RNA–Protein interactions for RNA: ENST00000638465.1

RET-206, Transcript of ret proto-oncogene, humanhuman

TSL 5

Gene RET, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-206ENST00000638465 NISCHQ9Y2I1 1504 aa31.4■■■□□ 2.62
RET-206ENST00000638465 CCDC180Q9P1Z9 1646 aa28.1■■■□□ 2.09
RET-206ENST00000638465 ABCC9O60706 1549 aa27.87■■■□□ 2.05
RET-206ENST00000638465 RB1CC1Q8TDY2 1594 aa26.69■■□□□ 1.86
RET-206ENST00000638465 NACADO15069 1562 aa26.58■■□□□ 1.85
RET-206ENST00000638465 DCAF8L2P0C7V8 631 aa26.36■■□□□ 1.81
RET-206ENST00000638465 MYO15BQ96JP2 1530 aa26.35■■□□□ 1.81
RET-206ENST00000638465 ZCCHC6Q5VYS8 1495 aaKnown RBP26.05■■□□□ 1.76
RET-206ENST00000638465 DCAF1Q9Y4B6 1507 aa26.04■■□□□ 1.76
RET-206ENST00000638465 DNAJC5BQ9UF47 199 aa25.99■■□□□ 1.75
RET-206ENST00000638465 PABPN1Q86U42 306 aaKnown RBP eCLIP25.97■■□□□ 1.75
RET-206ENST00000638465 UNC13AQ9UPW8 1703 aa25.92■■□□□ 1.74
RET-206ENST00000638465 BICRAQ9NZM4 1560 aa25.83■■□□□ 1.73
RET-206ENST00000638465 SHROOM4Q9ULL8 1493 aa25.69■■□□□ 1.7
RET-206ENST00000638465 SCRIBQ14160 1630 aa25.5■■□□□ 1.67
RET-206ENST00000638465 EIF4G1Q04637 1599 aaKnown RBP25.21■■□□□ 1.63
RET-206ENST00000638465 CC2D2AQ9P2K1 1620 aa25.19■■□□□ 1.62
RET-206ENST00000638465 CECR2Q9BXF3 1484 aa25.15■■□□□ 1.62
RET-206ENST00000638465 AEBP2Q6ZN18 517 aaPredicted RBP25.03■■□□□ 1.6
RET-206ENST00000638465 NCAPD3P42695 1498 aa24.56■■□□□ 1.52
RET-206ENST00000638465 ATAD2BQ9ULI0 1458 aa24.45■■□□□ 1.5
RET-206ENST00000638465 SMARCA4P51532 1647 aa24.42■■□□□ 1.5
RET-206ENST00000638465 SMARCA2P51531 1590 aa24.42■■□□□ 1.5
RET-206ENST00000638465 BAZ1AQ9NRL2 1556 aaPredicted RBP24.38■■□□□ 1.49
RET-206ENST00000638465 HMGXB3Q12766 1538 aa24.35■■□□□ 1.49
RET-206ENST00000638465 PEG3Q9GZU2 1588 aa24.25■■□□□ 1.47
RET-206ENST00000638465 BAZ1BQ9UIG0 1483 aaKnown RBP24.2■■□□□ 1.47
RET-206ENST00000638465 MROH2BQ7Z745 1585 aa24.13■■□□□ 1.45
RET-206ENST00000638465 ERCC6Q03468 1493 aa24.1■■□□□ 1.45
RET-206ENST00000638465 CUX2O14529 1486 aa24.07■■□□□ 1.44
RET-206ENST00000638465 NESP48681 1621 aa23.95■■□□□ 1.43
RET-206ENST00000638465 LAMC3Q9Y6N6 1575 aa23.93■■□□□ 1.42
RET-206ENST00000638465 DNAJC5Q9H3Z4 198 aa23.87■■□□□ 1.41
RET-206ENST00000638465 PDS5BQ9NTI5 1447 aa23.84■■□□□ 1.41
RET-206ENST00000638465 CADPSQ9ULU8 1353 aa23.8■■□□□ 1.4
RET-206ENST00000638465 WIZO95785 1651 aa23.8■■□□□ 1.4
RET-206ENST00000638465 RSF1Q96T23 1441 aaPredicted RBP23.76■■□□□ 1.39
RET-206ENST00000638465 THOC2Q8NI27 1593 aaKnown RBP23.71■■□□□ 1.39
RET-206ENST00000638465 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
RET-206ENST00000638465 KIF21AQ7Z4S6 1674 aa23.62■■□□□ 1.37
RET-206ENST00000638465 TOP2AP11388 1531 aaKnown RBP23.61■■□□□ 1.37
RET-206ENST00000638465 MRC2Q9UBG0 1479 aa23.56■■□□□ 1.36
RET-206ENST00000638465 CFTRP13569 1480 aa23.56■■□□□ 1.36
RET-206ENST00000638465 CEP164Q9UPV0 1460 aa23.49■■□□□ 1.35
RET-206ENST00000638465 WDR62O43379 1518 aa23.49■■□□□ 1.35
RET-206ENST00000638465 FANCD2Q9BXW9 1451 aa23.48■■□□□ 1.35
RET-206ENST00000638465 CCDC88BA6NC98 1476 aa23.33■■□□□ 1.33
RET-206ENST00000638465 URB2Q14146 1524 aaKnown RBP23.23■■□□□ 1.31
RET-206ENST00000638465 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
RET-206ENST00000638465 ABCC8Q09428 1581 aa23.13■■□□□ 1.29
RET-206ENST00000638465 IFT140Q96RY7 1462 aa23.06■■□□□ 1.28
RET-206ENST00000638465 TOPBP1Q92547 1522 aa23.04■■□□□ 1.28
RET-206ENST00000638465 OSCARQ8IYS5 282 aa23.02■■□□□ 1.28
RET-206ENST00000638465 DNMBPQ6XZF7 1577 aa22.97■■□□□ 1.27
RET-206ENST00000638465 ZNF608Q9ULD9 1512 aaPredicted RBP22.9■■□□□ 1.26
RET-206ENST00000638465 POLA1P09884 1462 aaPredicted RBP22.81■■□□□ 1.24
RET-206ENST00000638465 TARBP1Q13395 1621 aaKnown RBP22.8■■□□□ 1.24
RET-206ENST00000638465 EIF4G3O43432 1585 aaKnown RBP22.77■■□□□ 1.24
RET-206ENST00000638465 TRIM41Q8WV44 630 aa22.76■■□□□ 1.23
RET-206ENST00000638465 SOGA1O94964 1423 aa22.75■■□□□ 1.23
RET-206ENST00000638465 SUPT5HO00267 1087 aaKnown RBP22.75■■□□□ 1.23
RET-206ENST00000638465 AQRO60306 1485 aaKnown RBP eCLIP22.73■■□□□ 1.23
RET-206ENST00000638465 WDR97A6NE52 1622 aa22.7■■□□□ 1.22
RET-206ENST00000638465 RAD54L2Q9Y4B4 1467 aa22.68■■□□□ 1.22
RET-206ENST00000638465 FGD5Q6ZNL6 1462 aa22.67■■□□□ 1.22
RET-206ENST00000638465 CUX1P39880 1505 aa22.67■■□□□ 1.22
RET-206ENST00000638465 TDRD9Q8NDG6 1382 aaKnown RBP22.63■■□□□ 1.21
RET-206ENST00000638465 FBLN2P98095 1184 aa22.56■■□□□ 1.2
RET-206ENST00000638465 RIMBP3CA6NJZ7 1639 aa22.56■■□□□ 1.2
RET-206ENST00000638465 RIMBP3BA6NNM3 1639 aa22.56■■□□□ 1.2
RET-206ENST00000638465 RIMBP3Q9UFD9 1639 aa22.56■■□□□ 1.2
RET-206ENST00000638465 ARHGEF11O15085 1522 aa22.56■■□□□ 1.2
RET-206ENST00000638465 GRIN2BQ13224 1484 aa22.55■■□□□ 1.2
RET-206ENST00000638465 MAGI1Q96QZ7 1491 aaPredicted RBP22.54■■□□□ 1.2
RET-206ENST00000638465 CHD1O14646 1710 aa22.54■■□□□ 1.2
RET-206ENST00000638465 SNAPC4Q5SXM2 1469 aa22.51■■□□□ 1.19
RET-206ENST00000638465 ABCA10Q8WWZ4 1543 aa22.49■■□□□ 1.19
RET-206ENST00000638465 CHMP7Q8WUX9 453 aaPredicted RBP22.49■■□□□ 1.19
RET-206ENST00000638465 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
RET-206ENST00000638465 WRNQ14191 1432 aaPredicted RBP eCLIP22.46■■□□□ 1.19
RET-206ENST00000638465 SYNJ2O15056 1496 aa22.44■■□□□ 1.18
RET-206ENST00000638465 SYNJ1O43426 1573 aa22.4■■□□□ 1.18
RET-206ENST00000638465 CYB5RLQ6IPT4 315 aa22.39■■□□□ 1.17
RET-206ENST00000638465 TOP2BQ02880 1626 aa22.39■■□□□ 1.17
RET-206ENST00000638465 ABCA5Q8WWZ7 1642 aa22.38■■□□□ 1.17
RET-206ENST00000638465 CLASP1Q7Z460 1538 aa22.36■■□□□ 1.17
RET-206ENST00000638465 BIVM-ERCC5R4GMW8 1640 aa22.36■■□□□ 1.17
RET-206ENST00000638465 PBRM1Q86U86 1689 aa22.34■■□□□ 1.17
RET-206ENST00000638465 ARAP1Q96P48 1450 aa22.33■■□□□ 1.16
RET-206ENST00000638465 FHAD1B1AJZ9 1412 aa22.23■■□□□ 1.15
RET-206ENST00000638465 GRIN2AQ12879 1464 aa22.22■■□□□ 1.15
RET-206ENST00000638465 ERICH3Q5RHP9 1530 aa22.22■■□□□ 1.15
RET-206ENST00000638465 ADAMTS12P58397 1594 aa22.19■■□□□ 1.14
RET-206ENST00000638465 NUP160Q12769 1436 aa22.18■■□□□ 1.14
RET-206ENST00000638465 TRHP20396 242 aaPredicted RBP22.08■■□□□ 1.13
RET-206ENST00000638465 CEP170Q5SW79 1584 aa22.08■■□□□ 1.12
RET-206ENST00000638465 KIF27Q86VH2 1401 aa22.02■■□□□ 1.12
RET-206ENST00000638465 SHROOM2Q13796 1616 aa22.01■■□□□ 1.11
RET-206ENST00000638465 IGF1RP08069 1367 aa21.98■■□□□ 1.11
RET-206ENST00000638465 JPH4Q96JJ6 628 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms