RNA–Protein interactions for RNA: ENST00000637842.1

RBMS3-220, Transcript of RNA binding motif single stranded interacting protein 3, humanhuman

TSL 5

Gene RBMS3, Length 1,458 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBMS3-220ENST00000637842 NISCHQ9Y2I1 1504 aa23.78■■□□□ 1.4
RBMS3-220ENST00000637842 ABCC9O60706 1549 aa22.53■■□□□ 1.2
RBMS3-220ENST00000637842 DNAJC5BQ9UF47 199 aa21.94■■□□□ 1.1
RBMS3-220ENST00000637842 CCDC180Q9P1Z9 1646 aa21.62■■□□□ 1.05
RBMS3-220ENST00000637842 RB1CC1Q8TDY2 1594 aa21.06■□□□□ 0.96
RBMS3-220ENST00000637842 PABPN1Q86U42 306 aaKnown RBP eCLIP20.91■□□□□ 0.94
RBMS3-220ENST00000637842 DNAJC5Q9H3Z4 198 aa20.82■□□□□ 0.92
RBMS3-220ENST00000637842 NACADO15069 1562 aa20.73■□□□□ 0.91
RBMS3-220ENST00000637842 DCAF8L2P0C7V8 631 aa20.59■□□□□ 0.89
RBMS3-220ENST00000637842 BICRAQ9NZM4 1560 aa20.43■□□□□ 0.86
RBMS3-220ENST00000637842 UNC13AQ9UPW8 1703 aa20.41■□□□□ 0.86
RBMS3-220ENST00000637842 CECR2Q9BXF3 1484 aa20.41■□□□□ 0.86
RBMS3-220ENST00000637842 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.83
RBMS3-220ENST00000637842 MYO15BQ96JP2 1530 aa20.19■□□□□ 0.82
RBMS3-220ENST00000637842 SHROOM4Q9ULL8 1493 aa20.14■□□□□ 0.81
RBMS3-220ENST00000637842 EIF4G1Q04637 1599 aaKnown RBP20.02■□□□□ 0.8
RBMS3-220ENST00000637842 CUX2O14529 1486 aa19.79■□□□□ 0.76
RBMS3-220ENST00000637842 SCRIBQ14160 1630 aa19.68■□□□□ 0.74
RBMS3-220ENST00000637842 DCAF1Q9Y4B6 1507 aa19.6■□□□□ 0.73
RBMS3-220ENST00000637842 ERCC6Q03468 1493 aa19.55■□□□□ 0.72
RBMS3-220ENST00000637842 TRIM41Q8WV44 630 aa19.54■□□□□ 0.72
RBMS3-220ENST00000637842 ZCCHC6Q5VYS8 1495 aaKnown RBP19.49■□□□□ 0.71
RBMS3-220ENST00000637842 NCAPD3P42695 1498 aa19.2■□□□□ 0.66
RBMS3-220ENST00000637842 NESP48681 1621 aa19.09■□□□□ 0.65
RBMS3-220ENST00000637842 THOC2Q8NI27 1593 aaKnown RBP19■□□□□ 0.63
RBMS3-220ENST00000637842 ATAD2BQ9ULI0 1458 aa18.98■□□□□ 0.63
RBMS3-220ENST00000637842 HMGXB3Q12766 1538 aa18.89■□□□□ 0.61
RBMS3-220ENST00000637842 SMARCA2P51531 1590 aa18.87■□□□□ 0.61
RBMS3-220ENST00000637842 OSCARQ8IYS5 282 aa18.85■□□□□ 0.61
RBMS3-220ENST00000637842 PDS5BQ9NTI5 1447 aa18.84■□□□□ 0.61
RBMS3-220ENST00000637842 LAMC3Q9Y6N6 1575 aa18.83■□□□□ 0.61
RBMS3-220ENST00000637842 BAZ1BQ9UIG0 1483 aaKnown RBP18.75■□□□□ 0.59
RBMS3-220ENST00000637842 KIF21AQ7Z4S6 1674 aa18.72■□□□□ 0.59
RBMS3-220ENST00000637842 BAZ1AQ9NRL2 1556 aaPredicted RBP18.69■□□□□ 0.58
RBMS3-220ENST00000637842 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
RBMS3-220ENST00000637842 MRC2Q9UBG0 1479 aa18.66■□□□□ 0.58
RBMS3-220ENST00000637842 AEBP2Q6ZN18 517 aaPredicted RBP18.65■□□□□ 0.58
RBMS3-220ENST00000637842 WDR62O43379 1518 aa18.6■□□□□ 0.57
RBMS3-220ENST00000637842 CADPSQ9ULU8 1353 aa18.59■□□□□ 0.57
RBMS3-220ENST00000637842 CHIC1Q5VXU3 224 aa18.56■□□□□ 0.56
RBMS3-220ENST00000637842 TRHP20396 242 aaPredicted RBP18.53■□□□□ 0.56
RBMS3-220ENST00000637842 PEG3Q9GZU2 1588 aa18.52■□□□□ 0.56
RBMS3-220ENST00000637842 RIMBP3CA6NJZ7 1639 aa18.51■□□□□ 0.55
RBMS3-220ENST00000637842 RIMBP3BA6NNM3 1639 aa18.51■□□□□ 0.55
RBMS3-220ENST00000637842 RIMBP3Q9UFD9 1639 aa18.51■□□□□ 0.55
RBMS3-220ENST00000637842 CYB5RLQ6IPT4 315 aa18.46■□□□□ 0.54
RBMS3-220ENST00000637842 CEP164Q9UPV0 1460 aa18.42■□□□□ 0.54
RBMS3-220ENST00000637842 ARHGEF11O15085 1522 aa18.41■□□□□ 0.54
RBMS3-220ENST00000637842 FANCD2Q9BXW9 1451 aa18.33■□□□□ 0.52
RBMS3-220ENST00000637842 MROH2BQ7Z745 1585 aa18.29■□□□□ 0.52
RBMS3-220ENST00000637842 URB2Q14146 1524 aaKnown RBP18.19■□□□□ 0.5
RBMS3-220ENST00000637842 ARAP1Q96P48 1450 aa18.16■□□□□ 0.5
RBMS3-220ENST00000637842 CFTRP13569 1480 aa18.16■□□□□ 0.5
RBMS3-220ENST00000637842 ZNF608Q9ULD9 1512 aaPredicted RBP18.12■□□□□ 0.49
RBMS3-220ENST00000637842 IFT140Q96RY7 1462 aa18.1■□□□□ 0.49
RBMS3-220ENST00000637842 RSF1Q96T23 1441 aaPredicted RBP18.07■□□□□ 0.48
RBMS3-220ENST00000637842 FBLN2P98095 1184 aa18.02■□□□□ 0.48
RBMS3-220ENST00000637842 WIZO95785 1651 aa17.98■□□□□ 0.47
RBMS3-220ENST00000637842 ILDR1Q86SU0 546 aaPredicted RBP17.91■□□□□ 0.46
RBMS3-220ENST00000637842 EIF4G3O43432 1585 aaKnown RBP17.91■□□□□ 0.46
RBMS3-220ENST00000637842 CHD1O14646 1710 aa17.9■□□□□ 0.46
RBMS3-220ENST00000637842 AQRO60306 1485 aaKnown RBP eCLIP17.89■□□□□ 0.45
RBMS3-220ENST00000637842 TOPBP1Q92547 1522 aa17.87■□□□□ 0.45
RBMS3-220ENST00000637842 ABCC8Q09428 1581 aa17.84■□□□□ 0.45
RBMS3-220ENST00000637842 CHMP7Q8WUX9 453 aaPredicted RBP17.76■□□□□ 0.43
RBMS3-220ENST00000637842 CLASP1Q7Z460 1538 aa17.74■□□□□ 0.43
RBMS3-220ENST00000637842 TOP2AP11388 1531 aaKnown RBP17.74■□□□□ 0.43
RBMS3-220ENST00000637842 PRDM2Q13029 1718 aa17.72■□□□□ 0.43
RBMS3-220ENST00000637842 TARBP1Q13395 1621 aaKnown RBP17.72■□□□□ 0.43
RBMS3-220ENST00000637842 DNMBPQ6XZF7 1577 aa17.7■□□□□ 0.42
RBMS3-220ENST00000637842 GAPVD1Q14C86 1478 aa17.69■□□□□ 0.42
RBMS3-220ENST00000637842 SYNJ1O43426 1573 aa17.69■□□□□ 0.42
RBMS3-220ENST00000637842 TDRD9Q8NDG6 1382 aaKnown RBP17.67■□□□□ 0.42
RBMS3-220ENST00000637842 SNAPC4Q5SXM2 1469 aa17.64■□□□□ 0.41
RBMS3-220ENST00000637842 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
RBMS3-220ENST00000637842 SOGA1O94964 1423 aa17.61■□□□□ 0.41
RBMS3-220ENST00000637842 CCDC88BA6NC98 1476 aa17.6■□□□□ 0.41
RBMS3-220ENST00000637842 MAGI1Q96QZ7 1491 aaPredicted RBP17.59■□□□□ 0.41
RBMS3-220ENST00000637842 RAD54L2Q9Y4B4 1467 aa17.59■□□□□ 0.41
RBMS3-220ENST00000637842 KDM4FA0A1W2PPD8 638 aa17.57■□□□□ 0.4
RBMS3-220ENST00000637842 SYNJ2O15056 1496 aa17.55■□□□□ 0.4
RBMS3-220ENST00000637842 GRIN2BQ13224 1484 aa17.52■□□□□ 0.4
RBMS3-220ENST00000637842 WDR97A6NE52 1622 aa17.52■□□□□ 0.39
RBMS3-220ENST00000637842 FAM69CQ0P6D2 419 aa17.43■□□□□ 0.38
RBMS3-220ENST00000637842 FGD5Q6ZNL6 1462 aa17.39■□□□□ 0.38
RBMS3-220ENST00000637842 ERCC6L2Q5T890 1561 aa17.39■□□□□ 0.37
RBMS3-220ENST00000637842 KIF13AQ9H1H9 1805 aa17.39■□□□□ 0.37
RBMS3-220ENST00000637842 NPM1P06748 294 aaKnown RBP eCLIP17.34■□□□□ 0.37
RBMS3-220ENST00000637842 ABCC10Q5T3U5 1492 aa17.33■□□□□ 0.36
RBMS3-220ENST00000637842 CEP170Q5SW79 1584 aa17.31■□□□□ 0.36
RBMS3-220ENST00000637842 KDM6BO15054 1643 aa17.27■□□□□ 0.36
RBMS3-220ENST00000637842 GRIN2AQ12879 1464 aa17.26■□□□□ 0.35
RBMS3-220ENST00000637842 NUP160Q12769 1436 aa17.25■□□□□ 0.35
RBMS3-220ENST00000637842 FBXO41Q8TF61 875 aa17.24■□□□□ 0.35
RBMS3-220ENST00000637842 PBRM1Q86U86 1689 aa17.24■□□□□ 0.35
RBMS3-220ENST00000637842 CUX1P39880 1505 aa17.22■□□□□ 0.35
RBMS3-220ENST00000637842 SHROOM2Q13796 1616 aa17.19■□□□□ 0.34
RBMS3-220ENST00000637842 MAPKBP1O60336 1514 aa17.19■□□□□ 0.34
RBMS3-220ENST00000637842 PRG4Q92954 1404 aaPredicted RBP17.19■□□□□ 0.34
RBMS3-220ENST00000637842 DIP2BQ9P265 1576 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms