RNA–Protein interactions for RNA: ENST00000636639.1

ATP6AP2-218, Transcript of ATPase H+ transporting accessory protein 2, humanhuman

TSL 1 (best)

Gene ATP6AP2, Length 2,125 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP2-218ENST00000636639 NISCHQ9Y2I1 1504 aa38.94■■■■□ 3.82
ATP6AP2-218ENST00000636639 CCDC180Q9P1Z9 1646 aa33.84■■■■□ 3.01
ATP6AP2-218ENST00000636639 ZCCHC6Q5VYS8 1495 aaKnown RBP32.72■■■□□ 2.83
ATP6AP2-218ENST00000636639 DCAF8L2P0C7V8 631 aa32.39■■■□□ 2.78
ATP6AP2-218ENST00000636639 DCAF1Q9Y4B6 1507 aa32.1■■■□□ 2.73
ATP6AP2-218ENST00000636639 ABCC9O60706 1549 aa32.07■■■□□ 2.73
ATP6AP2-218ENST00000636639 SHROOM4Q9ULL8 1493 aa32.07■■■□□ 2.72
ATP6AP2-218ENST00000636639 MYO15BQ96JP2 1530 aa31.65■■■□□ 2.66
ATP6AP2-218ENST00000636639 NACADO15069 1562 aa31.52■■■□□ 2.64
ATP6AP2-218ENST00000636639 SCRIBQ14160 1630 aa31.29■■■□□ 2.6
ATP6AP2-218ENST00000636639 RB1CC1Q8TDY2 1594 aa31.26■■■□□ 2.59
ATP6AP2-218ENST00000636639 SUPT5HO00267 1087 aaKnown RBP30.92■■■□□ 2.54
ATP6AP2-218ENST00000636639 UNC13AQ9UPW8 1703 aa30.66■■■□□ 2.5
ATP6AP2-218ENST00000636639 PABPN1Q86U42 306 aaKnown RBP eCLIP30.32■■■□□ 2.44
ATP6AP2-218ENST00000636639 CECR2Q9BXF3 1484 aa30.31■■■□□ 2.44
ATP6AP2-218ENST00000636639 BICRAQ9NZM4 1560 aa30.3■■■□□ 2.44
ATP6AP2-218ENST00000636639 RSF1Q96T23 1441 aaPredicted RBP30.28■■■□□ 2.44
ATP6AP2-218ENST00000636639 MROH2BQ7Z745 1585 aa30.13■■■□□ 2.41
ATP6AP2-218ENST00000636639 BAZ1AQ9NRL2 1556 aaPredicted RBP30.07■■■□□ 2.4
ATP6AP2-218ENST00000636639 SMARCA4P51532 1647 aa29.93■■■□□ 2.38
ATP6AP2-218ENST00000636639 WIZO95785 1651 aa29.92■■■□□ 2.38
ATP6AP2-218ENST00000636639 TOP2AP11388 1531 aaKnown RBP29.55■■■□□ 2.32
ATP6AP2-218ENST00000636639 CHIC1Q5VXU3 224 aa29.54■■■□□ 2.32
ATP6AP2-218ENST00000636639 PEG3Q9GZU2 1588 aa29.47■■■□□ 2.31
ATP6AP2-218ENST00000636639 EIF4G1Q04637 1599 aaKnown RBP29.41■■■□□ 2.3
ATP6AP2-218ENST00000636639 ATAD2BQ9ULI0 1458 aa29.4■■■□□ 2.3
ATP6AP2-218ENST00000636639 SMARCA2P51531 1590 aa29.38■■■□□ 2.29
ATP6AP2-218ENST00000636639 CCDC88BA6NC98 1476 aa29.29■■■□□ 2.28
ATP6AP2-218ENST00000636639 BAZ1BQ9UIG0 1483 aaKnown RBP29.28■■■□□ 2.28
ATP6AP2-218ENST00000636639 NCAPD3P42695 1498 aa29.09■■■□□ 2.25
ATP6AP2-218ENST00000636639 HMGXB3Q12766 1538 aa29.05■■■□□ 2.24
ATP6AP2-218ENST00000636639 TRIM41Q8WV44 630 aa29■■■□□ 2.23
ATP6AP2-218ENST00000636639 CC2D2AQ9P2K1 1620 aa28.97■■■□□ 2.23
ATP6AP2-218ENST00000636639 ABCC8Q09428 1581 aa28.77■■■□□ 2.2
ATP6AP2-218ENST00000636639 FAM9AQ8IZU1 332 aaPredicted RBP28.57■■■□□ 2.16
ATP6AP2-218ENST00000636639 WRNQ14191 1432 aaPredicted RBP eCLIP28.53■■■□□ 2.16
ATP6AP2-218ENST00000636639 LOC105371045A0A1W2PR82 267 aa28.51■■■□□ 2.15
ATP6AP2-218ENST00000636639 CFTRP13569 1480 aa28.5■■■□□ 2.15
ATP6AP2-218ENST00000636639 CADPSQ9ULU8 1353 aa28.4■■■□□ 2.14
ATP6AP2-218ENST00000636639 SYNJ1O43426 1573 aa28.4■■■□□ 2.14
ATP6AP2-218ENST00000636639 PRDM2Q13029 1718 aa28.35■■■□□ 2.13
ATP6AP2-218ENST00000636639 DNAJC5BQ9UF47 199 aa28.28■■■□□ 2.12
ATP6AP2-218ENST00000636639 EHMT2Q96KQ7 1210 aa28.25■■■□□ 2.11
ATP6AP2-218ENST00000636639 SOGA1O94964 1423 aa28.24■■■□□ 2.11
ATP6AP2-218ENST00000636639 TOP2BQ02880 1626 aa28.24■■■□□ 2.11
ATP6AP2-218ENST00000636639 BIVM-ERCC5R4GMW8 1640 aa28.19■■■□□ 2.1
ATP6AP2-218ENST00000636639 NESP48681 1621 aa28.19■■■□□ 2.1
ATP6AP2-218ENST00000636639 CUX1P39880 1505 aa28.16■■■□□ 2.1
ATP6AP2-218ENST00000636639 RUSC2Q8N2Y8 1516 aa28.13■■■□□ 2.09
ATP6AP2-218ENST00000636639 FANCD2Q9BXW9 1451 aa28.12■■■□□ 2.09
ATP6AP2-218ENST00000636639 EEA1Q15075 1411 aa28.12■■■□□ 2.09
ATP6AP2-218ENST00000636639 LAMC3Q9Y6N6 1575 aa28.1■■■□□ 2.09
ATP6AP2-218ENST00000636639 CSRNP3Q8WYN3 585 aa28.04■■■□□ 2.08
ATP6AP2-218ENST00000636639 CEP164Q9UPV0 1460 aa27.93■■■□□ 2.06
ATP6AP2-218ENST00000636639 PDS5BQ9NTI5 1447 aa27.92■■■□□ 2.06
ATP6AP2-218ENST00000636639 FGD5Q6ZNL6 1462 aa27.86■■■□□ 2.05
ATP6AP2-218ENST00000636639 DNMBPQ6XZF7 1577 aa27.85■■■□□ 2.05
ATP6AP2-218ENST00000636639 KIF21AQ7Z4S6 1674 aa27.81■■■□□ 2.04
ATP6AP2-218ENST00000636639 TOPBP1Q92547 1522 aa27.81■■■□□ 2.04
ATP6AP2-218ENST00000636639 GOLGA3Q08378 1498 aa27.79■■■□□ 2.04
ATP6AP2-218ENST00000636639 KIF27Q86VH2 1401 aa27.79■■■□□ 2.04
ATP6AP2-218ENST00000636639 UBTFP17480 764 aaKnown RBP27.79■■■□□ 2.04
ATP6AP2-218ENST00000636639 KIF21BO75037 1637 aa27.76■■■□□ 2.03
ATP6AP2-218ENST00000636639 URB2Q14146 1524 aaKnown RBP27.75■■■□□ 2.03
ATP6AP2-218ENST00000636639 CUX2O14529 1486 aa27.72■■■□□ 2.03
ATP6AP2-218ENST00000636639 TNIKQ9UKE5 1360 aa27.71■■■□□ 2.03
ATP6AP2-218ENST00000636639 POLA1P09884 1462 aaPredicted RBP27.69■■■□□ 2.02
ATP6AP2-218ENST00000636639 RAD54L2Q9Y4B4 1467 aa27.65■■■□□ 2.02
ATP6AP2-218ENST00000636639 RAPGEF2Q9Y4G8 1499 aa27.65■■■□□ 2.02
ATP6AP2-218ENST00000636639 CEP162Q5TB80 1403 aa27.62■■■□□ 2.01
ATP6AP2-218ENST00000636639 PRXQ9BXM0 1461 aa27.58■■■□□ 2.01
ATP6AP2-218ENST00000636639 ABCA10Q8WWZ4 1543 aa27.56■■■□□ 2
ATP6AP2-218ENST00000636639 MRC2Q9UBG0 1479 aa27.55■■■□□ 2
ATP6AP2-218ENST00000636639 ERICH3Q5RHP9 1530 aa27.54■■■□□ 2
ATP6AP2-218ENST00000636639 IGF1RP08069 1367 aa27.52■■■□□ 2
ATP6AP2-218ENST00000636639 ERCC6Q03468 1493 aa27.5■■□□□ 1.99
ATP6AP2-218ENST00000636639 WDR97A6NE52 1622 aa27.44■■□□□ 1.98
ATP6AP2-218ENST00000636639 RANGAP1P46060 587 aaPredicted RBP27.41■■□□□ 1.98
ATP6AP2-218ENST00000636639 CARMIL1Q5VZK9 1371 aa27.41■■□□□ 1.98
ATP6AP2-218ENST00000636639 TDRD9Q8NDG6 1382 aaKnown RBP27.39■■□□□ 1.98
ATP6AP2-218ENST00000636639 CLIP1P30622 1438 aa27.38■■□□□ 1.97
ATP6AP2-218ENST00000636639 WDR62O43379 1518 aa27.36■■□□□ 1.97
ATP6AP2-218ENST00000636639 TARBP1Q13395 1621 aaKnown RBP27.35■■□□□ 1.97
ATP6AP2-218ENST00000636639 PCGF6Q9BYE7 350 aa27.34■■□□□ 1.97
ATP6AP2-218ENST00000636639 ABCA5Q8WWZ7 1642 aa27.32■■□□□ 1.96
ATP6AP2-218ENST00000636639 GAPVD1Q14C86 1478 aa27.31■■□□□ 1.96
ATP6AP2-218ENST00000636639 CUL7Q14999 1698 aa27.28■■□□□ 1.96
ATP6AP2-218ENST00000636639 THOC2Q8NI27 1593 aaKnown RBP27.27■■□□□ 1.96
ATP6AP2-218ENST00000636639 PPARGC1BQ86YN6 1023 aaKnown RBP27.25■■□□□ 1.95
ATP6AP2-218ENST00000636639 TRIM26Q12899 539 aaPredicted RBP27.23■■□□□ 1.95
ATP6AP2-218ENST00000636639 IFT140Q96RY7 1462 aa27.22■■□□□ 1.95
ATP6AP2-218ENST00000636639 AQRO60306 1485 aaKnown RBP eCLIP27.18■■□□□ 1.94
ATP6AP2-218ENST00000636639 PBRM1Q86U86 1689 aa27.14■■□□□ 1.94
ATP6AP2-218ENST00000636639 ZNF608Q9ULD9 1512 aaPredicted RBP27.12■■□□□ 1.93
ATP6AP2-218ENST00000636639 VPS8Q8N3P4 1428 aa27.12■■□□□ 1.93
ATP6AP2-218ENST00000636639 GRIN2BQ13224 1484 aa27.06■■□□□ 1.92
ATP6AP2-218ENST00000636639 ARAP1Q96P48 1450 aa27.06■■□□□ 1.92
ATP6AP2-218ENST00000636639 TTBK1Q5TCY1 1321 aaPredicted RBP27.05■■□□□ 1.92
ATP6AP2-218ENST00000636639 ARHGAP35Q9NRY4 1499 aa27.04■■□□□ 1.92
ATP6AP2-218ENST00000636639 CTTNBP2Q8WZ74 1663 aa27.01■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms