RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 NISCHQ9Y2I1 1504 aa39.31■■■■□ 3.88
CACNA1A-229ENST00000636670 ABCC9O60706 1549 aa36.7■■■■□ 3.47
CACNA1A-229ENST00000636670 CCDC180Q9P1Z9 1646 aa35.68■■■■□ 3.3
CACNA1A-229ENST00000636670 DNAJC5BQ9UF47 199 aa35.39■■■■□ 3.26
CACNA1A-229ENST00000636670 RB1CC1Q8TDY2 1594 aa34.49■■■■□ 3.11
CACNA1A-229ENST00000636670 PABPN1Q86U42 306 aaKnown RBP eCLIP34.05■■■■□ 3.04
CACNA1A-229ENST00000636670 NACADO15069 1562 aa34.03■■■■□ 3.04
CACNA1A-229ENST00000636670 DCAF8L2P0C7V8 631 aa33.68■■■□□ 2.98
CACNA1A-229ENST00000636670 UNC13AQ9UPW8 1703 aa33.62■■■□□ 2.97
CACNA1A-229ENST00000636670 BICRAQ9NZM4 1560 aa33.5■■■□□ 2.95
CACNA1A-229ENST00000636670 DNAJC5Q9H3Z4 198 aa33.31■■■□□ 2.92
CACNA1A-229ENST00000636670 MYO15BQ96JP2 1530 aa33.25■■■□□ 2.91
CACNA1A-229ENST00000636670 CECR2Q9BXF3 1484 aa33.2■■■□□ 2.91
CACNA1A-229ENST00000636670 CC2D2AQ9P2K1 1620 aa33.1■■■□□ 2.89
CACNA1A-229ENST00000636670 SHROOM4Q9ULL8 1493 aa33■■■□□ 2.87
CACNA1A-229ENST00000636670 ZCCHC6Q5VYS8 1495 aaKnown RBP32.84■■■□□ 2.85
CACNA1A-229ENST00000636670 EIF4G1Q04637 1599 aaKnown RBP32.79■■■□□ 2.84
CACNA1A-229ENST00000636670 DCAF1Q9Y4B6 1507 aa32.63■■■□□ 2.81
CACNA1A-229ENST00000636670 SCRIBQ14160 1630 aa32.41■■■□□ 2.78
CACNA1A-229ENST00000636670 CUX2O14529 1486 aa32.1■■■□□ 2.73
CACNA1A-229ENST00000636670 ERCC6Q03468 1493 aa31.79■■■□□ 2.68
CACNA1A-229ENST00000636670 NCAPD3P42695 1498 aa31.46■■■□□ 2.63
CACNA1A-229ENST00000636670 TRIM41Q8WV44 630 aa31.37■■■□□ 2.61
CACNA1A-229ENST00000636670 NESP48681 1621 aa31.22■■■□□ 2.59
CACNA1A-229ENST00000636670 ATAD2BQ9ULI0 1458 aa31.18■■■□□ 2.58
CACNA1A-229ENST00000636670 THOC2Q8NI27 1593 aaKnown RBP31.09■■■□□ 2.57
CACNA1A-229ENST00000636670 HMGXB3Q12766 1538 aa31.08■■■□□ 2.57
CACNA1A-229ENST00000636670 SMARCA2P51531 1590 aa31.04■■■□□ 2.56
CACNA1A-229ENST00000636670 LAMC3Q9Y6N6 1575 aa30.88■■■□□ 2.53
CACNA1A-229ENST00000636670 SMARCA4P51532 1647 aa30.85■■■□□ 2.53
CACNA1A-229ENST00000636670 BAZ1BQ9UIG0 1483 aaKnown RBP30.82■■■□□ 2.52
CACNA1A-229ENST00000636670 PDS5BQ9NTI5 1447 aa30.78■■■□□ 2.52
CACNA1A-229ENST00000636670 KIF21AQ7Z4S6 1674 aa30.74■■■□□ 2.51
CACNA1A-229ENST00000636670 PEG3Q9GZU2 1588 aa30.58■■■□□ 2.49
CACNA1A-229ENST00000636670 BAZ1AQ9NRL2 1556 aaPredicted RBP30.58■■■□□ 2.49
CACNA1A-229ENST00000636670 OSCARQ8IYS5 282 aa30.53■■■□□ 2.48
CACNA1A-229ENST00000636670 MRC2Q9UBG0 1479 aa30.52■■■□□ 2.48
CACNA1A-229ENST00000636670 WDR62O43379 1518 aa30.47■■■□□ 2.47
CACNA1A-229ENST00000636670 CADPSQ9ULU8 1353 aa30.45■■■□□ 2.47
CACNA1A-229ENST00000636670 MROH2BQ7Z745 1585 aa30.27■■■□□ 2.44
CACNA1A-229ENST00000636670 CEP164Q9UPV0 1460 aa30.19■■■□□ 2.42
CACNA1A-229ENST00000636670 RIMBP3CA6NJZ7 1639 aa30.12■■■□□ 2.41
CACNA1A-229ENST00000636670 RIMBP3BA6NNM3 1639 aa30.12■■■□□ 2.41
CACNA1A-229ENST00000636670 RIMBP3Q9UFD9 1639 aa30.12■■■□□ 2.41
CACNA1A-229ENST00000636670 FANCD2Q9BXW9 1451 aa30.06■■■□□ 2.4
CACNA1A-229ENST00000636670 WIZO95785 1651 aa30.01■■■□□ 2.4
CACNA1A-229ENST00000636670 ARHGEF11O15085 1522 aa29.95■■■□□ 2.38
CACNA1A-229ENST00000636670 RSF1Q96T23 1441 aaPredicted RBP29.91■■■□□ 2.38
CACNA1A-229ENST00000636670 CFTRP13569 1480 aa29.87■■■□□ 2.37
CACNA1A-229ENST00000636670 URB2Q14146 1524 aaKnown RBP29.86■■■□□ 2.37
CACNA1A-229ENST00000636670 TRHP20396 242 aaPredicted RBP29.86■■■□□ 2.37
CACNA1A-229ENST00000636670 CYB5RLQ6IPT4 315 aa29.86■■■□□ 2.37
CACNA1A-229ENST00000636670 AEBP2Q6ZN18 517 aaPredicted RBP29.77■■■□□ 2.36
CACNA1A-229ENST00000636670 TOP2AP11388 1531 aaKnown RBP29.74■■■□□ 2.35
CACNA1A-229ENST00000636670 ZNF608Q9ULD9 1512 aaPredicted RBP29.66■■■□□ 2.34
CACNA1A-229ENST00000636670 IFT140Q96RY7 1462 aa29.65■■■□□ 2.34
CACNA1A-229ENST00000636670 ARAP1Q96P48 1450 aa29.56■■■□□ 2.32
CACNA1A-229ENST00000636670 EIF4G3O43432 1585 aaKnown RBP29.42■■■□□ 2.3
CACNA1A-229ENST00000636670 CHD1O14646 1710 aa29.38■■■□□ 2.29
CACNA1A-229ENST00000636670 PRDM2Q13029 1718 aa29.38■■■□□ 2.29
CACNA1A-229ENST00000636670 TOPBP1Q92547 1522 aa29.37■■■□□ 2.29
CACNA1A-229ENST00000636670 FBLN2P98095 1184 aa29.35■■■□□ 2.29
CACNA1A-229ENST00000636670 ABCC8Q09428 1581 aa29.3■■■□□ 2.28
CACNA1A-229ENST00000636670 AQRO60306 1485 aaKnown RBP eCLIP29.29■■■□□ 2.28
CACNA1A-229ENST00000636670 CCDC88BA6NC98 1476 aa29.25■■■□□ 2.27
CACNA1A-229ENST00000636670 TARBP1Q13395 1621 aaKnown RBP29.17■■■□□ 2.26
CACNA1A-229ENST00000636670 DNMBPQ6XZF7 1577 aa29.17■■■□□ 2.26
CACNA1A-229ENST00000636670 CLASP1Q7Z460 1538 aa29.06■■■□□ 2.24
CACNA1A-229ENST00000636670 SUPT5HO00267 1087 aaKnown RBP29.05■■■□□ 2.24
CACNA1A-229ENST00000636670 POLA1P09884 1462 aaPredicted RBP29.01■■■□□ 2.23
CACNA1A-229ENST00000636670 CHMP7Q8WUX9 453 aaPredicted RBP28.99■■■□□ 2.23
CACNA1A-229ENST00000636670 SYNJ1O43426 1573 aa28.97■■■□□ 2.23
CACNA1A-229ENST00000636670 TDRD9Q8NDG6 1382 aaKnown RBP28.97■■■□□ 2.23
CACNA1A-229ENST00000636670 SNAPC4Q5SXM2 1469 aa28.94■■■□□ 2.22
CACNA1A-229ENST00000636670 RAD54L2Q9Y4B4 1467 aa28.92■■■□□ 2.22
CACNA1A-229ENST00000636670 SOGA1O94964 1423 aa28.9■■■□□ 2.22
CACNA1A-229ENST00000636670 GAPVD1Q14C86 1478 aa28.87■■■□□ 2.21
CACNA1A-229ENST00000636670 MAGI1Q96QZ7 1491 aaPredicted RBP28.85■■■□□ 2.21
CACNA1A-229ENST00000636670 WDR97A6NE52 1622 aa28.84■■■□□ 2.21
CACNA1A-229ENST00000636670 SYNJ2O15056 1496 aa28.78■■■□□ 2.2
CACNA1A-229ENST00000636670 GRIN2BQ13224 1484 aa28.75■■■□□ 2.19
CACNA1A-229ENST00000636670 FGD5Q6ZNL6 1462 aa28.67■■■□□ 2.18
CACNA1A-229ENST00000636670 ILDR1Q86SU0 546 aaPredicted RBP28.58■■■□□ 2.17
CACNA1A-229ENST00000636670 ERCC6L2Q5T890 1561 aa28.51■■■□□ 2.15
CACNA1A-229ENST00000636670 PBRM1Q86U86 1689 aa28.48■■■□□ 2.15
CACNA1A-229ENST00000636670 CUX1P39880 1505 aa28.46■■■□□ 2.15
CACNA1A-229ENST00000636670 KIF13AQ9H1H9 1805 aa28.46■■■□□ 2.15
CACNA1A-229ENST00000636670 CEP170Q5SW79 1584 aa28.4■■■□□ 2.14
CACNA1A-229ENST00000636670 KDM4FA0A1W2PPD8 638 aa28.38■■■□□ 2.13
CACNA1A-229ENST00000636670 GRIN2AQ12879 1464 aa28.37■■■□□ 2.13
CACNA1A-229ENST00000636670 BIVM-ERCC5R4GMW8 1640 aa28.34■■■□□ 2.13
CACNA1A-229ENST00000636670 NUP160Q12769 1436 aa28.32■■■□□ 2.12
CACNA1A-229ENST00000636670 ABCA5Q8WWZ7 1642 aa28.32■■■□□ 2.12
CACNA1A-229ENST00000636670 FAM69CQ0P6D2 419 aa28.31■■■□□ 2.12
CACNA1A-229ENST00000636670 ABCA10Q8WWZ4 1543 aa28.31■■■□□ 2.12
CACNA1A-229ENST00000636670 TOP2BQ02880 1626 aa28.28■■■□□ 2.12
CACNA1A-229ENST00000636670 SHROOM2Q13796 1616 aa28.28■■■□□ 2.12
CACNA1A-229ENST00000636670 ABCC10Q5T3U5 1492 aa28.25■■■□□ 2.11
CACNA1A-229ENST00000636670 WRNQ14191 1432 aaPredicted RBP eCLIP28.24■■■□□ 2.11
CACNA1A-229ENST00000636670 NPM1P06748 294 aaKnown RBP eCLIP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms