RNA–Protein interactions for RNA: ENST00000636422.1

ARID1A-213, Transcript of AT-rich interaction domain 1A, humanhuman

TSL 5

Gene ARID1A, Length 1,324 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-213ENST00000636422 AEBP2Q6ZN18 517 aaPredicted RBP32.76■■■□□ 2.83
ARID1A-213ENST00000636422 NISCHQ9Y2I1 1504 aa32.51■■■□□ 2.79
ARID1A-213ENST00000636422 CHIC1Q5VXU3 224 aa31.67■■■□□ 2.66
ARID1A-213ENST00000636422 CCDC180Q9P1Z9 1646 aa29.09■■■□□ 2.25
ARID1A-213ENST00000636422 ABCC9O60706 1549 aa28.55■■■□□ 2.16
ARID1A-213ENST00000636422 SENP3Q9H4L4 574 aaPredicted RBP28.05■■■□□ 2.08
ARID1A-213ENST00000636422 PHF23Q9BUL5 403 aaPredicted RBP27.69■■■□□ 2.02
ARID1A-213ENST00000636422 RB1CC1Q8TDY2 1594 aa27.42■■□□□ 1.98
ARID1A-213ENST00000636422 NACADO15069 1562 aa27.36■■□□□ 1.97
ARID1A-213ENST00000636422 MYO15BQ96JP2 1530 aa27.22■■□□□ 1.95
ARID1A-213ENST00000636422 ZCCHC6Q5VYS8 1495 aaKnown RBP27.09■■□□□ 1.93
ARID1A-213ENST00000636422 DCAF1Q9Y4B6 1507 aa26.98■■□□□ 1.91
ARID1A-213ENST00000636422 DCAF8L2P0C7V8 631 aa26.87■■□□□ 1.89
ARID1A-213ENST00000636422 UNC13AQ9UPW8 1703 aa26.84■■□□□ 1.89
ARID1A-213ENST00000636422 BICRAQ9NZM4 1560 aa26.69■■□□□ 1.86
ARID1A-213ENST00000636422 PABPN1Q86U42 306 aaKnown RBP eCLIP26.53■■□□□ 1.84
ARID1A-213ENST00000636422 DNAJC5BQ9UF47 199 aa26.45■■□□□ 1.83
ARID1A-213ENST00000636422 SHROOM4Q9ULL8 1493 aa26.44■■□□□ 1.82
ARID1A-213ENST00000636422 SCRIBQ14160 1630 aa26.4■■□□□ 1.82
ARID1A-213ENST00000636422 FOXD1Q16676 465 aa25.96■■□□□ 1.75
ARID1A-213ENST00000636422 EIF4G1Q04637 1599 aaKnown RBP25.96■■□□□ 1.75
ARID1A-213ENST00000636422 CC2D2AQ9P2K1 1620 aa25.88■■□□□ 1.73
ARID1A-213ENST00000636422 CECR2Q9BXF3 1484 aa25.72■■□□□ 1.71
ARID1A-213ENST00000636422 PLPPR3Q6T4P5 718 aa25.58■■□□□ 1.69
ARID1A-213ENST00000636422 SMARCA4P51532 1647 aa25.29■■□□□ 1.64
ARID1A-213ENST00000636422 NCAPD3P42695 1498 aa25.25■■□□□ 1.63
ARID1A-213ENST00000636422 ATAD2BQ9ULI0 1458 aa25.21■■□□□ 1.63
ARID1A-213ENST00000636422 BAZ1AQ9NRL2 1556 aaPredicted RBP25.21■■□□□ 1.63
ARID1A-213ENST00000636422 SMARCA2P51531 1590 aa25.16■■□□□ 1.62
ARID1A-213ENST00000636422 HMGXB3Q12766 1538 aa25.16■■□□□ 1.62
ARID1A-213ENST00000636422 PEG3Q9GZU2 1588 aa25.14■■□□□ 1.61
ARID1A-213ENST00000636422 MROH2BQ7Z745 1585 aa25.04■■□□□ 1.6
ARID1A-213ENST00000636422 BAZ1BQ9UIG0 1483 aaKnown RBP24.94■■□□□ 1.58
ARID1A-213ENST00000636422 WIZO95785 1651 aa24.72■■□□□ 1.55
ARID1A-213ENST00000636422 NESP48681 1621 aa24.67■■□□□ 1.54
ARID1A-213ENST00000636422 RSF1Q96T23 1441 aaPredicted RBP24.64■■□□□ 1.54
ARID1A-213ENST00000636422 LAMC3Q9Y6N6 1575 aa24.62■■□□□ 1.53
ARID1A-213ENST00000636422 ERCC6Q03468 1493 aa24.59■■□□□ 1.53
ARID1A-213ENST00000636422 CUX2O14529 1486 aa24.56■■□□□ 1.52
ARID1A-213ENST00000636422 PPP6R1Q9UPN7 881 aa24.56■■□□□ 1.52
ARID1A-213ENST00000636422 ADRA2BP18089 450 aa24.54■■□□□ 1.52
ARID1A-213ENST00000636422 TOP2AP11388 1531 aaKnown RBP24.51■■□□□ 1.51
ARID1A-213ENST00000636422 THOC2Q8NI27 1593 aaKnown RBP24.48■■□□□ 1.51
ARID1A-213ENST00000636422 PIAS4Q8N2W9 510 aaPredicted RBP24.44■■□□□ 1.5
ARID1A-213ENST00000636422 CADPSQ9ULU8 1353 aa24.43■■□□□ 1.5
ARID1A-213ENST00000636422 KIF21AQ7Z4S6 1674 aa24.39■■□□□ 1.5
ARID1A-213ENST00000636422 PDS5BQ9NTI5 1447 aa24.38■■□□□ 1.49
ARID1A-213ENST00000636422 CFTRP13569 1480 aa24.3■■□□□ 1.48
ARID1A-213ENST00000636422 MSH5O43196 834 aa24.28■■□□□ 1.48
ARID1A-213ENST00000636422 MRC2Q9UBG0 1479 aa24.21■■□□□ 1.47
ARID1A-213ENST00000636422 WDR62O43379 1518 aa24.2■■□□□ 1.46
ARID1A-213ENST00000636422 FANCD2Q9BXW9 1451 aa24.17■■□□□ 1.46
ARID1A-213ENST00000636422 CEP164Q9UPV0 1460 aa24.16■■□□□ 1.46
ARID1A-213ENST00000636422 CCDC88BA6NC98 1476 aa24.15■■□□□ 1.46
ARID1A-213ENST00000636422 PRDM2Q13029 1718 aa24.11■■□□□ 1.45
ARID1A-213ENST00000636422 DNAJC5Q9H3Z4 198 aa24■■□□□ 1.43
ARID1A-213ENST00000636422 URB2Q14146 1524 aaKnown RBP23.99■■□□□ 1.43
ARID1A-213ENST00000636422 TOPBP1Q92547 1522 aa23.78■■□□□ 1.4
ARID1A-213ENST00000636422 DNMBPQ6XZF7 1577 aa23.74■■□□□ 1.39
ARID1A-213ENST00000636422 ABCC8Q09428 1581 aa23.72■■□□□ 1.39
ARID1A-213ENST00000636422 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
ARID1A-213ENST00000636422 ZNF608Q9ULD9 1512 aaPredicted RBP23.6■■□□□ 1.37
ARID1A-213ENST00000636422 TARBP1Q13395 1621 aaKnown RBP23.59■■□□□ 1.37
ARID1A-213ENST00000636422 POLA1P09884 1462 aaPredicted RBP23.56■■□□□ 1.36
ARID1A-213ENST00000636422 EIF4G3O43432 1585 aaKnown RBP23.54■■□□□ 1.36
ARID1A-213ENST00000636422 SUPT5HO00267 1087 aaKnown RBP23.54■■□□□ 1.36
ARID1A-213ENST00000636422 CUX1P39880 1505 aa23.52■■□□□ 1.36
ARID1A-213ENST00000636422 FGD5Q6ZNL6 1462 aa23.45■■□□□ 1.34
ARID1A-213ENST00000636422 WDR97A6NE52 1622 aa23.42■■□□□ 1.34
ARID1A-213ENST00000636422 RAD54L2Q9Y4B4 1467 aa23.41■■□□□ 1.34
ARID1A-213ENST00000636422 AQRO60306 1485 aaKnown RBP eCLIP23.36■■□□□ 1.33
ARID1A-213ENST00000636422 SOGA1O94964 1423 aa23.36■■□□□ 1.33
ARID1A-213ENST00000636422 OSCARQ8IYS5 282 aa23.3■■□□□ 1.32
ARID1A-213ENST00000636422 BIVM-ERCC5R4GMW8 1640 aa23.27■■□□□ 1.32
ARID1A-213ENST00000636422 TDRD9Q8NDG6 1382 aaKnown RBP23.25■■□□□ 1.31
ARID1A-213ENST00000636422 ABCA10Q8WWZ4 1543 aa23.25■■□□□ 1.31
ARID1A-213ENST00000636422 TOP2BQ02880 1626 aa23.25■■□□□ 1.31
ARID1A-213ENST00000636422 CHD1O14646 1710 aa23.24■■□□□ 1.31
ARID1A-213ENST00000636422 ABCA5Q8WWZ7 1642 aa23.23■■□□□ 1.31
ARID1A-213ENST00000636422 SYNJ1O43426 1573 aa23.23■■□□□ 1.31
ARID1A-213ENST00000636422 WRNQ14191 1432 aaPredicted RBP eCLIP23.2■■□□□ 1.31
ARID1A-213ENST00000636422 SNAPC4Q5SXM2 1469 aa23.2■■□□□ 1.3
ARID1A-213ENST00000636422 MAGI1Q96QZ7 1491 aaPredicted RBP23.2■■□□□ 1.3
ARID1A-213ENST00000636422 GRIN2BQ13224 1484 aa23.18■■□□□ 1.3
ARID1A-213ENST00000636422 PBRM1Q86U86 1689 aa23.15■■□□□ 1.3
ARID1A-213ENST00000636422 GAPVD1Q14C86 1478 aa23.13■■□□□ 1.29
ARID1A-213ENST00000636422 RIMBP3CA6NJZ7 1639 aa23.12■■□□□ 1.29
ARID1A-213ENST00000636422 RIMBP3BA6NNM3 1639 aa23.12■■□□□ 1.29
ARID1A-213ENST00000636422 RIMBP3Q9UFD9 1639 aa23.12■■□□□ 1.29
ARID1A-213ENST00000636422 ARHGEF11O15085 1522 aa23.11■■□□□ 1.29
ARID1A-213ENST00000636422 SYNJ2O15056 1496 aa23.09■■□□□ 1.29
ARID1A-213ENST00000636422 CLASP1Q7Z460 1538 aa23.08■■□□□ 1.29
ARID1A-213ENST00000636422 ADAMTS12P58397 1594 aa23.01■■□□□ 1.27
ARID1A-213ENST00000636422 ERICH3Q5RHP9 1530 aa22.96■■□□□ 1.27
ARID1A-213ENST00000636422 FBLN2P98095 1184 aa22.94■■□□□ 1.26
ARID1A-213ENST00000636422 TRIM41Q8WV44 630 aa22.93■■□□□ 1.26
ARID1A-213ENST00000636422 GRIN2AQ12879 1464 aa22.92■■□□□ 1.26
ARID1A-213ENST00000636422 ARAP1Q96P48 1450 aa22.92■■□□□ 1.26
ARID1A-213ENST00000636422 CHMP7Q8WUX9 453 aaPredicted RBP22.9■■□□□ 1.26
ARID1A-213ENST00000636422 FHAD1B1AJZ9 1412 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms