RNA–Protein interactions for RNA: ENST00000637383.1

SMARCA2-262, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-262ENST00000637383 NISCHQ9Y2I1 1504 aa19.24■□□□□ 0.67
SMARCA2-262ENST00000637383 CCDC180Q9P1Z9 1646 aa17.12■□□□□ 0.33
SMARCA2-262ENST00000637383 ABCC9O60706 1549 aa17.06■□□□□ 0.32
SMARCA2-262ENST00000637383 AEBP2Q6ZN18 517 aaPredicted RBP16.53■□□□□ 0.24
SMARCA2-262ENST00000637383 RB1CC1Q8TDY2 1594 aa16.26■□□□□ 0.19
SMARCA2-262ENST00000637383 CHIC1Q5VXU3 224 aa16.25■□□□□ 0.19
SMARCA2-262ENST00000637383 DCAF8L2P0C7V8 631 aa16.23■□□□□ 0.19
SMARCA2-262ENST00000637383 NACADO15069 1562 aa16.21■□□□□ 0.18
SMARCA2-262ENST00000637383 MYO15BQ96JP2 1530 aa16.05■□□□□ 0.16
SMARCA2-262ENST00000637383 ZCCHC6Q5VYS8 1495 aaKnown RBP15.97■□□□□ 0.15
SMARCA2-262ENST00000637383 PABPN1Q86U42 306 aaKnown RBP eCLIP15.96■□□□□ 0.15
SMARCA2-262ENST00000637383 DNAJC5BQ9UF47 199 aa15.93■□□□□ 0.14
SMARCA2-262ENST00000637383 DCAF1Q9Y4B6 1507 aa15.89■□□□□ 0.13
SMARCA2-262ENST00000637383 UNC13AQ9UPW8 1703 aa15.82■□□□□ 0.12
SMARCA2-262ENST00000637383 BICRAQ9NZM4 1560 aa15.79■□□□□ 0.12
SMARCA2-262ENST00000637383 SCRIBQ14160 1630 aa15.64■□□□□ 0.09
SMARCA2-262ENST00000637383 SHROOM4Q9ULL8 1493 aa15.6■□□□□ 0.09
SMARCA2-262ENST00000637383 EIF4G1Q04637 1599 aaKnown RBP15.4■□□□□ 0.06
SMARCA2-262ENST00000637383 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
SMARCA2-262ENST00000637383 CECR2Q9BXF3 1484 aa15.36■□□□□ 0.05
SMARCA2-262ENST00000637383 NCAPD3P42695 1498 aa15.01□□□□□ -0.01
SMARCA2-262ENST00000637383 ATAD2BQ9ULI0 1458 aa14.96□□□□□ -0.01
SMARCA2-262ENST00000637383 SMARCA4P51532 1647 aa14.94□□□□□ -0.02
SMARCA2-262ENST00000637383 SMARCA2P51531 1590 aa14.9□□□□□ -0.02
SMARCA2-262ENST00000637383 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
SMARCA2-262ENST00000637383 HMGXB3Q12766 1538 aa14.86□□□□□ -0.03
SMARCA2-262ENST00000637383 MROH2BQ7Z745 1585 aa14.83□□□□□ -0.04
SMARCA2-262ENST00000637383 BAZ1BQ9UIG0 1483 aaKnown RBP14.81□□□□□ -0.04
SMARCA2-262ENST00000637383 PEG3Q9GZU2 1588 aa14.81□□□□□ -0.04
SMARCA2-262ENST00000637383 ERCC6Q03468 1493 aa14.71□□□□□ -0.05
SMARCA2-262ENST00000637383 NESP48681 1621 aa14.7□□□□□ -0.06
SMARCA2-262ENST00000637383 CUX2O14529 1486 aa14.63□□□□□ -0.07
SMARCA2-262ENST00000637383 WIZO95785 1651 aa14.61□□□□□ -0.07
SMARCA2-262ENST00000637383 RSF1Q96T23 1441 aaPredicted RBP14.6□□□□□ -0.07
SMARCA2-262ENST00000637383 LAMC3Q9Y6N6 1575 aa14.58□□□□□ -0.08
SMARCA2-262ENST00000637383 CADPSQ9ULU8 1353 aa14.57□□□□□ -0.08
SMARCA2-262ENST00000637383 PDS5BQ9NTI5 1447 aa14.54□□□□□ -0.08
SMARCA2-262ENST00000637383 DNAJC5Q9H3Z4 198 aa14.52□□□□□ -0.09
SMARCA2-262ENST00000637383 THOC2Q8NI27 1593 aaKnown RBP14.47□□□□□ -0.09
SMARCA2-262ENST00000637383 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.1
SMARCA2-262ENST00000637383 KIF21AQ7Z4S6 1674 aa14.42□□□□□ -0.1
SMARCA2-262ENST00000637383 CFTRP13569 1480 aa14.42□□□□□ -0.1
SMARCA2-262ENST00000637383 MRC2Q9UBG0 1479 aa14.38□□□□□ -0.11
SMARCA2-262ENST00000637383 FANCD2Q9BXW9 1451 aa14.37□□□□□ -0.11
SMARCA2-262ENST00000637383 CEP164Q9UPV0 1460 aa14.36□□□□□ -0.11
SMARCA2-262ENST00000637383 CCDC88BA6NC98 1476 aa14.33□□□□□ -0.12
SMARCA2-262ENST00000637383 WDR62O43379 1518 aa14.33□□□□□ -0.12
SMARCA2-262ENST00000637383 PHF23Q9BUL5 403 aaPredicted RBP14.26□□□□□ -0.13
SMARCA2-262ENST00000637383 URB2Q14146 1524 aaKnown RBP14.24□□□□□ -0.13
SMARCA2-262ENST00000637383 PRDM2Q13029 1718 aa14.13□□□□□ -0.15
SMARCA2-262ENST00000637383 TOPBP1Q92547 1522 aa14.1□□□□□ -0.15
SMARCA2-262ENST00000637383 SUPT5HO00267 1087 aaKnown RBP14.09□□□□□ -0.15
SMARCA2-262ENST00000637383 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
SMARCA2-262ENST00000637383 IFT140Q96RY7 1462 aa14.08□□□□□ -0.16
SMARCA2-262ENST00000637383 SENP3Q9H4L4 574 aaPredicted RBP14.07□□□□□ -0.16
SMARCA2-262ENST00000637383 OSCARQ8IYS5 282 aa14.05□□□□□ -0.16
SMARCA2-262ENST00000637383 ZNF608Q9ULD9 1512 aaPredicted RBP14.05□□□□□ -0.16
SMARCA2-262ENST00000637383 DNMBPQ6XZF7 1577 aa14.04□□□□□ -0.16
SMARCA2-262ENST00000637383 POLA1P09884 1462 aaPredicted RBP13.98□□□□□ -0.17
SMARCA2-262ENST00000637383 AQRO60306 1485 aaKnown RBP eCLIP13.96□□□□□ -0.17
SMARCA2-262ENST00000637383 TARBP1Q13395 1621 aaKnown RBP13.94□□□□□ -0.18
SMARCA2-262ENST00000637383 SOGA1O94964 1423 aa13.94□□□□□ -0.18
SMARCA2-262ENST00000637383 RAD54L2Q9Y4B4 1467 aa13.93□□□□□ -0.18
SMARCA2-262ENST00000637383 TRIM41Q8WV44 630 aa13.92□□□□□ -0.18
SMARCA2-262ENST00000637383 EIF4G3O43432 1585 aaKnown RBP13.92□□□□□ -0.18
SMARCA2-262ENST00000637383 CUX1P39880 1505 aa13.91□□□□□ -0.18
SMARCA2-262ENST00000637383 TDRD9Q8NDG6 1382 aaKnown RBP13.91□□□□□ -0.18
SMARCA2-262ENST00000637383 FGD5Q6ZNL6 1462 aa13.9□□□□□ -0.18
SMARCA2-262ENST00000637383 FBLN2P98095 1184 aa13.85□□□□□ -0.19
SMARCA2-262ENST00000637383 WDR97A6NE52 1622 aa13.79□□□□□ -0.2
SMARCA2-262ENST00000637383 GRIN2BQ13224 1484 aa13.79□□□□□ -0.2
SMARCA2-262ENST00000637383 SNAPC4Q5SXM2 1469 aa13.79□□□□□ -0.2
SMARCA2-262ENST00000637383 CHMP7Q8WUX9 453 aaPredicted RBP13.77□□□□□ -0.21
SMARCA2-262ENST00000637383 ARHGEF11O15085 1522 aa13.76□□□□□ -0.21
SMARCA2-262ENST00000637383 ABCA10Q8WWZ4 1543 aa13.76□□□□□ -0.21
SMARCA2-262ENST00000637383 GAPVD1Q14C86 1478 aa13.76□□□□□ -0.21
SMARCA2-262ENST00000637383 MAGI1Q96QZ7 1491 aaPredicted RBP13.76□□□□□ -0.21
SMARCA2-262ENST00000637383 WRNQ14191 1432 aaPredicted RBP eCLIP13.76□□□□□ -0.21
SMARCA2-262ENST00000637383 RIMBP3CA6NJZ7 1639 aa13.75□□□□□ -0.21
SMARCA2-262ENST00000637383 RIMBP3BA6NNM3 1639 aa13.75□□□□□ -0.21
SMARCA2-262ENST00000637383 RIMBP3Q9UFD9 1639 aa13.75□□□□□ -0.21
SMARCA2-262ENST00000637383 CHD1O14646 1710 aa13.75□□□□□ -0.21
SMARCA2-262ENST00000637383 SYNJ2O15056 1496 aa13.72□□□□□ -0.21
SMARCA2-262ENST00000637383 CYB5RLQ6IPT4 315 aa13.71□□□□□ -0.21
SMARCA2-262ENST00000637383 TOP2BQ02880 1626 aa13.71□□□□□ -0.22
SMARCA2-262ENST00000637383 SYNJ1O43426 1573 aa13.69□□□□□ -0.22
SMARCA2-262ENST00000637383 ABCA5Q8WWZ7 1642 aa13.68□□□□□ -0.22
SMARCA2-262ENST00000637383 BIVM-ERCC5R4GMW8 1640 aa13.68□□□□□ -0.22
SMARCA2-262ENST00000637383 CLASP1Q7Z460 1538 aa13.65□□□□□ -0.22
SMARCA2-262ENST00000637383 ARAP1Q96P48 1450 aa13.65□□□□□ -0.22
SMARCA2-262ENST00000637383 PBRM1Q86U86 1689 aa13.64□□□□□ -0.23
SMARCA2-262ENST00000637383 GRIN2AQ12879 1464 aa13.6□□□□□ -0.23
SMARCA2-262ENST00000637383 FHAD1B1AJZ9 1412 aa13.59□□□□□ -0.23
SMARCA2-262ENST00000637383 ERICH3Q5RHP9 1530 aa13.58□□□□□ -0.24
SMARCA2-262ENST00000637383 ADAMTS12P58397 1594 aa13.57□□□□□ -0.24
SMARCA2-262ENST00000637383 NUP160Q12769 1436 aa13.56□□□□□ -0.24
SMARCA2-262ENST00000637383 CEP170Q5SW79 1584 aa13.52□□□□□ -0.25
SMARCA2-262ENST00000637383 IGF1RP08069 1367 aa13.5□□□□□ -0.25
SMARCA2-262ENST00000637383 KIF27Q86VH2 1401 aa13.49□□□□□ -0.25
SMARCA2-262ENST00000637383 TRHP20396 242 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms