RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 NISCHQ9Y2I1 1504 aa35.49■■■■□ 3.27
CACNA1A-231ENST00000636816 CCDC180Q9P1Z9 1646 aa30.74■■■□□ 2.51
CACNA1A-231ENST00000636816 ZCCHC6Q5VYS8 1495 aaKnown RBP29.82■■■□□ 2.36
CACNA1A-231ENST00000636816 DCAF8L2P0C7V8 631 aa29.47■■■□□ 2.31
CACNA1A-231ENST00000636816 SHROOM4Q9ULL8 1493 aa29.31■■■□□ 2.28
CACNA1A-231ENST00000636816 DCAF1Q9Y4B6 1507 aa29.22■■■□□ 2.27
CACNA1A-231ENST00000636816 ABCC9O60706 1549 aa29.12■■■□□ 2.25
CACNA1A-231ENST00000636816 MYO15BQ96JP2 1530 aa28.76■■■□□ 2.19
CACNA1A-231ENST00000636816 NACADO15069 1562 aa28.61■■■□□ 2.17
CACNA1A-231ENST00000636816 SCRIBQ14160 1630 aa28.48■■■□□ 2.15
CACNA1A-231ENST00000636816 RB1CC1Q8TDY2 1594 aa28.34■■■□□ 2.13
CACNA1A-231ENST00000636816 SUPT5HO00267 1087 aaKnown RBP28.29■■■□□ 2.12
CACNA1A-231ENST00000636816 UNC13AQ9UPW8 1703 aa27.91■■■□□ 2.06
CACNA1A-231ENST00000636816 CECR2Q9BXF3 1484 aa27.68■■■□□ 2.02
CACNA1A-231ENST00000636816 RSF1Q96T23 1441 aaPredicted RBP27.66■■■□□ 2.02
CACNA1A-231ENST00000636816 PABPN1Q86U42 306 aaKnown RBP eCLIP27.59■■■□□ 2.01
CACNA1A-231ENST00000636816 BICRAQ9NZM4 1560 aa27.58■■■□□ 2.01
CACNA1A-231ENST00000636816 MROH2BQ7Z745 1585 aa27.5■■□□□ 1.99
CACNA1A-231ENST00000636816 BAZ1AQ9NRL2 1556 aaPredicted RBP27.34■■□□□ 1.97
CACNA1A-231ENST00000636816 WIZO95785 1651 aa27.31■■□□□ 1.96
CACNA1A-231ENST00000636816 SMARCA4P51532 1647 aa27.24■■□□□ 1.95
CACNA1A-231ENST00000636816 CHIC1Q5VXU3 224 aa27.12■■□□□ 1.93
CACNA1A-231ENST00000636816 TOP2AP11388 1531 aaKnown RBP26.91■■□□□ 1.9
CACNA1A-231ENST00000636816 PEG3Q9GZU2 1588 aa26.83■■□□□ 1.88
CACNA1A-231ENST00000636816 ATAD2BQ9ULI0 1458 aa26.76■■□□□ 1.87
CACNA1A-231ENST00000636816 CCDC88BA6NC98 1476 aa26.73■■□□□ 1.87
CACNA1A-231ENST00000636816 SMARCA2P51531 1590 aa26.72■■□□□ 1.87
CACNA1A-231ENST00000636816 EIF4G1Q04637 1599 aaKnown RBP26.71■■□□□ 1.87
CACNA1A-231ENST00000636816 BAZ1BQ9UIG0 1483 aaKnown RBP26.6■■□□□ 1.85
CACNA1A-231ENST00000636816 TRIM41Q8WV44 630 aa26.49■■□□□ 1.83
CACNA1A-231ENST00000636816 NCAPD3P42695 1498 aa26.45■■□□□ 1.82
CACNA1A-231ENST00000636816 HMGXB3Q12766 1538 aa26.38■■□□□ 1.81
CACNA1A-231ENST00000636816 CC2D2AQ9P2K1 1620 aa26.29■■□□□ 1.8
CACNA1A-231ENST00000636816 ABCC8Q09428 1581 aa26.29■■□□□ 1.8
CACNA1A-231ENST00000636816 LOC105371045A0A1W2PR82 267 aa26.22■■□□□ 1.79
CACNA1A-231ENST00000636816 FAM9AQ8IZU1 332 aaPredicted RBP26.15■■□□□ 1.78
CACNA1A-231ENST00000636816 WRNQ14191 1432 aaPredicted RBP eCLIP25.99■■□□□ 1.75
CACNA1A-231ENST00000636816 CFTRP13569 1480 aa25.94■■□□□ 1.74
CACNA1A-231ENST00000636816 SYNJ1O43426 1573 aa25.93■■□□□ 1.74
CACNA1A-231ENST00000636816 EHMT2Q96KQ7 1210 aa25.87■■□□□ 1.73
CACNA1A-231ENST00000636816 SOGA1O94964 1423 aa25.84■■□□□ 1.73
CACNA1A-231ENST00000636816 CADPSQ9ULU8 1353 aa25.82■■□□□ 1.72
CACNA1A-231ENST00000636816 DNAJC5BQ9UF47 199 aa25.8■■□□□ 1.72
CACNA1A-231ENST00000636816 RUSC2Q8N2Y8 1516 aa25.78■■□□□ 1.72
CACNA1A-231ENST00000636816 PRDM2Q13029 1718 aa25.77■■□□□ 1.72
CACNA1A-231ENST00000636816 TOP2BQ02880 1626 aa25.73■■□□□ 1.71
CACNA1A-231ENST00000636816 BIVM-ERCC5R4GMW8 1640 aa25.69■■□□□ 1.7
CACNA1A-231ENST00000636816 CUX1P39880 1505 aa25.68■■□□□ 1.7
CACNA1A-231ENST00000636816 NESP48681 1621 aa25.66■■□□□ 1.7
CACNA1A-231ENST00000636816 CSRNP3Q8WYN3 585 aa25.62■■□□□ 1.69
CACNA1A-231ENST00000636816 EEA1Q15075 1411 aa25.61■■□□□ 1.69
CACNA1A-231ENST00000636816 FANCD2Q9BXW9 1451 aa25.55■■□□□ 1.68
CACNA1A-231ENST00000636816 LAMC3Q9Y6N6 1575 aa25.49■■□□□ 1.67
CACNA1A-231ENST00000636816 FGD5Q6ZNL6 1462 aa25.36■■□□□ 1.65
CACNA1A-231ENST00000636816 UBTFP17480 764 aaKnown RBP25.35■■□□□ 1.65
CACNA1A-231ENST00000636816 GOLGA3Q08378 1498 aa25.35■■□□□ 1.65
CACNA1A-231ENST00000636816 CEP164Q9UPV0 1460 aa25.33■■□□□ 1.65
CACNA1A-231ENST00000636816 KIF21BO75037 1637 aa25.33■■□□□ 1.65
CACNA1A-231ENST00000636816 TNIKQ9UKE5 1360 aa25.33■■□□□ 1.65
CACNA1A-231ENST00000636816 DNMBPQ6XZF7 1577 aa25.31■■□□□ 1.64
CACNA1A-231ENST00000636816 PDS5BQ9NTI5 1447 aa25.31■■□□□ 1.64
CACNA1A-231ENST00000636816 TOPBP1Q92547 1522 aa25.3■■□□□ 1.64
CACNA1A-231ENST00000636816 KIF27Q86VH2 1401 aa25.29■■□□□ 1.64
CACNA1A-231ENST00000636816 KIF21AQ7Z4S6 1674 aa25.28■■□□□ 1.64
CACNA1A-231ENST00000636816 RAPGEF2Q9Y4G8 1499 aa25.27■■□□□ 1.64
CACNA1A-231ENST00000636816 URB2Q14146 1524 aaKnown RBP25.25■■□□□ 1.63
CACNA1A-231ENST00000636816 CEP162Q5TB80 1403 aa25.25■■□□□ 1.63
CACNA1A-231ENST00000636816 CUX2O14529 1486 aa25.24■■□□□ 1.63
CACNA1A-231ENST00000636816 POLA1P09884 1462 aaPredicted RBP25.2■■□□□ 1.62
CACNA1A-231ENST00000636816 RAD54L2Q9Y4B4 1467 aa25.2■■□□□ 1.62
CACNA1A-231ENST00000636816 PRXQ9BXM0 1461 aa25.19■■□□□ 1.62
CACNA1A-231ENST00000636816 PCGF6Q9BYE7 350 aa25.16■■□□□ 1.62
CACNA1A-231ENST00000636816 IGF1RP08069 1367 aa25.12■■□□□ 1.61
CACNA1A-231ENST00000636816 ERICH3Q5RHP9 1530 aa25.1■■□□□ 1.61
CACNA1A-231ENST00000636816 ABCA10Q8WWZ4 1543 aa25.08■■□□□ 1.6
CACNA1A-231ENST00000636816 PPARGC1BQ86YN6 1023 aaKnown RBP25.03■■□□□ 1.6
CACNA1A-231ENST00000636816 RANGAP1P46060 587 aaPredicted RBP25.02■■□□□ 1.6
CACNA1A-231ENST00000636816 TRIM26Q12899 539 aaPredicted RBP25■■□□□ 1.59
CACNA1A-231ENST00000636816 CLIP1P30622 1438 aa25■■□□□ 1.59
CACNA1A-231ENST00000636816 MRC2Q9UBG0 1479 aa24.99■■□□□ 1.59
CACNA1A-231ENST00000636816 WDR97A6NE52 1622 aa24.99■■□□□ 1.59
CACNA1A-231ENST00000636816 CARMIL1Q5VZK9 1371 aa24.97■■□□□ 1.59
CACNA1A-231ENST00000636816 TDRD9Q8NDG6 1382 aaKnown RBP24.94■■□□□ 1.58
CACNA1A-231ENST00000636816 TARBP1Q13395 1621 aaKnown RBP24.9■■□□□ 1.58
CACNA1A-231ENST00000636816 ERCC6Q03468 1493 aa24.87■■□□□ 1.57
CACNA1A-231ENST00000636816 ABCA5Q8WWZ7 1642 aa24.87■■□□□ 1.57
CACNA1A-231ENST00000636816 WDR62O43379 1518 aa24.83■■□□□ 1.57
CACNA1A-231ENST00000636816 GAPVD1Q14C86 1478 aa24.83■■□□□ 1.57
CACNA1A-231ENST00000636816 CUL7Q14999 1698 aa24.79■■□□□ 1.56
CACNA1A-231ENST00000636816 VPS8Q8N3P4 1428 aa24.77■■□□□ 1.56
CACNA1A-231ENST00000636816 TTBK1Q5TCY1 1321 aaPredicted RBP24.77■■□□□ 1.56
CACNA1A-231ENST00000636816 THOC2Q8NI27 1593 aaKnown RBP24.75■■□□□ 1.55
CACNA1A-231ENST00000636816 ARAP1Q96P48 1450 aa24.75■■□□□ 1.55
CACNA1A-231ENST00000636816 AQRO60306 1485 aaKnown RBP eCLIP24.74■■□□□ 1.55
CACNA1A-231ENST00000636816 ARHGAP35Q9NRY4 1499 aa24.71■■□□□ 1.55
CACNA1A-231ENST00000636816 IFT140Q96RY7 1462 aa24.69■■□□□ 1.54
CACNA1A-231ENST00000636816 ZNF608Q9ULD9 1512 aaPredicted RBP24.69■■□□□ 1.54
CACNA1A-231ENST00000636816 PBRM1Q86U86 1689 aa24.68■■□□□ 1.54
CACNA1A-231ENST00000636816 CTTNBP2Q8WZ74 1663 aa24.59■■□□□ 1.53
CACNA1A-231ENST00000636816 GRIN2BQ13224 1484 aa24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms