RNA–Protein interactions for RNA: ENST00000636245.1

CHRNA7-211, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,794 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-211ENST00000636245 NISCHQ9Y2I1 1504 aa39.33■■■■□ 3.89
CHRNA7-211ENST00000636245 CCDC180Q9P1Z9 1646 aa34.2■■■■□ 3.07
CHRNA7-211ENST00000636245 ZCCHC6Q5VYS8 1495 aaKnown RBP33.06■■■□□ 2.88
CHRNA7-211ENST00000636245 DCAF1Q9Y4B6 1507 aa32.47■■■□□ 2.79
CHRNA7-211ENST00000636245 DCAF8L2P0C7V8 631 aa32.43■■■□□ 2.78
CHRNA7-211ENST00000636245 SHROOM4Q9ULL8 1493 aa32.24■■■□□ 2.75
CHRNA7-211ENST00000636245 ABCC9O60706 1549 aa32.24■■■□□ 2.75
CHRNA7-211ENST00000636245 MYO15BQ96JP2 1530 aa32■■■□□ 2.71
CHRNA7-211ENST00000636245 NACADO15069 1562 aa31.79■■■□□ 2.68
CHRNA7-211ENST00000636245 SCRIBQ14160 1630 aa31.52■■■□□ 2.64
CHRNA7-211ENST00000636245 RB1CC1Q8TDY2 1594 aa31.49■■■□□ 2.63
CHRNA7-211ENST00000636245 SUPT5HO00267 1087 aaKnown RBP31.08■■■□□ 2.57
CHRNA7-211ENST00000636245 UNC13AQ9UPW8 1703 aa31.02■■■□□ 2.56
CHRNA7-211ENST00000636245 BICRAQ9NZM4 1560 aa30.63■■■□□ 2.49
CHRNA7-211ENST00000636245 CECR2Q9BXF3 1484 aa30.6■■■□□ 2.49
CHRNA7-211ENST00000636245 RSF1Q96T23 1441 aaPredicted RBP30.59■■■□□ 2.49
CHRNA7-211ENST00000636245 PABPN1Q86U42 306 aaKnown RBP eCLIP30.46■■■□□ 2.47
CHRNA7-211ENST00000636245 MROH2BQ7Z745 1585 aa30.44■■■□□ 2.46
CHRNA7-211ENST00000636245 BAZ1AQ9NRL2 1556 aaPredicted RBP30.32■■■□□ 2.44
CHRNA7-211ENST00000636245 WIZO95785 1651 aa30.23■■■□□ 2.43
CHRNA7-211ENST00000636245 SMARCA4P51532 1647 aa30.21■■■□□ 2.43
CHRNA7-211ENST00000636245 CHIC1Q5VXU3 224 aa29.86■■■□□ 2.37
CHRNA7-211ENST00000636245 TOP2AP11388 1531 aaKnown RBP29.84■■■□□ 2.37
CHRNA7-211ENST00000636245 PEG3Q9GZU2 1588 aa29.81■■■□□ 2.36
CHRNA7-211ENST00000636245 ATAD2BQ9ULI0 1458 aa29.66■■■□□ 2.34
CHRNA7-211ENST00000636245 EIF4G1Q04637 1599 aaKnown RBP29.64■■■□□ 2.34
CHRNA7-211ENST00000636245 SMARCA2P51531 1590 aa29.61■■■□□ 2.33
CHRNA7-211ENST00000636245 CCDC88BA6NC98 1476 aa29.57■■■□□ 2.32
CHRNA7-211ENST00000636245 BAZ1BQ9UIG0 1483 aaKnown RBP29.47■■■□□ 2.31
CHRNA7-211ENST00000636245 NCAPD3P42695 1498 aa29.36■■■□□ 2.29
CHRNA7-211ENST00000636245 HMGXB3Q12766 1538 aa29.31■■■□□ 2.28
CHRNA7-211ENST00000636245 CC2D2AQ9P2K1 1620 aa29.18■■■□□ 2.26
CHRNA7-211ENST00000636245 TRIM41Q8WV44 630 aa29.17■■■□□ 2.26
CHRNA7-211ENST00000636245 ABCC8Q09428 1581 aa29.03■■■□□ 2.24
CHRNA7-211ENST00000636245 LOC105371045A0A1W2PR82 267 aa28.77■■■□□ 2.2
CHRNA7-211ENST00000636245 CFTRP13569 1480 aa28.75■■■□□ 2.19
CHRNA7-211ENST00000636245 WRNQ14191 1432 aaPredicted RBP eCLIP28.74■■■□□ 2.19
CHRNA7-211ENST00000636245 FAM9AQ8IZU1 332 aaPredicted RBP28.7■■■□□ 2.19
CHRNA7-211ENST00000636245 SYNJ1O43426 1573 aa28.7■■■□□ 2.18
CHRNA7-211ENST00000636245 PRDM2Q13029 1718 aa28.68■■■□□ 2.18
CHRNA7-211ENST00000636245 CADPSQ9ULU8 1353 aa28.61■■■□□ 2.17
CHRNA7-211ENST00000636245 TOP2BQ02880 1626 aa28.53■■■□□ 2.16
CHRNA7-211ENST00000636245 BIVM-ERCC5R4GMW8 1640 aa28.51■■■□□ 2.15
CHRNA7-211ENST00000636245 SOGA1O94964 1423 aa28.5■■■□□ 2.15
CHRNA7-211ENST00000636245 DNAJC5BQ9UF47 199 aa28.49■■■□□ 2.15
CHRNA7-211ENST00000636245 CUX1P39880 1505 aa28.44■■■□□ 2.14
CHRNA7-211ENST00000636245 RUSC2Q8N2Y8 1516 aa28.44■■■□□ 2.14
CHRNA7-211ENST00000636245 NESP48681 1621 aa28.39■■■□□ 2.14
CHRNA7-211ENST00000636245 EEA1Q15075 1411 aa28.37■■■□□ 2.13
CHRNA7-211ENST00000636245 LAMC3Q9Y6N6 1575 aa28.32■■■□□ 2.12
CHRNA7-211ENST00000636245 EHMT2Q96KQ7 1210 aa28.32■■■□□ 2.12
CHRNA7-211ENST00000636245 FANCD2Q9BXW9 1451 aa28.31■■■□□ 2.12
CHRNA7-211ENST00000636245 CSRNP3Q8WYN3 585 aa28.27■■■□□ 2.12
CHRNA7-211ENST00000636245 DNMBPQ6XZF7 1577 aa28.09■■■□□ 2.09
CHRNA7-211ENST00000636245 CEP164Q9UPV0 1460 aa28.09■■■□□ 2.09
CHRNA7-211ENST00000636245 FGD5Q6ZNL6 1462 aa28.07■■■□□ 2.08
CHRNA7-211ENST00000636245 KIF21BO75037 1637 aa28.07■■■□□ 2.08
CHRNA7-211ENST00000636245 PDS5BQ9NTI5 1447 aa28.07■■■□□ 2.08
CHRNA7-211ENST00000636245 KIF21AQ7Z4S6 1674 aa28.06■■■□□ 2.08
CHRNA7-211ENST00000636245 TOPBP1Q92547 1522 aa28.04■■■□□ 2.08
CHRNA7-211ENST00000636245 GOLGA3Q08378 1498 aa28.03■■■□□ 2.08
CHRNA7-211ENST00000636245 URB2Q14146 1524 aaKnown RBP27.99■■■□□ 2.07
CHRNA7-211ENST00000636245 KIF27Q86VH2 1401 aa27.98■■■□□ 2.07
CHRNA7-211ENST00000636245 TNIKQ9UKE5 1360 aa27.98■■■□□ 2.07
CHRNA7-211ENST00000636245 CUX2O14529 1486 aa27.91■■■□□ 2.06
CHRNA7-211ENST00000636245 POLA1P09884 1462 aaPredicted RBP27.91■■■□□ 2.06
CHRNA7-211ENST00000636245 UBTFP17480 764 aaKnown RBP27.91■■■□□ 2.06
CHRNA7-211ENST00000636245 RAPGEF2Q9Y4G8 1499 aa27.9■■■□□ 2.06
CHRNA7-211ENST00000636245 PRXQ9BXM0 1461 aa27.88■■■□□ 2.05
CHRNA7-211ENST00000636245 RAD54L2Q9Y4B4 1467 aa27.86■■■□□ 2.05
CHRNA7-211ENST00000636245 CEP162Q5TB80 1403 aa27.85■■■□□ 2.05
CHRNA7-211ENST00000636245 ERICH3Q5RHP9 1530 aa27.82■■■□□ 2.04
CHRNA7-211ENST00000636245 ABCA10Q8WWZ4 1543 aa27.81■■■□□ 2.04
CHRNA7-211ENST00000636245 IGF1RP08069 1367 aa27.78■■■□□ 2.04
CHRNA7-211ENST00000636245 WDR97A6NE52 1622 aa27.77■■■□□ 2.04
CHRNA7-211ENST00000636245 MRC2Q9UBG0 1479 aa27.73■■■□□ 2.03
CHRNA7-211ENST00000636245 TARBP1Q13395 1621 aaKnown RBP27.64■■■□□ 2.02
CHRNA7-211ENST00000636245 CARMIL1Q5VZK9 1371 aa27.61■■■□□ 2.01
CHRNA7-211ENST00000636245 ABCA5Q8WWZ7 1642 aa27.61■■■□□ 2.01
CHRNA7-211ENST00000636245 CLIP1P30622 1438 aa27.6■■■□□ 2.01
CHRNA7-211ENST00000636245 WDR62O43379 1518 aa27.6■■■□□ 2.01
CHRNA7-211ENST00000636245 PCGF6Q9BYE7 350 aa27.56■■■□□ 2
CHRNA7-211ENST00000636245 TDRD9Q8NDG6 1382 aaKnown RBP27.56■■■□□ 2
CHRNA7-211ENST00000636245 ERCC6Q03468 1493 aa27.55■■■□□ 2
CHRNA7-211ENST00000636245 CUL7Q14999 1698 aa27.52■■■□□ 2
CHRNA7-211ENST00000636245 THOC2Q8NI27 1593 aaKnown RBP27.51■■□□□ 1.99
CHRNA7-211ENST00000636245 GAPVD1Q14C86 1478 aa27.51■■□□□ 1.99
CHRNA7-211ENST00000636245 TRIM26Q12899 539 aaPredicted RBP27.48■■□□□ 1.99
CHRNA7-211ENST00000636245 RANGAP1P46060 587 aaPredicted RBP27.45■■□□□ 1.99
CHRNA7-211ENST00000636245 PPARGC1BQ86YN6 1023 aaKnown RBP27.41■■□□□ 1.98
CHRNA7-211ENST00000636245 IFT140Q96RY7 1462 aa27.4■■□□□ 1.98
CHRNA7-211ENST00000636245 PBRM1Q86U86 1689 aa27.4■■□□□ 1.98
CHRNA7-211ENST00000636245 VPS8Q8N3P4 1428 aa27.37■■□□□ 1.97
CHRNA7-211ENST00000636245 AQRO60306 1485 aaKnown RBP eCLIP27.36■■□□□ 1.97
CHRNA7-211ENST00000636245 ARAP1Q96P48 1450 aa27.36■■□□□ 1.97
CHRNA7-211ENST00000636245 ZNF608Q9ULD9 1512 aaPredicted RBP27.33■■□□□ 1.96
CHRNA7-211ENST00000636245 ARHGAP35Q9NRY4 1499 aa27.31■■□□□ 1.96
CHRNA7-211ENST00000636245 CTTNBP2Q8WZ74 1663 aa27.29■■□□□ 1.96
CHRNA7-211ENST00000636245 GRIN2BQ13224 1484 aa27.25■■□□□ 1.95
CHRNA7-211ENST00000636245 EIF4G3O43432 1585 aaKnown RBP27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms