 1.97
LAMA1-209ENST00000638611 SHROOM4Q9ULL8 1493 aa27.31■■□□□ 1.96
LAMA1-209ENST00000638611 EIF4G1Q04637 1599 aaKnown RBP26.86■■□□□ 1.89
LAMA1-209ENST00000638611 CC2D2AQ9P2K1 1620 aa26.81■■□□□ 1.88
LAMA1-209ENST00000638611 CECR2Q9BXF3 1484 aa26.7■■□□□ 1.86
LAMA1-209ENST00000638611 SMARCA4P51532 1647 aa26.17■■□□□ 1.78
LAMA1-209ENST00000638611 NCAPD3P42695 1498 aa26.13■■□□□ 1.77
LAMA1-209ENST00000638611 BAZ1AQ9NRL2 1556 aaPredicted RBP26.13■■□□□ 1.77
LAMA1-209ENST00000638611 ATAD2BQ9ULI0 1458 aa26.1■■□□□ 1.77
LAMA1-209ENST00000638611 SMARCA2P51531 1590 aa26.09■■□□□ 1.77
LAMA1-209ENST00000638611 HMGXB3Q12766 1538 aa25.99■■□□□ 1.75
LAMA1-209ENST00000638611 PEG3Q9GZU2 1588 aa25.92■■□□□ 1.74
LAMA1-209ENST00000638611 MROH2BQ7Z745 1585 aa25.91■■□□□ 1.74
LAMA1-209ENST00000638611 BAZ1BQ9UIG0 1483 aaKnown RBP25.9■■□□□ 1.74
LAMA1-209ENST00000638611 ERCC6Q03468 1493 aa25.64■■□□□ 1.7
LAMA1-209ENST00000638611 WIZO95785 1651 aa25.6■■□□□ 1.69
LAMA1-209ENST00000638611 NESP48681 1621 aa25.56■■□□□ 1.68
LAMA1-209ENST00000638611 RSF1Q96T23 1441 aaPredicted RBP25.53■■□□□ 1.68
LAMA1-209ENST00000638611 LAMC3Q9Y6N6 1575 aa25.5■■□□□ 1.67
LAMA1-209ENST00000638611 CUX2O14529 1486 aa25.46■■□□□ 1.67
LAMA1-209ENST00000638611 CADPSQ9ULU8 1353 aa25.37■■□□□ 1.65
LAMA1-209ENST00000638611 PDS5BQ9NTI5 1447 aa25.36■■□□□ 1.65
LAMA1-209ENST00000638611 TOP2AP11388 1531 aaKnown RBP25.36■■□□□ 1.65
LAMA1-209ENST00000638611 THOC2Q8NI27 1593 aaKnown RBP25.25■■□□□ 1.63
LAMA1-209ENST00000638611 KIF21AQ7Z4S6 1674 aa25.24■■□□□ 1.63
LAMA1-209ENST00000638611 CFTRP13569 1480 aa25.15■■□□□ 1.62
LAMA1-209ENST00000638611 MRC2Q9UBG0 1479 aa25.11■■□□□ 1.61
LAMA1-209ENST00000638611 CEP164Q9UPV0 1460 aa25.1■■□□□ 1.61
LAMA1-209ENST00000638611 FANCD2Q9BXW9 1451 aa25.08■■□□□ 1.61
LAMA1-209ENST00000638611 CCDC88BA6NC98 1476 aa25.04■■□□□ 1.6
LAMA1-209ENST00000638611 WDR62O43379 1518 aa25.02■■□□□ 1.6
LAMA1-209ENST00000638611 DNAJC5Q9H3Z4 198 aa24.96■■□□□ 1.59
LAMA1-209ENST00000638611 PRDM2Q13029 1718 aa24.9■■□□□ 1.58
LAMA1-209ENST00000638611 URB2Q14146 1524 aaKnown RBP24.82■■□□□ 1.56
LAMA1-209ENST00000638611 SUPT5HO00267 1087 aaKnown RBP24.69■■□□□ 1.54
LAMA1-209ENST00000638611 ABCC8Q09428 1581 aa24.66■■□□□ 1.54
LAMA1-209ENST00000638611 TOPBP1Q92547 1522 aa24.63■■□□□ 1.53
LAMA1-209ENST00000638611 DNMBPQ6XZF7 1577 aa24.59■■□□□ 1.53
LAMA1-209ENST00000638611 IFT140Q96RY7 1462 aa24.58■■□□□ 1.53
LAMA1-209ENST00000638611 ZNF608Q9ULD9 1512 aaPredicted RBP24.44■■□□□ 1.5
LAMA1-209ENST00000638611 POLA1P09884 1462 aaPredicted RBP24.4■■□□□ 1.5
LAMA1-209ENST00000638611 TARBP1Q13395 1621 aaKnown RBP24.36■■□□□ 1.49
LAMA1-209ENST00000638611 OSCARQ8IYS5 282 aa24.35■■□□□ 1.49
LAMA1-209ENST00000638611 EIF4G3O43432 1585 aaKnown RBP24.35■■□□□ 1.49
LAMA1-209ENST00000638611 CUX1P39880 1505 aa24.33■■□□□ 1.49
LAMA1-209ENST00000638611 SOGA1O94964 1423 aa24.31■■□□□ 1.48
LAMA1-209ENST00000638611 FGD5Q6ZNL6 1462 aa24.31■■□□□ 1.48
LAMA1-209ENST00000638611 RAD54L2Q9Y4B4 1467 aa24.29■■□□□ 1.48
LAMA1-209ENST00000638611 AQRO60306 1485 aaKnown RBP eCLIP24.28■■□□□ 1.48
LAMA1-209ENST00000638611 WDR97A6NE52 1622 aa24.22■■□□□ 1.47
LAMA1-209ENST00000638611 TDRD9Q8NDG6 1382 aaKnown RBP24.2■■□□□ 1.46
LAMA1-209ENST00000638611 WRNQ14191 1432 aaPredicted RBP eCLIP24.12■■□□□ 1.45
LAMA1-209ENST00000638611 FBLN2P98095 1184 aa24.09■■□□□ 1.45
LAMA1-209ENST00000638611 GRIN2BQ13224 1484 aa24.08■■□□□ 1.45
LAMA1-209ENST00000638611 SNAPC4Q5SXM2 1469 aa24.07■■□□□ 1.44
LAMA1-209ENST00000638611 CHD1O14646 1710 aa24.07■■□□□ 1.44
LAMA1-209ENST00000638611 ABCA10Q8WWZ4 1543 aa24.06■■□□□ 1.44
LAMA1-209ENST00000638611 TOP2BQ02880 1626 aa24.06■■□□□ 1.44
LAMA1-209ENST00000638611 TRIM41Q8WV44 630 aa24.06■■□□□ 1.44
LAMA1-209ENST00000638611 BIVM-ERCC5R4GMW8 1640 aa24.05■■□□□ 1.44
LAMA1-209ENST00000638611 MAGI1Q96QZ7 1491 aaPredicted RBP24.05■■□□□ 1.44
LAMA1-209ENST00000638611 GAPVD1Q14C86 1478 aa24.04■■□□□ 1.44
LAMA1-209ENST00000638611 SYNJ1O43426 1573 aa24.02■■□□□ 1.44
LAMA1-209ENST00000638611 CHMP7Q8WUX9 453 aaPredicted RBP23.99■■□□□ 1.43
LAMA1-209ENST00000638611 ABCA5Q8WWZ7 1642 aa23.98■■□□□ 1.43
LAMA1-209ENST00000638611 PBRM1Q86U86 1689 aa23.97■■□□□ 1.43
LAMA1-209ENST00000638611 SYNJ2O15056 1496 aa23.96■■□□□ 1.43
LAMA1-209ENST00000638611 RIMBP3CA6NJZ7 1639 aa23.94■■□□□ 1.42
LAMA1-209ENST00000638611 RIMBP3BA6NNM3 1639 aa23.94■■□□□ 1.42
LAMA1-209ENST00000638611 RIMBP3Q9UFD9 1639 aa23.94■■□□□ 1.42
LAMA1-209ENST00000638611 ARHGEF11O15085 1522 aa23.93■■□□□ 1.42
LAMA1-209ENST00000638611 CLASP1Q7Z460 1538 aa23.83■■□□□ 1.41
LAMA1-209ENST00000638611 ERICH3Q5RHP9 1530 aa23.79■■□□□ 1.4
LAMA1-209ENST00000638611 ADAMTS12P58397 1594 aa23.78■■□□□ 1.4
LAMA1-209ENST00000638611 FHAD1B1AJZ9 1412 aa23.76■■□□□ 1.39
LAMA1-209ENST00000638611 GRIN2AQ12879 1464 aa23.76■■□□□ 1.39
LAMA1-209ENST00000638611 CYB5RLQ6IPT4 315 aa23.73■■□□□ 1.39
LAMA1-209ENST00000638611 ARAP1Q96P48 1450 aa23.71■■□□□ 1.39
LAMA1-209ENST00000638611 NUP160Q12769 1436 aa23.66■■□□□ 1.38
LAMA1-209ENST00000638611 KIF27Q86VH2 1401 aa23.65■■□□□ 1.38
LAMA1-209ENST00000638611 CEP170Q5SW79 1584 aa23.62■■□□□ 1.37
LAMA1-209ENST00000638611 IGF1RP08069 1367 aa23.53■■□□□ 1.36
LAMA1-209ENST00000638611 CUL7Q14999 1698 aa23.52■■□□□ 1.36
LAMA1-209ENST00000638611 SHROOM2Q13796 1616 aa23.48■■□□□ 1.35
LAMA1-209ENST00000638611 CHIC1Q5VXU3 224 aa23.48■■□□□ 1.35
LAMA1-209ENST00000638611 RUSC2Q8N2Y8 1516 aa23.44■■□□□ 1.34
LAMA1-209ENST00000638611 ERCC6L2Q5T890 1561 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms