RNA–Protein interactions for RNA: ENST00000636399.1

CNTNAP2-211, Transcript of contactin associated protein like 2, humanhuman

TSL 5

Gene CNTNAP2, Length 2,949 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-211ENST00000636399 NISCHQ9Y2I1 1504 aa16.25■□□□□ 0.19
CNTNAP2-211ENST00000636399 CCDC180Q9P1Z9 1646 aa14.54□□□□□ -0.08
CNTNAP2-211ENST00000636399 ABCC9O60706 1549 aa13.8□□□□□ -0.2
CNTNAP2-211ENST00000636399 ZCCHC6Q5VYS8 1495 aaKnown RBP13.62□□□□□ -0.23
CNTNAP2-211ENST00000636399 MYO15BQ96JP2 1530 aa13.55□□□□□ -0.24
CNTNAP2-211ENST00000636399 DCAF1Q9Y4B6 1507 aa13.54□□□□□ -0.24
CNTNAP2-211ENST00000636399 NACADO15069 1562 aa13.51□□□□□ -0.25
CNTNAP2-211ENST00000636399 RB1CC1Q8TDY2 1594 aa13.47□□□□□ -0.25
CNTNAP2-211ENST00000636399 UNC13AQ9UPW8 1703 aa13.37□□□□□ -0.27
CNTNAP2-211ENST00000636399 BICRAQ9NZM4 1560 aa13.15□□□□□ -0.3
CNTNAP2-211ENST00000636399 SCRIBQ14160 1630 aa13.11□□□□□ -0.31
CNTNAP2-211ENST00000636399 DCAF8L2P0C7V8 631 aa13.08□□□□□ -0.32
CNTNAP2-211ENST00000636399 SHROOM4Q9ULL8 1493 aa13.02□□□□□ -0.32
CNTNAP2-211ENST00000636399 PABPN1Q86U42 306 aaKnown RBP eCLIP12.8□□□□□ -0.36
CNTNAP2-211ENST00000636399 EIF4G1Q04637 1599 aaKnown RBP12.72□□□□□ -0.37
CNTNAP2-211ENST00000636399 SMARCA4P51532 1647 aa12.63□□□□□ -0.39
CNTNAP2-211ENST00000636399 CC2D2AQ9P2K1 1620 aa12.62□□□□□ -0.39
CNTNAP2-211ENST00000636399 CECR2Q9BXF3 1484 aa12.59□□□□□ -0.39
CNTNAP2-211ENST00000636399 BAZ1AQ9NRL2 1556 aaPredicted RBP12.58□□□□□ -0.4
CNTNAP2-211ENST00000636399 PEG3Q9GZU2 1588 aa12.57□□□□□ -0.4
CNTNAP2-211ENST00000636399 MROH2BQ7Z745 1585 aa12.51□□□□□ -0.41
CNTNAP2-211ENST00000636399 DNAJC5BQ9UF47 199 aa12.51□□□□□ -0.41
CNTNAP2-211ENST00000636399 HMGXB3Q12766 1538 aa12.46□□□□□ -0.42
CNTNAP2-211ENST00000636399 SMARCA2P51531 1590 aa12.45□□□□□ -0.42
CNTNAP2-211ENST00000636399 ATAD2BQ9ULI0 1458 aa12.44□□□□□ -0.42
CNTNAP2-211ENST00000636399 WIZO95785 1651 aa12.43□□□□□ -0.42
CNTNAP2-211ENST00000636399 NCAPD3P42695 1498 aa12.42□□□□□ -0.42
CNTNAP2-211ENST00000636399 RSF1Q96T23 1441 aaPredicted RBP12.38□□□□□ -0.43
CNTNAP2-211ENST00000636399 TOP2AP11388 1531 aaKnown RBP12.31□□□□□ -0.44
CNTNAP2-211ENST00000636399 BAZ1BQ9UIG0 1483 aaKnown RBP12.3□□□□□ -0.44
CNTNAP2-211ENST00000636399 PRDM2Q13029 1718 aa12.19□□□□□ -0.46
CNTNAP2-211ENST00000636399 LAMC3Q9Y6N6 1575 aa12.12□□□□□ -0.47
CNTNAP2-211ENST00000636399 CCDC88BA6NC98 1476 aa12.08□□□□□ -0.48
CNTNAP2-211ENST00000636399 KIF21AQ7Z4S6 1674 aa12.05□□□□□ -0.48
CNTNAP2-211ENST00000636399 NESP48681 1621 aa12.04□□□□□ -0.48
CNTNAP2-211ENST00000636399 CFTRP13569 1480 aa12.03□□□□□ -0.48
CNTNAP2-211ENST00000636399 THOC2Q8NI27 1593 aaKnown RBP11.99□□□□□ -0.49
CNTNAP2-211ENST00000636399 CADPSQ9ULU8 1353 aa11.99□□□□□ -0.49
CNTNAP2-211ENST00000636399 SUPT5HO00267 1087 aaKnown RBP11.89□□□□□ -0.51
CNTNAP2-211ENST00000636399 WDR62O43379 1518 aa11.88□□□□□ -0.51
CNTNAP2-211ENST00000636399 PDS5BQ9NTI5 1447 aa11.88□□□□□ -0.51
CNTNAP2-211ENST00000636399 FANCD2Q9BXW9 1451 aa11.88□□□□□ -0.51
CNTNAP2-211ENST00000636399 CEP164Q9UPV0 1460 aa11.86□□□□□ -0.51
CNTNAP2-211ENST00000636399 MRC2Q9UBG0 1479 aa11.84□□□□□ -0.51
CNTNAP2-211ENST00000636399 ERCC6Q03468 1493 aa11.83□□□□□ -0.52
CNTNAP2-211ENST00000636399 HRCP23327 699 aa11.83□□□□□ -0.52
CNTNAP2-211ENST00000636399 URB2Q14146 1524 aaKnown RBP11.82□□□□□ -0.52
CNTNAP2-211ENST00000636399 CUX2O14529 1486 aa11.8□□□□□ -0.52
CNTNAP2-211ENST00000636399 DNMBPQ6XZF7 1577 aa11.79□□□□□ -0.52
CNTNAP2-211ENST00000636399 BIVM-ERCC5R4GMW8 1640 aa11.78□□□□□ -0.52
CNTNAP2-211ENST00000636399 PELP1Q8IZL8 1130 aaKnown RBP11.77□□□□□ -0.53
CNTNAP2-211ENST00000636399 CUX1P39880 1505 aa11.75□□□□□ -0.53
CNTNAP2-211ENST00000636399 TOPBP1Q92547 1522 aa11.75□□□□□ -0.53
CNTNAP2-211ENST00000636399 WDR97A6NE52 1622 aa11.75□□□□□ -0.53
CNTNAP2-211ENST00000636399 ABCC8Q09428 1581 aa11.73□□□□□ -0.53
CNTNAP2-211ENST00000636399 TOP2BQ02880 1626 aa11.72□□□□□ -0.53
CNTNAP2-211ENST00000636399 SYNJ1O43426 1573 aa11.72□□□□□ -0.53
CNTNAP2-211ENST00000636399 TARBP1Q13395 1621 aaKnown RBP11.71□□□□□ -0.53
CNTNAP2-211ENST00000636399 PPARGC1BQ86YN6 1023 aaKnown RBP11.69□□□□□ -0.54
CNTNAP2-211ENST00000636399 POLA1P09884 1462 aaPredicted RBP11.65□□□□□ -0.54
CNTNAP2-211ENST00000636399 FGD5Q6ZNL6 1462 aa11.63□□□□□ -0.55
CNTNAP2-211ENST00000636399 WRNQ14191 1432 aaPredicted RBP eCLIP11.62□□□□□ -0.55
CNTNAP2-211ENST00000636399 IFT140Q96RY7 1462 aa11.61□□□□□ -0.55
CNTNAP2-211ENST00000636399 EIF4G3O43432 1585 aaKnown RBP11.61□□□□□ -0.55
CNTNAP2-211ENST00000636399 ABCA5Q8WWZ7 1642 aa11.61□□□□□ -0.55
CNTNAP2-211ENST00000636399 PBRM1Q86U86 1689 aa11.58□□□□□ -0.56
CNTNAP2-211ENST00000636399 ABCA10Q8WWZ4 1543 aa11.57□□□□□ -0.56
CNTNAP2-211ENST00000636399 ZNF608Q9ULD9 1512 aaPredicted RBP11.55□□□□□ -0.56
CNTNAP2-211ENST00000636399 RAD54L2Q9Y4B4 1467 aa11.54□□□□□ -0.56
CNTNAP2-211ENST00000636399 SOGA1O94964 1423 aa11.51□□□□□ -0.57
CNTNAP2-211ENST00000636399 PCGF6Q9BYE7 350 aa11.49□□□□□ -0.57
CNTNAP2-211ENST00000636399 CHD1O14646 1710 aa11.47□□□□□ -0.57
CNTNAP2-211ENST00000636399 ADAMTS12P58397 1594 aa11.45□□□□□ -0.58
CNTNAP2-211ENST00000636399 ERICH3Q5RHP9 1530 aa11.44□□□□□ -0.58
CNTNAP2-211ENST00000636399 AQRO60306 1485 aaKnown RBP eCLIP11.44□□□□□ -0.58
CNTNAP2-211ENST00000636399 GAPVD1Q14C86 1478 aa11.42□□□□□ -0.58
CNTNAP2-211ENST00000636399 SCAF1Q9H7N4 1312 aaKnown RBP11.42□□□□□ -0.58
CNTNAP2-211ENST00000636399 GRIN2BQ13224 1484 aa11.42□□□□□ -0.58
CNTNAP2-211ENST00000636399 CUL7Q14999 1698 aa11.41□□□□□ -0.58
CNTNAP2-211ENST00000636399 MAGI1Q96QZ7 1491 aaPredicted RBP11.41□□□□□ -0.58
CNTNAP2-211ENST00000636399 SNAPC4Q5SXM2 1469 aa11.39□□□□□ -0.59
CNTNAP2-211ENST00000636399 TDRD9Q8NDG6 1382 aaKnown RBP11.39□□□□□ -0.59
CNTNAP2-211ENST00000636399 MYT1Q01538 1121 aa11.35□□□□□ -0.59
CNTNAP2-211ENST00000636399 SYNJ2O15056 1496 aa11.35□□□□□ -0.59
CNTNAP2-211ENST00000636399 KIF27Q86VH2 1401 aa11.34□□□□□ -0.59
CNTNAP2-211ENST00000636399 CLASP1Q7Z460 1538 aa11.34□□□□□ -0.59
CNTNAP2-211ENST00000636399 RUSC2Q8N2Y8 1516 aa11.34□□□□□ -0.59
CNTNAP2-211ENST00000636399 CEP170Q5SW79 1584 aa11.31□□□□□ -0.6
CNTNAP2-211ENST00000636399 GRIN2AQ12879 1464 aa11.3□□□□□ -0.6
CNTNAP2-211ENST00000636399 CHIC1Q5VXU3 224 aa11.3□□□□□ -0.6
CNTNAP2-211ENST00000636399 FHAD1B1AJZ9 1412 aa11.3□□□□□ -0.6
CNTNAP2-211ENST00000636399 IGF1RP08069 1367 aa11.29□□□□□ -0.6
CNTNAP2-211ENST00000636399 SHROOM2Q13796 1616 aa11.29□□□□□ -0.6
CNTNAP2-211ENST00000636399 NUP160Q12769 1436 aa11.28□□□□□ -0.6
CNTNAP2-211ENST00000636399 CTTNBP2Q8WZ74 1663 aa11.27□□□□□ -0.6
CNTNAP2-211ENST00000636399 EEA1Q15075 1411 aa11.26□□□□□ -0.61
CNTNAP2-211ENST00000636399 KIF21BO75037 1637 aa11.26□□□□□ -0.61
CNTNAP2-211ENST00000636399 PRXQ9BXM0 1461 aa11.26□□□□□ -0.61
CNTNAP2-211ENST00000636399 TRIM41Q8WV44 630 aa11.25□□□□□ -0.61
CNTNAP2-211ENST00000636399 RAPGEF2Q9Y4G8 1499 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms