RNA–Protein interactions for RNA: ENST00000638278.1

PAX6-233, Transcript of paired box 6, humanhuman

Gene PAX6, Length 417 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-233ENST00000638278 NISCHQ9Y2I1 1504 aa41.89■■■■■ 4.3
PAX6-233ENST00000638278 CCDC180Q9P1Z9 1646 aa37.31■■■■□ 3.56
PAX6-233ENST00000638278 ABCC9O60706 1549 aa36.39■■■■□ 3.42
PAX6-233ENST00000638278 RB1CC1Q8TDY2 1594 aa35.07■■■■□ 3.2
PAX6-233ENST00000638278 NACADO15069 1562 aa35.01■■■■□ 3.2
PAX6-233ENST00000638278 DCAF8L2P0C7V8 631 aa34.99■■■■□ 3.19
PAX6-233ENST00000638278 ZCCHC6Q5VYS8 1495 aaKnown RBP34.91■■■■□ 3.18
PAX6-233ENST00000638278 MYO15BQ96JP2 1530 aa34.78■■■■□ 3.16
PAX6-233ENST00000638278 DCAF1Q9Y4B6 1507 aa34.66■■■■□ 3.14
PAX6-233ENST00000638278 UNC13AQ9UPW8 1703 aa34.33■■■■□ 3.09
PAX6-233ENST00000638278 SCRIBQ14160 1630 aa34.04■■■■□ 3.04
PAX6-233ENST00000638278 PABPN1Q86U42 306 aaKnown RBP eCLIP33.97■■■■□ 3.03
PAX6-233ENST00000638278 BICRAQ9NZM4 1560 aa33.95■■■■□ 3.03
PAX6-233ENST00000638278 SHROOM4Q9ULL8 1493 aa33.62■■■□□ 2.97
PAX6-233ENST00000638278 DNAJC5BQ9UF47 199 aa33.24■■■□□ 2.91
PAX6-233ENST00000638278 EIF4G1Q04637 1599 aaKnown RBP33.08■■■□□ 2.89
PAX6-233ENST00000638278 CC2D2AQ9P2K1 1620 aa32.94■■■□□ 2.86
PAX6-233ENST00000638278 CECR2Q9BXF3 1484 aa32.68■■■□□ 2.82
PAX6-233ENST00000638278 SMARCA4P51532 1647 aa32.54■■■□□ 2.8
PAX6-233ENST00000638278 BAZ1AQ9NRL2 1556 aaPredicted RBP32.5■■■□□ 2.79
PAX6-233ENST00000638278 SMARCA2P51531 1590 aa32.32■■■□□ 2.76
PAX6-233ENST00000638278 ATAD2BQ9ULI0 1458 aa32.29■■■□□ 2.76
PAX6-233ENST00000638278 MROH2BQ7Z745 1585 aa32.28■■■□□ 2.76
PAX6-233ENST00000638278 NCAPD3P42695 1498 aa32.24■■■□□ 2.75
PAX6-233ENST00000638278 PEG3Q9GZU2 1588 aa32.18■■■□□ 2.74
PAX6-233ENST00000638278 HMGXB3Q12766 1538 aa32.16■■■□□ 2.74
PAX6-233ENST00000638278 BAZ1BQ9UIG0 1483 aaKnown RBP32.07■■■□□ 2.72
PAX6-233ENST00000638278 WIZO95785 1651 aa31.99■■■□□ 2.71
PAX6-233ENST00000638278 RSF1Q96T23 1441 aaPredicted RBP31.91■■■□□ 2.7
PAX6-233ENST00000638278 TOP2AP11388 1531 aaKnown RBP31.65■■■□□ 2.66
PAX6-233ENST00000638278 NESP48681 1621 aa31.49■■■□□ 2.63
PAX6-233ENST00000638278 LAMC3Q9Y6N6 1575 aa31.46■■■□□ 2.63
PAX6-233ENST00000638278 ERCC6Q03468 1493 aa31.4■■■□□ 2.62
PAX6-233ENST00000638278 CADPSQ9ULU8 1353 aa31.31■■■□□ 2.6
PAX6-233ENST00000638278 CCDC88BA6NC98 1476 aa31.22■■■□□ 2.59
PAX6-233ENST00000638278 PDS5BQ9NTI5 1447 aa31.22■■■□□ 2.59
PAX6-233ENST00000638278 KIF21AQ7Z4S6 1674 aa31.22■■■□□ 2.59
PAX6-233ENST00000638278 SUPT5HO00267 1087 aaKnown RBP31.19■■■□□ 2.58
PAX6-233ENST00000638278 CFTRP13569 1480 aa31.15■■■□□ 2.58
PAX6-233ENST00000638278 PRDM2Q13029 1718 aa31.09■■■□□ 2.57
PAX6-233ENST00000638278 THOC2Q8NI27 1593 aaKnown RBP31.05■■■□□ 2.56
PAX6-233ENST00000638278 CUX2O14529 1486 aa31.01■■■□□ 2.56
PAX6-233ENST00000638278 FANCD2Q9BXW9 1451 aa31■■■□□ 2.55
PAX6-233ENST00000638278 CEP164Q9UPV0 1460 aa30.98■■■□□ 2.55
PAX6-233ENST00000638278 MRC2Q9UBG0 1479 aa30.91■■■□□ 2.54
PAX6-233ENST00000638278 WDR62O43379 1518 aa30.8■■■□□ 2.52
PAX6-233ENST00000638278 URB2Q14146 1524 aaKnown RBP30.68■■■□□ 2.5
PAX6-233ENST00000638278 ABCC8Q09428 1581 aa30.53■■■□□ 2.48
PAX6-233ENST00000638278 DNMBPQ6XZF7 1577 aa30.51■■■□□ 2.47
PAX6-233ENST00000638278 TOPBP1Q92547 1522 aa30.51■■■□□ 2.47
PAX6-233ENST00000638278 IFT140Q96RY7 1462 aa30.31■■■□□ 2.44
PAX6-233ENST00000638278 CUX1P39880 1505 aa30.29■■■□□ 2.44
PAX6-233ENST00000638278 POLA1P09884 1462 aaPredicted RBP30.25■■■□□ 2.43
PAX6-233ENST00000638278 FGD5Q6ZNL6 1462 aa30.2■■■□□ 2.43
PAX6-233ENST00000638278 TARBP1Q13395 1621 aaKnown RBP30.18■■■□□ 2.42
PAX6-233ENST00000638278 ZNF608Q9ULD9 1512 aaPredicted RBP30.14■■■□□ 2.42
PAX6-233ENST00000638278 WRNQ14191 1432 aaPredicted RBP eCLIP30.13■■■□□ 2.41
PAX6-233ENST00000638278 SOGA1O94964 1423 aa30.11■■■□□ 2.41
PAX6-233ENST00000638278 RAD54L2Q9Y4B4 1467 aa30.11■■■□□ 2.41
PAX6-233ENST00000638278 EIF4G3O43432 1585 aaKnown RBP30.1■■■□□ 2.41
PAX6-233ENST00000638278 BIVM-ERCC5R4GMW8 1640 aa30.1■■■□□ 2.41
PAX6-233ENST00000638278 TOP2BQ02880 1626 aa30.07■■■□□ 2.4
PAX6-233ENST00000638278 SYNJ1O43426 1573 aa30.07■■■□□ 2.4
PAX6-233ENST00000638278 WDR97A6NE52 1622 aa30■■■□□ 2.39
PAX6-233ENST00000638278 AQRO60306 1485 aaKnown RBP eCLIP29.98■■■□□ 2.39
PAX6-233ENST00000638278 DNAJC5Q9H3Z4 198 aa29.93■■■□□ 2.38
PAX6-233ENST00000638278 TDRD9Q8NDG6 1382 aaKnown RBP29.92■■■□□ 2.38
PAX6-233ENST00000638278 ABCA10Q8WWZ4 1543 aa29.9■■■□□ 2.38
PAX6-233ENST00000638278 PBRM1Q86U86 1689 aa29.82■■■□□ 2.36
PAX6-233ENST00000638278 ABCA5Q8WWZ7 1642 aa29.81■■■□□ 2.36
PAX6-233ENST00000638278 GAPVD1Q14C86 1478 aa29.79■■■□□ 2.36
PAX6-233ENST00000638278 GRIN2BQ13224 1484 aa29.78■■■□□ 2.36
PAX6-233ENST00000638278 CHD1O14646 1710 aa29.76■■■□□ 2.35
PAX6-233ENST00000638278 SNAPC4Q5SXM2 1469 aa29.74■■■□□ 2.35
PAX6-233ENST00000638278 OSCARQ8IYS5 282 aa29.71■■■□□ 2.35
PAX6-233ENST00000638278 MAGI1Q96QZ7 1491 aaPredicted RBP29.7■■■□□ 2.35
PAX6-233ENST00000638278 FBLN2P98095 1184 aa29.64■■■□□ 2.34
PAX6-233ENST00000638278 SYNJ2O15056 1496 aa29.57■■■□□ 2.32
PAX6-233ENST00000638278 CHMP7Q8WUX9 453 aaPredicted RBP29.56■■■□□ 2.32
PAX6-233ENST00000638278 ERICH3Q5RHP9 1530 aa29.55■■■□□ 2.32
PAX6-233ENST00000638278 ADAMTS12P58397 1594 aa29.52■■■□□ 2.32
PAX6-233ENST00000638278 KIF27Q86VH2 1401 aa29.5■■■□□ 2.31
PAX6-233ENST00000638278 FHAD1B1AJZ9 1412 aa29.44■■■□□ 2.3
PAX6-233ENST00000638278 TRIM41Q8WV44 630 aa29.43■■■□□ 2.3
PAX6-233ENST00000638278 GRIN2AQ12879 1464 aa29.39■■■□□ 2.3
PAX6-233ENST00000638278 CUL7Q14999 1698 aa29.35■■■□□ 2.29
PAX6-233ENST00000638278 CLASP1Q7Z460 1538 aa29.35■■■□□ 2.29
PAX6-233ENST00000638278 IGF1RP08069 1367 aa29.3■■■□□ 2.28
PAX6-233ENST00000638278 RIMBP3CA6NJZ7 1639 aa29.3■■■□□ 2.28
PAX6-233ENST00000638278 RIMBP3BA6NNM3 1639 aa29.3■■■□□ 2.28
PAX6-233ENST00000638278 RIMBP3Q9UFD9 1639 aa29.3■■■□□ 2.28
PAX6-233ENST00000638278 ARHGEF11O15085 1522 aa29.26■■■□□ 2.27
PAX6-233ENST00000638278 CEP170Q5SW79 1584 aa29.26■■■□□ 2.27
PAX6-233ENST00000638278 NUP160Q12769 1436 aa29.24■■■□□ 2.27
PAX6-233ENST00000638278 RUSC2Q8N2Y8 1516 aa29.2■■■□□ 2.27
PAX6-233ENST00000638278 CARMIL1Q5VZK9 1371 aa29.18■■■□□ 2.26
PAX6-233ENST00000638278 CHIC1Q5VXU3 224 aa29.08■■■□□ 2.25
PAX6-233ENST00000638278 SHROOM2Q13796 1616 aa29.05■■■□□ 2.24
PAX6-233ENST00000638278 RAPGEF2Q9Y4G8 1499 aa29.03■■■□□ 2.24
PAX6-233ENST00000638278 ARAP1Q96P48 1450 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms