RNA–Protein interactions for RNA: ENST00000638578.1

STRADA-228, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 3

Gene STRADA, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-228ENST00000638578 NISCHQ9Y2I1 1504 aa19.41■□□□□ 0.7
STRADA-228ENST00000638578 AEBP2Q6ZN18 517 aaPredicted RBP19.11■□□□□ 0.65
STRADA-228ENST00000638578 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
STRADA-228ENST00000638578 ABCC9O60706 1549 aa17.77■□□□□ 0.44
STRADA-228ENST00000638578 CCDC180Q9P1Z9 1646 aa17.72■□□□□ 0.43
STRADA-228ENST00000638578 RB1CC1Q8TDY2 1594 aa16.93■□□□□ 0.3
STRADA-228ENST00000638578 DNAJC5BQ9UF47 199 aa16.8■□□□□ 0.28
STRADA-228ENST00000638578 NACADO15069 1562 aa16.73■□□□□ 0.27
STRADA-228ENST00000638578 UNC13AQ9UPW8 1703 aa16.64■□□□□ 0.25
STRADA-228ENST00000638578 MYO15BQ96JP2 1530 aa16.41■□□□□ 0.22
STRADA-228ENST00000638578 BICRAQ9NZM4 1560 aa16.39■□□□□ 0.21
STRADA-228ENST00000638578 PABPN1Q86U42 306 aaKnown RBP eCLIP16.39■□□□□ 0.21
STRADA-228ENST00000638578 DCAF8L2P0C7V8 631 aa16.31■□□□□ 0.2
STRADA-228ENST00000638578 PHF23Q9BUL5 403 aaPredicted RBP16.31■□□□□ 0.2
STRADA-228ENST00000638578 SENP3Q9H4L4 574 aaPredicted RBP16.29■□□□□ 0.2
STRADA-228ENST00000638578 SHROOM4Q9ULL8 1493 aa16.24■□□□□ 0.19
STRADA-228ENST00000638578 CC2D2AQ9P2K1 1620 aa16.13■□□□□ 0.17
STRADA-228ENST00000638578 DCAF1Q9Y4B6 1507 aa16.09■□□□□ 0.17
STRADA-228ENST00000638578 CECR2Q9BXF3 1484 aa16.07■□□□□ 0.16
STRADA-228ENST00000638578 ZCCHC6Q5VYS8 1495 aaKnown RBP16.03■□□□□ 0.16
STRADA-228ENST00000638578 EIF4G1Q04637 1599 aaKnown RBP16.03■□□□□ 0.16
STRADA-228ENST00000638578 SCRIBQ14160 1630 aa15.98■□□□□ 0.15
STRADA-228ENST00000638578 DNAJC5Q9H3Z4 198 aa15.73■□□□□ 0.11
STRADA-228ENST00000638578 CUX2O14529 1486 aa15.55■□□□□ 0.08
STRADA-228ENST00000638578 ERCC6Q03468 1493 aa15.42■□□□□ 0.06
STRADA-228ENST00000638578 NCAPD3P42695 1498 aa15.37■□□□□ 0.05
STRADA-228ENST00000638578 HMGXB3Q12766 1538 aa15.32■□□□□ 0.04
STRADA-228ENST00000638578 SMARCA2P51531 1590 aa15.3■□□□□ 0.04
STRADA-228ENST00000638578 ATAD2BQ9ULI0 1458 aa15.27■□□□□ 0.03
STRADA-228ENST00000638578 SMARCA4P51532 1647 aa15.26■□□□□ 0.03
STRADA-228ENST00000638578 THOC2Q8NI27 1593 aaKnown RBP15.22■□□□□ 0.03
STRADA-228ENST00000638578 NESP48681 1621 aa15.17■□□□□ 0.02
STRADA-228ENST00000638578 LAMC3Q9Y6N6 1575 aa15.17■□□□□ 0.02
STRADA-228ENST00000638578 KIF21AQ7Z4S6 1674 aa15.14■□□□□ 0.01
STRADA-228ENST00000638578 PEG3Q9GZU2 1588 aa15.14■□□□□ 0.01
STRADA-228ENST00000638578 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
STRADA-228ENST00000638578 BAZ1BQ9UIG0 1483 aaKnown RBP15.14■□□□□ 0.01
STRADA-228ENST00000638578 FOXD1Q16676 465 aa15.1■□□□□ 0.01
STRADA-228ENST00000638578 PLPPR3Q6T4P5 718 aa15.08■□□□□ 0
STRADA-228ENST00000638578 PDS5BQ9NTI5 1447 aa15□□□□□ -0.01
STRADA-228ENST00000638578 WDR62O43379 1518 aa14.92□□□□□ -0.02
STRADA-228ENST00000638578 MRC2Q9UBG0 1479 aa14.91□□□□□ -0.02
STRADA-228ENST00000638578 MROH2BQ7Z745 1585 aa14.9□□□□□ -0.02
STRADA-228ENST00000638578 TRIM41Q8WV44 630 aa14.88□□□□□ -0.03
STRADA-228ENST00000638578 CADPSQ9ULU8 1353 aa14.85□□□□□ -0.03
STRADA-228ENST00000638578 CEP164Q9UPV0 1460 aa14.8□□□□□ -0.04
STRADA-228ENST00000638578 WIZO95785 1651 aa14.77□□□□□ -0.04
STRADA-228ENST00000638578 PRDM2Q13029 1718 aa14.75□□□□□ -0.05
STRADA-228ENST00000638578 FANCD2Q9BXW9 1451 aa14.72□□□□□ -0.05
STRADA-228ENST00000638578 CFTRP13569 1480 aa14.66□□□□□ -0.06
STRADA-228ENST00000638578 OSCARQ8IYS5 282 aa14.65□□□□□ -0.06
STRADA-228ENST00000638578 RIMBP3CA6NJZ7 1639 aa14.63□□□□□ -0.07
STRADA-228ENST00000638578 RIMBP3BA6NNM3 1639 aa14.63□□□□□ -0.07
STRADA-228ENST00000638578 RIMBP3Q9UFD9 1639 aa14.63□□□□□ -0.07
STRADA-228ENST00000638578 URB2Q14146 1524 aaKnown RBP14.61□□□□□ -0.07
STRADA-228ENST00000638578 TOP2AP11388 1531 aaKnown RBP14.59□□□□□ -0.07
STRADA-228ENST00000638578 ARHGEF11O15085 1522 aa14.51□□□□□ -0.09
STRADA-228ENST00000638578 IFT140Q96RY7 1462 aa14.5□□□□□ -0.09
STRADA-228ENST00000638578 EIF4G3O43432 1585 aaKnown RBP14.47□□□□□ -0.09
STRADA-228ENST00000638578 CHD1O14646 1710 aa14.47□□□□□ -0.09
STRADA-228ENST00000638578 RSF1Q96T23 1441 aaPredicted RBP14.45□□□□□ -0.1
STRADA-228ENST00000638578 ZNF608Q9ULD9 1512 aaPredicted RBP14.44□□□□□ -0.1
STRADA-228ENST00000638578 ABCC8Q09428 1581 aa14.43□□□□□ -0.1
STRADA-228ENST00000638578 PPP6R1Q9UPN7 881 aa14.42□□□□□ -0.1
STRADA-228ENST00000638578 TOPBP1Q92547 1522 aa14.41□□□□□ -0.1
STRADA-228ENST00000638578 ADRA2BP18089 450 aa14.41□□□□□ -0.1
STRADA-228ENST00000638578 DNMBPQ6XZF7 1577 aa14.39□□□□□ -0.11
STRADA-228ENST00000638578 TARBP1Q13395 1621 aaKnown RBP14.37□□□□□ -0.11
STRADA-228ENST00000638578 CCDC88BA6NC98 1476 aa14.33□□□□□ -0.12
STRADA-228ENST00000638578 ARAP1Q96P48 1450 aa14.32□□□□□ -0.12
STRADA-228ENST00000638578 WDR97A6NE52 1622 aa14.3□□□□□ -0.12
STRADA-228ENST00000638578 CYB5RLQ6IPT4 315 aa14.29□□□□□ -0.12
STRADA-228ENST00000638578 TRHP20396 242 aaPredicted RBP14.25□□□□□ -0.13
STRADA-228ENST00000638578 AQRO60306 1485 aaKnown RBP eCLIP14.25□□□□□ -0.133e-6■■□□□ 13.8
STRADA-228ENST00000638578 POLA1P09884 1462 aaPredicted RBP14.24□□□□□ -0.13
STRADA-228ENST00000638578 PIAS4Q8N2W9 510 aaPredicted RBP14.23□□□□□ -0.13
STRADA-228ENST00000638578 CLASP1Q7Z460 1538 aa14.23□□□□□ -0.13
STRADA-228ENST00000638578 SYNJ1O43426 1573 aa14.22□□□□□ -0.13
STRADA-228ENST00000638578 FBLN2P98095 1184 aa14.17□□□□□ -0.14
STRADA-228ENST00000638578 MAGI1Q96QZ7 1491 aaPredicted RBP14.16□□□□□ -0.14
STRADA-228ENST00000638578 PBRM1Q86U86 1689 aa14.16□□□□□ -0.14
STRADA-228ENST00000638578 SNAPC4Q5SXM2 1469 aa14.15□□□□□ -0.14
STRADA-228ENST00000638578 RAD54L2Q9Y4B4 1467 aa14.13□□□□□ -0.15
STRADA-228ENST00000638578 SOGA1O94964 1423 aa14.13□□□□□ -0.15
STRADA-228ENST00000638578 FGD5Q6ZNL6 1462 aa14.11□□□□□ -0.15
STRADA-228ENST00000638578 SYNJ2O15056 1496 aa14.1□□□□□ -0.15
STRADA-228ENST00000638578 GRIN2BQ13224 1484 aa14.09□□□□□ -0.15
STRADA-228ENST00000638578 TDRD9Q8NDG6 1382 aaKnown RBP14.09□□□□□ -0.15
STRADA-228ENST00000638578 CHMP7Q8WUX9 453 aaPredicted RBP14.05□□□□□ -0.16
STRADA-228ENST00000638578 CUX1P39880 1505 aa14.05□□□□□ -0.16
STRADA-228ENST00000638578 GAPVD1Q14C86 1478 aa14.04□□□□□ -0.16
STRADA-228ENST00000638578 ABCA5Q8WWZ7 1642 aa14.02□□□□□ -0.16
STRADA-228ENST00000638578 MSH5O43196 834 aa14.02□□□□□ -0.17
STRADA-228ENST00000638578 KIF13AQ9H1H9 1805 aa13.96□□□□□ -0.17
STRADA-228ENST00000638578 ABCA10Q8WWZ4 1543 aa13.95□□□□□ -0.18
STRADA-228ENST00000638578 SHROOM2Q13796 1616 aa13.93□□□□□ -0.18
STRADA-228ENST00000638578 ADAMTS12P58397 1594 aa13.92□□□□□ -0.18
STRADA-228ENST00000638578 GRIN2AQ12879 1464 aa13.92□□□□□ -0.18
STRADA-228ENST00000638578 CEP170Q5SW79 1584 aa13.92□□□□□ -0.18
STRADA-228ENST00000638578 ERCC6L2Q5T890 1561 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms