RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 NISCHQ9Y2I1 1504 aa27.53■■■□□ 2
CACNA1D-228ENST00000638120 CCDC180Q9P1Z9 1646 aa23.97■■□□□ 1.43
CACNA1D-228ENST00000638120 ZCCHC6Q5VYS8 1495 aaKnown RBP23.18■■□□□ 1.3
CACNA1D-228ENST00000638120 DCAF1Q9Y4B6 1507 aa22.79■■□□□ 1.24
CACNA1D-228ENST00000638120 DCAF8L2P0C7V8 631 aa22.59■■□□□ 1.21
CACNA1D-228ENST00000638120 SHROOM4Q9ULL8 1493 aa22.52■■□□□ 1.2
CACNA1D-228ENST00000638120 ABCC9O60706 1549 aa22.48■■□□□ 1.19
CACNA1D-228ENST00000638120 MYO15BQ96JP2 1530 aa22.46■■□□□ 1.19
CACNA1D-228ENST00000638120 NACADO15069 1562 aa22.27■■□□□ 1.15
CACNA1D-228ENST00000638120 SCRIBQ14160 1630 aa22.04■■□□□ 1.12
CACNA1D-228ENST00000638120 RB1CC1Q8TDY2 1594 aa22.04■■□□□ 1.12
CACNA1D-228ENST00000638120 SUPT5HO00267 1087 aaKnown RBP21.71■■□□□ 1.07
CACNA1D-228ENST00000638120 UNC13AQ9UPW8 1703 aa21.63■■□□□ 1.05
CACNA1D-228ENST00000638120 RSF1Q96T23 1441 aaPredicted RBP21.4■■□□□ 1.02
CACNA1D-228ENST00000638120 BICRAQ9NZM4 1560 aa21.39■■□□□ 1.01
CACNA1D-228ENST00000638120 CECR2Q9BXF3 1484 aa21.37■■□□□ 1.01
CACNA1D-228ENST00000638120 MROH2BQ7Z745 1585 aa21.28■■□□□ 1
CACNA1D-228ENST00000638120 BAZ1AQ9NRL2 1556 aaPredicted RBP21.25■□□□□ 0.99
CACNA1D-228ENST00000638120 PABPN1Q86U42 306 aaKnown RBP eCLIP21.19■□□□□ 0.98
CACNA1D-228ENST00000638120 SMARCA4P51532 1647 aa21.15■□□□□ 0.98
CACNA1D-228ENST00000638120 WIZO95785 1651 aa21.12■□□□□ 0.97
CACNA1D-228ENST00000638120 TOP2AP11388 1531 aaKnown RBP20.91■□□□□ 0.94
CACNA1D-228ENST00000638120 PEG3Q9GZU2 1588 aa20.89■□□□□ 0.93
CACNA1D-228ENST00000638120 CHIC1Q5VXU3 224 aa20.89■□□□□ 0.93
CACNA1D-228ENST00000638120 SMARCA2P51531 1590 aa20.74■□□□□ 0.91
CACNA1D-228ENST00000638120 ATAD2BQ9ULI0 1458 aa20.74■□□□□ 0.91
CACNA1D-228ENST00000638120 EIF4G1Q04637 1599 aaKnown RBP20.72■□□□□ 0.91
CACNA1D-228ENST00000638120 CCDC88BA6NC98 1476 aa20.67■□□□□ 0.9
CACNA1D-228ENST00000638120 BAZ1BQ9UIG0 1483 aaKnown RBP20.64■□□□□ 0.89
CACNA1D-228ENST00000638120 HMGXB3Q12766 1538 aa20.55■□□□□ 0.88
CACNA1D-228ENST00000638120 NCAPD3P42695 1498 aa20.54■□□□□ 0.88
CACNA1D-228ENST00000638120 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
CACNA1D-228ENST00000638120 CC2D2AQ9P2K1 1620 aa20.37■□□□□ 0.85
CACNA1D-228ENST00000638120 ABCC8Q09428 1581 aa20.3■□□□□ 0.84
CACNA1D-228ENST00000638120 WRNQ14191 1432 aaPredicted RBP eCLIP20.14■□□□□ 0.81
CACNA1D-228ENST00000638120 CFTRP13569 1480 aa20.13■□□□□ 0.81
CACNA1D-228ENST00000638120 SYNJ1O43426 1573 aa20.08■□□□□ 0.81
CACNA1D-228ENST00000638120 PRDM2Q13029 1718 aa20.08■□□□□ 0.81
CACNA1D-228ENST00000638120 LOC105371045A0A1W2PR82 267 aa20.07■□□□□ 0.8
CACNA1D-228ENST00000638120 FAM9AQ8IZU1 332 aaPredicted RBP20.03■□□□□ 0.8
CACNA1D-228ENST00000638120 CADPSQ9ULU8 1353 aa20■□□□□ 0.79
CACNA1D-228ENST00000638120 TOP2BQ02880 1626 aa19.99■□□□□ 0.79
CACNA1D-228ENST00000638120 BIVM-ERCC5R4GMW8 1640 aa19.98■□□□□ 0.79
CACNA1D-228ENST00000638120 EEA1Q15075 1411 aa19.95■□□□□ 0.78
CACNA1D-228ENST00000638120 SOGA1O94964 1423 aa19.93■□□□□ 0.78
CACNA1D-228ENST00000638120 CUX1P39880 1505 aa19.89■□□□□ 0.78
CACNA1D-228ENST00000638120 RUSC2Q8N2Y8 1516 aa19.85■□□□□ 0.77
CACNA1D-228ENST00000638120 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.76
CACNA1D-228ENST00000638120 FANCD2Q9BXW9 1451 aa19.8■□□□□ 0.76
CACNA1D-228ENST00000638120 NESP48681 1621 aa19.79■□□□□ 0.76
CACNA1D-228ENST00000638120 CSRNP3Q8WYN3 585 aa19.77■□□□□ 0.76
CACNA1D-228ENST00000638120 DNAJC5BQ9UF47 199 aa19.76■□□□□ 0.75
CACNA1D-228ENST00000638120 EHMT2Q96KQ7 1210 aa19.73■□□□□ 0.75
CACNA1D-228ENST00000638120 KIF21BO75037 1637 aa19.7■□□□□ 0.74
CACNA1D-228ENST00000638120 GOLGA3Q08378 1498 aa19.68■□□□□ 0.74
CACNA1D-228ENST00000638120 DNMBPQ6XZF7 1577 aa19.67■□□□□ 0.74
CACNA1D-228ENST00000638120 CEP164Q9UPV0 1460 aa19.67■□□□□ 0.74
CACNA1D-228ENST00000638120 FGD5Q6ZNL6 1462 aa19.64■□□□□ 0.74
CACNA1D-228ENST00000638120 PDS5BQ9NTI5 1447 aa19.64■□□□□ 0.73
CACNA1D-228ENST00000638120 TNIKQ9UKE5 1360 aa19.62■□□□□ 0.73
CACNA1D-228ENST00000638120 KIF27Q86VH2 1401 aa19.62■□□□□ 0.73
CACNA1D-228ENST00000638120 TOPBP1Q92547 1522 aa19.61■□□□□ 0.73
CACNA1D-228ENST00000638120 KIF21AQ7Z4S6 1674 aa19.59■□□□□ 0.73
CACNA1D-228ENST00000638120 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
CACNA1D-228ENST00000638120 CEP162Q5TB80 1403 aa19.55■□□□□ 0.72
CACNA1D-228ENST00000638120 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
CACNA1D-228ENST00000638120 PRXQ9BXM0 1461 aa19.54■□□□□ 0.72
CACNA1D-228ENST00000638120 CUX2O14529 1486 aa19.53■□□□□ 0.72
CACNA1D-228ENST00000638120 POLA1P09884 1462 aaPredicted RBP19.53■□□□□ 0.72
CACNA1D-228ENST00000638120 RAPGEF2Q9Y4G8 1499 aa19.53■□□□□ 0.72
CACNA1D-228ENST00000638120 UBTFP17480 764 aaKnown RBP19.51■□□□□ 0.71
CACNA1D-228ENST00000638120 ABCA10Q8WWZ4 1543 aa19.47■□□□□ 0.71
CACNA1D-228ENST00000638120 RAD54L2Q9Y4B4 1467 aa19.45■□□□□ 0.7
CACNA1D-228ENST00000638120 WDR97A6NE52 1622 aa19.44■□□□□ 0.7
CACNA1D-228ENST00000638120 IGF1RP08069 1367 aa19.41■□□□□ 0.7
CACNA1D-228ENST00000638120 MRC2Q9UBG0 1479 aa19.4■□□□□ 0.7
CACNA1D-228ENST00000638120 CLIP1P30622 1438 aa19.35■□□□□ 0.69
CACNA1D-228ENST00000638120 ABCA5Q8WWZ7 1642 aa19.33■□□□□ 0.69
CACNA1D-228ENST00000638120 TARBP1Q13395 1621 aaKnown RBP19.32■□□□□ 0.68
CACNA1D-228ENST00000638120 CARMIL1Q5VZK9 1371 aa19.32■□□□□ 0.68
CACNA1D-228ENST00000638120 WDR62O43379 1518 aa19.31■□□□□ 0.68
CACNA1D-228ENST00000638120 CUL7Q14999 1698 aa19.3■□□□□ 0.68
CACNA1D-228ENST00000638120 PCGF6Q9BYE7 350 aa19.3■□□□□ 0.68
CACNA1D-228ENST00000638120 TRIM26Q12899 539 aaPredicted RBP19.28■□□□□ 0.68
CACNA1D-228ENST00000638120 ERCC6Q03468 1493 aa19.25■□□□□ 0.67
CACNA1D-228ENST00000638120 GAPVD1Q14C86 1478 aa19.25■□□□□ 0.67
CACNA1D-228ENST00000638120 THOC2Q8NI27 1593 aaKnown RBP19.23■□□□□ 0.67
CACNA1D-228ENST00000638120 TDRD9Q8NDG6 1382 aaKnown RBP19.23■□□□□ 0.67
CACNA1D-228ENST00000638120 VPS8Q8N3P4 1428 aa19.22■□□□□ 0.67
CACNA1D-228ENST00000638120 IFT140Q96RY7 1462 aa19.18■□□□□ 0.66
CACNA1D-228ENST00000638120 PBRM1Q86U86 1689 aa19.17■□□□□ 0.66
CACNA1D-228ENST00000638120 ARAP1Q96P48 1450 aa19.17■□□□□ 0.66
CACNA1D-228ENST00000638120 RANGAP1P46060 587 aaPredicted RBP19.14■□□□□ 0.65
CACNA1D-228ENST00000638120 ARHGAP35Q9NRY4 1499 aa19.13■□□□□ 0.65
CACNA1D-228ENST00000638120 CTTNBP2Q8WZ74 1663 aa19.12■□□□□ 0.65
CACNA1D-228ENST00000638120 PPARGC1BQ86YN6 1023 aaKnown RBP19.1■□□□□ 0.65
CACNA1D-228ENST00000638120 AQRO60306 1485 aaKnown RBP eCLIP19.09■□□□□ 0.65
CACNA1D-228ENST00000638120 GRIN2BQ13224 1484 aa19.07■□□□□ 0.64
CACNA1D-228ENST00000638120 ZNF608Q9ULD9 1512 aaPredicted RBP19.07■□□□□ 0.64
CACNA1D-228ENST00000638120 ADAMTS12P58397 1594 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms