RNA–Protein interactions for RNA: ENST00000638337.1

SYN1-203, Transcript of synapsin I, humanhuman

TSL 2

Gene SYN1, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1-203ENST00000638337 NISCHQ9Y2I1 1504 aa20.78■□□□□ 0.92
SYN1-203ENST00000638337 CCDC180Q9P1Z9 1646 aa18.66■□□□□ 0.58
SYN1-203ENST00000638337 ABCC9O60706 1549 aa18.45■□□□□ 0.54
SYN1-203ENST00000638337 RB1CC1Q8TDY2 1594 aa17.65■□□□□ 0.42
SYN1-203ENST00000638337 NACADO15069 1562 aa17.53■□□□□ 0.4
SYN1-203ENST00000638337 DCAF8L2P0C7V8 631 aa17.5■□□□□ 0.39
SYN1-203ENST00000638337 UNC13AQ9UPW8 1703 aa17.38■□□□□ 0.37
SYN1-203ENST00000638337 MYO15BQ96JP2 1530 aa17.29■□□□□ 0.36
SYN1-203ENST00000638337 ZCCHC6Q5VYS8 1495 aaKnown RBP17.27■□□□□ 0.36
SYN1-203ENST00000638337 PABPN1Q86U42 306 aaKnown RBP eCLIP17.16■□□□□ 0.34
SYN1-203ENST00000638337 DCAF1Q9Y4B6 1507 aa17.15■□□□□ 0.34
SYN1-203ENST00000638337 BICRAQ9NZM4 1560 aa17.11■□□□□ 0.33
SYN1-203ENST00000638337 DNAJC5BQ9UF47 199 aa17.08■□□□□ 0.32
SYN1-203ENST00000638337 SCRIBQ14160 1630 aa17.03■□□□□ 0.32
SYN1-203ENST00000638337 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
SYN1-203ENST00000638337 SHROOM4Q9ULL8 1493 aa16.84■□□□□ 0.29
SYN1-203ENST00000638337 CC2D2AQ9P2K1 1620 aa16.7■□□□□ 0.26
SYN1-203ENST00000638337 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
SYN1-203ENST00000638337 CECR2Q9BXF3 1484 aa16.58■□□□□ 0.24
SYN1-203ENST00000638337 SMARCA4P51532 1647 aa16.23■□□□□ 0.19
SYN1-203ENST00000638337 BAZ1AQ9NRL2 1556 aaPredicted RBP16.15■□□□□ 0.18
SYN1-203ENST00000638337 ATAD2BQ9ULI0 1458 aa16.14■□□□□ 0.17
SYN1-203ENST00000638337 SMARCA2P51531 1590 aa16.13■□□□□ 0.17
SYN1-203ENST00000638337 NCAPD3P42695 1498 aa16.13■□□□□ 0.17
SYN1-203ENST00000638337 CHIC1Q5VXU3 224 aa16.11■□□□□ 0.17
SYN1-203ENST00000638337 HMGXB3Q12766 1538 aa16.09■□□□□ 0.17
SYN1-203ENST00000638337 MROH2BQ7Z745 1585 aa16.04■□□□□ 0.16
SYN1-203ENST00000638337 BAZ1BQ9UIG0 1483 aaKnown RBP16.03■□□□□ 0.16
SYN1-203ENST00000638337 PEG3Q9GZU2 1588 aa16.02■□□□□ 0.16
SYN1-203ENST00000638337 ERCC6Q03468 1493 aa15.92■□□□□ 0.14
SYN1-203ENST00000638337 WIZO95785 1651 aa15.92■□□□□ 0.14
SYN1-203ENST00000638337 NESP48681 1621 aa15.9■□□□□ 0.14
SYN1-203ENST00000638337 LAMC3Q9Y6N6 1575 aa15.82■□□□□ 0.12
SYN1-203ENST00000638337 KIF21AQ7Z4S6 1674 aa15.79■□□□□ 0.12
SYN1-203ENST00000638337 CUX2O14529 1486 aa15.78■□□□□ 0.12
SYN1-203ENST00000638337 THOC2Q8NI27 1593 aaKnown RBP15.74■□□□□ 0.11
SYN1-203ENST00000638337 RSF1Q96T23 1441 aaPredicted RBP15.72■□□□□ 0.11
SYN1-203ENST00000638337 TOP2AP11388 1531 aaKnown RBP15.68■□□□□ 0.1
SYN1-203ENST00000638337 PDS5BQ9NTI5 1447 aa15.67■□□□□ 0.1
SYN1-203ENST00000638337 CADPSQ9ULU8 1353 aa15.65■□□□□ 0.1
SYN1-203ENST00000638337 PRDM2Q13029 1718 aa15.58■□□□□ 0.08
SYN1-203ENST00000638337 MRC2Q9UBG0 1479 aa15.55■□□□□ 0.08
SYN1-203ENST00000638337 DNAJC5Q9H3Z4 198 aa15.54■□□□□ 0.08
SYN1-203ENST00000638337 CEP164Q9UPV0 1460 aa15.53■□□□□ 0.08
SYN1-203ENST00000638337 CFTRP13569 1480 aa15.52■□□□□ 0.08
SYN1-203ENST00000638337 FANCD2Q9BXW9 1451 aa15.52■□□□□ 0.08
SYN1-203ENST00000638337 WDR62O43379 1518 aa15.52■□□□□ 0.07
SYN1-203ENST00000638337 CCDC88BA6NC98 1476 aa15.47■□□□□ 0.07
SYN1-203ENST00000638337 URB2Q14146 1524 aaKnown RBP15.39■□□□□ 0.05
SYN1-203ENST00000638337 TOPBP1Q92547 1522 aa15.26■□□□□ 0.03
SYN1-203ENST00000638337 DNMBPQ6XZF7 1577 aa15.24■□□□□ 0.03
SYN1-203ENST00000638337 ABCC8Q09428 1581 aa15.21■□□□□ 0.03
SYN1-203ENST00000638337 SUPT5HO00267 1087 aaKnown RBP15.2■□□□□ 0.02
SYN1-203ENST00000638337 IFT140Q96RY7 1462 aa15.2■□□□□ 0.02
SYN1-203ENST00000638337 ZNF608Q9ULD9 1512 aaPredicted RBP15.17■□□□□ 0.02
SYN1-203ENST00000638337 EIF4G3O43432 1585 aaKnown RBP15.16■□□□□ 0.02
SYN1-203ENST00000638337 TARBP1Q13395 1621 aaKnown RBP15.13■□□□□ 0.01
SYN1-203ENST00000638337 POLA1P09884 1462 aaPredicted RBP15.1■□□□□ 0.01
SYN1-203ENST00000638337 CHD1O14646 1710 aa15.08■□□□□ 0
SYN1-203ENST00000638337 OSCARQ8IYS5 282 aa15.07■□□□□ 0
SYN1-203ENST00000638337 CUX1P39880 1505 aa15.07■□□□□ 0
SYN1-203ENST00000638337 RAD54L2Q9Y4B4 1467 aa15.06■□□□□ 0
SYN1-203ENST00000638337 FGD5Q6ZNL6 1462 aa15.05■□□□□ -0
SYN1-203ENST00000638337 AQRO60306 1485 aaKnown RBP eCLIP15.04■□□□□ -0
SYN1-203ENST00000638337 SOGA1O94964 1423 aa15.01□□□□□ -0.01
SYN1-203ENST00000638337 TRIM41Q8WV44 630 aa15.01□□□□□ -0.01
SYN1-203ENST00000638337 WDR97A6NE52 1622 aa15□□□□□ -0.01
SYN1-203ENST00000638337 TDRD9Q8NDG6 1382 aaKnown RBP14.98□□□□□ -0.01
SYN1-203ENST00000638337 PBRM1Q86U86 1689 aa14.97□□□□□ -0.01
SYN1-203ENST00000638337 RIMBP3CA6NJZ7 1639 aa14.96□□□□□ -0.01
SYN1-203ENST00000638337 RIMBP3BA6NNM3 1639 aa14.96□□□□□ -0.01
SYN1-203ENST00000638337 RIMBP3Q9UFD9 1639 aa14.96□□□□□ -0.01
SYN1-203ENST00000638337 FBLN2P98095 1184 aa14.93□□□□□ -0.02
SYN1-203ENST00000638337 SNAPC4Q5SXM2 1469 aa14.92□□□□□ -0.02
SYN1-203ENST00000638337 BIVM-ERCC5R4GMW8 1640 aa14.92□□□□□ -0.02
SYN1-203ENST00000638337 ARHGEF11O15085 1522 aa14.89□□□□□ -0.03
SYN1-203ENST00000638337 SYNJ1O43426 1573 aa14.89□□□□□ -0.03
SYN1-203ENST00000638337 TOP2BQ02880 1626 aa14.88□□□□□ -0.03
SYN1-203ENST00000638337 GRIN2BQ13224 1484 aa14.88□□□□□ -0.03
SYN1-203ENST00000638337 ABCA5Q8WWZ7 1642 aa14.88□□□□□ -0.03
SYN1-203ENST00000638337 MAGI1Q96QZ7 1491 aaPredicted RBP14.87□□□□□ -0.03
SYN1-203ENST00000638337 ABCA10Q8WWZ4 1543 aa14.87□□□□□ -0.03
SYN1-203ENST00000638337 GAPVD1Q14C86 1478 aa14.86□□□□□ -0.03
SYN1-203ENST00000638337 WRNQ14191 1432 aaPredicted RBP eCLIP14.85□□□□□ -0.03
SYN1-203ENST00000638337 CHMP7Q8WUX9 453 aaPredicted RBP14.81□□□□□ -0.04
SYN1-203ENST00000638337 SYNJ2O15056 1496 aa14.81□□□□□ -0.04
SYN1-203ENST00000638337 CLASP1Q7Z460 1538 aa14.79□□□□□ -0.04
SYN1-203ENST00000638337 ADAMTS12P58397 1594 aa14.76□□□□□ -0.05
SYN1-203ENST00000638337 CYB5RLQ6IPT4 315 aa14.74□□□□□ -0.05
SYN1-203ENST00000638337 ARAP1Q96P48 1450 aa14.74□□□□□ -0.05
SYN1-203ENST00000638337 GRIN2AQ12879 1464 aa14.7□□□□□ -0.06
SYN1-203ENST00000638337 ERICH3Q5RHP9 1530 aa14.69□□□□□ -0.06
SYN1-203ENST00000638337 CEP170Q5SW79 1584 aa14.68□□□□□ -0.06
SYN1-203ENST00000638337 FHAD1B1AJZ9 1412 aa14.66□□□□□ -0.06
SYN1-203ENST00000638337 NUP160Q12769 1436 aa14.61□□□□□ -0.07
SYN1-203ENST00000638337 ERCC6L2Q5T890 1561 aa14.6□□□□□ -0.07
SYN1-203ENST00000638337 SHROOM2Q13796 1616 aa14.59□□□□□ -0.07
SYN1-203ENST00000638337 CUL7Q14999 1698 aa14.57□□□□□ -0.08
SYN1-203ENST00000638337 TRHP20396 242 aaPredicted RBP14.55□□□□□ -0.08
SYN1-203ENST00000638337 KIF27Q86VH2 1401 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms