RNA–Protein interactions for RNA: ENST00000637803.1

KCNQ2-245, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 5

Gene KCNQ2, Length 160 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-245ENST00000637803 NISCHQ9Y2I1 1504 aa27.95■■■□□ 2.06
KCNQ2-245ENST00000637803 ABCC9O60706 1549 aa26.5■■□□□ 1.83
KCNQ2-245ENST00000637803 DNAJC5BQ9UF47 199 aa25.81■■□□□ 1.72
KCNQ2-245ENST00000637803 CCDC180Q9P1Z9 1646 aa25.36■■□□□ 1.65
KCNQ2-245ENST00000637803 RB1CC1Q8TDY2 1594 aa24.66■■□□□ 1.54
KCNQ2-245ENST00000637803 PABPN1Q86U42 306 aaKnown RBP eCLIP24.63■■□□□ 1.53
KCNQ2-245ENST00000637803 DCAF8L2P0C7V8 631 aa24.28■■□□□ 1.48
KCNQ2-245ENST00000637803 DNAJC5Q9H3Z4 198 aa24.27■■□□□ 1.48
KCNQ2-245ENST00000637803 NACADO15069 1562 aa24.25■■□□□ 1.47
KCNQ2-245ENST00000637803 UNC13AQ9UPW8 1703 aa24.19■■□□□ 1.46
KCNQ2-245ENST00000637803 BICRAQ9NZM4 1560 aa24.04■■□□□ 1.44
KCNQ2-245ENST00000637803 CECR2Q9BXF3 1484 aa23.91■■□□□ 1.42
KCNQ2-245ENST00000637803 CC2D2AQ9P2K1 1620 aa23.82■■□□□ 1.4
KCNQ2-245ENST00000637803 EIF4G1Q04637 1599 aaKnown RBP23.5■■□□□ 1.35
KCNQ2-245ENST00000637803 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
KCNQ2-245ENST00000637803 SHROOM4Q9ULL8 1493 aa23.38■■□□□ 1.33
KCNQ2-245ENST00000637803 SCRIBQ14160 1630 aa23.22■■□□□ 1.31
KCNQ2-245ENST00000637803 CUX2O14529 1486 aa23.05■■□□□ 1.28
KCNQ2-245ENST00000637803 TRIM41Q8WV44 630 aa22.95■■□□□ 1.26
KCNQ2-245ENST00000637803 ZCCHC6Q5VYS8 1495 aaKnown RBP22.91■■□□□ 1.26
KCNQ2-245ENST00000637803 DCAF1Q9Y4B6 1507 aa22.89■■□□□ 1.26
KCNQ2-245ENST00000637803 ERCC6Q03468 1493 aa22.89■■□□□ 1.25
KCNQ2-245ENST00000637803 NESP48681 1621 aa22.52■■□□□ 1.2
KCNQ2-245ENST00000637803 NCAPD3P42695 1498 aa22.43■■□□□ 1.18
KCNQ2-245ENST00000637803 THOC2Q8NI27 1593 aaKnown RBP22.33■■□□□ 1.17
KCNQ2-245ENST00000637803 ATAD2BQ9ULI0 1458 aa22.27■■□□□ 1.16
KCNQ2-245ENST00000637803 SMARCA2P51531 1590 aa22.22■■□□□ 1.15
KCNQ2-245ENST00000637803 KIF21AQ7Z4S6 1674 aa22.14■■□□□ 1.13
KCNQ2-245ENST00000637803 HMGXB3Q12766 1538 aa22.11■■□□□ 1.13
KCNQ2-245ENST00000637803 LAMC3Q9Y6N6 1575 aa22.04■■□□□ 1.12
KCNQ2-245ENST00000637803 OSCARQ8IYS5 282 aa22■■□□□ 1.11
KCNQ2-245ENST00000637803 BAZ1BQ9UIG0 1483 aaKnown RBP21.99■■□□□ 1.11
KCNQ2-245ENST00000637803 SMARCA4P51532 1647 aa21.98■■□□□ 1.11
KCNQ2-245ENST00000637803 PDS5BQ9NTI5 1447 aa21.98■■□□□ 1.11
KCNQ2-245ENST00000637803 BAZ1AQ9NRL2 1556 aaPredicted RBP21.96■■□□□ 1.11
KCNQ2-245ENST00000637803 MRC2Q9UBG0 1479 aa21.85■■□□□ 1.09
KCNQ2-245ENST00000637803 WDR62O43379 1518 aa21.8■■□□□ 1.08
KCNQ2-245ENST00000637803 RIMBP3CA6NJZ7 1639 aa21.77■■□□□ 1.08
KCNQ2-245ENST00000637803 RIMBP3BA6NNM3 1639 aa21.77■■□□□ 1.08
KCNQ2-245ENST00000637803 RIMBP3Q9UFD9 1639 aa21.77■■□□□ 1.08
KCNQ2-245ENST00000637803 CADPSQ9ULU8 1353 aa21.74■■□□□ 1.07
KCNQ2-245ENST00000637803 AEBP2Q6ZN18 517 aaPredicted RBP21.74■■□□□ 1.07
KCNQ2-245ENST00000637803 TRHP20396 242 aaPredicted RBP21.72■■□□□ 1.07
KCNQ2-245ENST00000637803 PEG3Q9GZU2 1588 aa21.69■■□□□ 1.06
KCNQ2-245ENST00000637803 CYB5RLQ6IPT4 315 aa21.65■■□□□ 1.06
KCNQ2-245ENST00000637803 CEP164Q9UPV0 1460 aa21.58■■□□□ 1.05
KCNQ2-245ENST00000637803 MROH2BQ7Z745 1585 aa21.58■■□□□ 1.05
KCNQ2-245ENST00000637803 ARHGEF11O15085 1522 aa21.58■■□□□ 1.04
KCNQ2-245ENST00000637803 FANCD2Q9BXW9 1451 aa21.51■■□□□ 1.03
KCNQ2-245ENST00000637803 URB2Q14146 1524 aaKnown RBP21.41■■□□□ 1.02
KCNQ2-245ENST00000637803 ZNF608Q9ULD9 1512 aaPredicted RBP21.34■■□□□ 1.01
KCNQ2-245ENST00000637803 ARAP1Q96P48 1450 aa21.32■■□□□ 1
KCNQ2-245ENST00000637803 WIZO95785 1651 aa21.31■■□□□ 1
KCNQ2-245ENST00000637803 CFTRP13569 1480 aa21.26■□□□□ 0.99
KCNQ2-245ENST00000637803 FBLN2P98095 1184 aa21.19■□□□□ 0.98
KCNQ2-245ENST00000637803 IFT140Q96RY7 1462 aa21.17■□□□□ 0.98
KCNQ2-245ENST00000637803 CHD1O14646 1710 aa21.15■□□□□ 0.98
KCNQ2-245ENST00000637803 EIF4G3O43432 1585 aaKnown RBP21.08■□□□□ 0.97
KCNQ2-245ENST00000637803 AQRO60306 1485 aaKnown RBP eCLIP21.06■□□□□ 0.96
KCNQ2-245ENST00000637803 RSF1Q96T23 1441 aaPredicted RBP21.05■□□□□ 0.96
KCNQ2-245ENST00000637803 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
KCNQ2-245ENST00000637803 ILDR1Q86SU0 546 aaPredicted RBP20.97■□□□□ 0.95
KCNQ2-245ENST00000637803 PRDM2Q13029 1718 aa20.93■□□□□ 0.94
KCNQ2-245ENST00000637803 TARBP1Q13395 1621 aaKnown RBP20.86■□□□□ 0.93
KCNQ2-245ENST00000637803 TOP2AP11388 1531 aaKnown RBP20.85■□□□□ 0.93
KCNQ2-245ENST00000637803 CLASP1Q7Z460 1538 aa20.82■□□□□ 0.92
KCNQ2-245ENST00000637803 ABCC8Q09428 1581 aa20.8■□□□□ 0.92
KCNQ2-245ENST00000637803 CHMP7Q8WUX9 453 aaPredicted RBP20.8■□□□□ 0.92
KCNQ2-245ENST00000637803 TDRD9Q8NDG6 1382 aaKnown RBP20.79■□□□□ 0.92
KCNQ2-245ENST00000637803 DNMBPQ6XZF7 1577 aa20.78■□□□□ 0.92
KCNQ2-245ENST00000637803 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
KCNQ2-245ENST00000637803 SNAPC4Q5SXM2 1469 aa20.74■□□□□ 0.91
KCNQ2-245ENST00000637803 CCDC88BA6NC98 1476 aa20.73■□□□□ 0.91
KCNQ2-245ENST00000637803 GAPVD1Q14C86 1478 aa20.73■□□□□ 0.91
KCNQ2-245ENST00000637803 SYNJ1O43426 1573 aa20.72■□□□□ 0.91
KCNQ2-245ENST00000637803 POLA1P09884 1462 aaPredicted RBP20.71■□□□□ 0.91
KCNQ2-245ENST00000637803 SOGA1O94964 1423 aa20.66■□□□□ 0.9
KCNQ2-245ENST00000637803 KDM4FA0A1W2PPD8 638 aa20.61■□□□□ 0.89
KCNQ2-245ENST00000637803 MAGI1Q96QZ7 1491 aaPredicted RBP20.56■□□□□ 0.88
KCNQ2-245ENST00000637803 ERCC6L2Q5T890 1561 aa20.55■□□□□ 0.88
KCNQ2-245ENST00000637803 SYNJ2O15056 1496 aa20.54■□□□□ 0.88
KCNQ2-245ENST00000637803 KIF13AQ9H1H9 1805 aa20.53■□□□□ 0.88
KCNQ2-245ENST00000637803 GRIN2BQ13224 1484 aa20.5■□□□□ 0.87
KCNQ2-245ENST00000637803 FGD5Q6ZNL6 1462 aa20.47■□□□□ 0.87
KCNQ2-245ENST00000637803 FAM69CQ0P6D2 419 aa20.42■□□□□ 0.86
KCNQ2-245ENST00000637803 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
KCNQ2-245ENST00000637803 PBRM1Q86U86 1689 aa20.38■□□□□ 0.85
KCNQ2-245ENST00000637803 CEP170Q5SW79 1584 aa20.35■□□□□ 0.85
KCNQ2-245ENST00000637803 CUX1P39880 1505 aa20.32■□□□□ 0.84
KCNQ2-245ENST00000637803 ABCC10Q5T3U5 1492 aa20.26■□□□□ 0.83
KCNQ2-245ENST00000637803 KDM6BO15054 1643 aa20.26■□□□□ 0.83
KCNQ2-245ENST00000637803 GRIN2AQ12879 1464 aa20.25■□□□□ 0.83
KCNQ2-245ENST00000637803 TSPOAP1O95153 1857 aa20.23■□□□□ 0.83
KCNQ2-245ENST00000637803 NPM1P06748 294 aaKnown RBP eCLIP20.22■□□□□ 0.83
KCNQ2-245ENST00000637803 SHROOM2Q13796 1616 aa20.2■□□□□ 0.82
KCNQ2-245ENST00000637803 NUP160Q12769 1436 aa20.19■□□□□ 0.82
KCNQ2-245ENST00000637803 ABCA5Q8WWZ7 1642 aa20.17■□□□□ 0.82
KCNQ2-245ENST00000637803 PRG4Q92954 1404 aaPredicted RBP20.17■□□□□ 0.82
KCNQ2-245ENST00000637803 DIP2BQ9P265 1576 aa20.17■□□□□ 0.82
KCNQ2-245ENST00000637803 HECW2Q9P2P5 1572 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms