RNA–Protein interactions for RNA: ENST00000636146.1

SYNGAP1-212, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 161 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-212ENST00000636146 NISCHQ9Y2I1 1504 aa19.24■□□□□ 0.67
SYNGAP1-212ENST00000636146 ABCC9O60706 1549 aa17.37■□□□□ 0.37
SYNGAP1-212ENST00000636146 CCDC180Q9P1Z9 1646 aa17.28■□□□□ 0.36
SYNGAP1-212ENST00000636146 RB1CC1Q8TDY2 1594 aa16.51■□□□□ 0.23
SYNGAP1-212ENST00000636146 DCAF8L2P0C7V8 631 aa16.48■□□□□ 0.23
SYNGAP1-212ENST00000636146 NACADO15069 1562 aa16.36■□□□□ 0.21
SYNGAP1-212ENST00000636146 DNAJC5BQ9UF47 199 aa16.22■□□□□ 0.19
SYNGAP1-212ENST00000636146 PABPN1Q86U42 306 aaKnown RBP eCLIP16.18■□□□□ 0.18
SYNGAP1-212ENST00000636146 MYO15BQ96JP2 1530 aa16.06■□□□□ 0.16
SYNGAP1-212ENST00000636146 UNC13AQ9UPW8 1703 aa16.04■□□□□ 0.16
SYNGAP1-212ENST00000636146 BICRAQ9NZM4 1560 aa15.92■□□□□ 0.14
SYNGAP1-212ENST00000636146 ZCCHC6Q5VYS8 1495 aaKnown RBP15.91■□□□□ 0.14
SYNGAP1-212ENST00000636146 DCAF1Q9Y4B6 1507 aa15.85■□□□□ 0.13
SYNGAP1-212ENST00000636146 SCRIBQ14160 1630 aa15.79■□□□□ 0.12
SYNGAP1-212ENST00000636146 SHROOM4Q9ULL8 1493 aa15.76■□□□□ 0.11
SYNGAP1-212ENST00000636146 CC2D2AQ9P2K1 1620 aa15.65■□□□□ 0.1
SYNGAP1-212ENST00000636146 CECR2Q9BXF3 1484 aa15.64■□□□□ 0.09
SYNGAP1-212ENST00000636146 EIF4G1Q04637 1599 aaKnown RBP15.59■□□□□ 0.09
SYNGAP1-212ENST00000636146 NCAPD3P42695 1498 aa15.08■□□□□ 0
SYNGAP1-212ENST00000636146 ERCC6Q03468 1493 aa15.07■□□□□ 0
SYNGAP1-212ENST00000636146 SMARCA2P51531 1590 aa15.04■□□□□ -0
SYNGAP1-212ENST00000636146 ATAD2BQ9ULI0 1458 aa15.03■□□□□ -0
SYNGAP1-212ENST00000636146 SMARCA4P51532 1647 aa15.02□□□□□ -0.01
SYNGAP1-212ENST00000636146 DNAJC5Q9H3Z4 198 aa14.99□□□□□ -0.01
SYNGAP1-212ENST00000636146 BAZ1AQ9NRL2 1556 aaPredicted RBP14.98□□□□□ -0.01
SYNGAP1-212ENST00000636146 HMGXB3Q12766 1538 aa14.97□□□□□ -0.01
SYNGAP1-212ENST00000636146 CUX2O14529 1486 aa14.95□□□□□ -0.02
SYNGAP1-212ENST00000636146 BAZ1BQ9UIG0 1483 aaKnown RBP14.95□□□□□ -0.02
SYNGAP1-212ENST00000636146 NESP48681 1621 aa14.85□□□□□ -0.03
SYNGAP1-212ENST00000636146 PEG3Q9GZU2 1588 aa14.81□□□□□ -0.04
SYNGAP1-212ENST00000636146 MROH2BQ7Z745 1585 aa14.81□□□□□ -0.04
SYNGAP1-212ENST00000636146 LAMC3Q9Y6N6 1575 aa14.78□□□□□ -0.04
SYNGAP1-212ENST00000636146 PDS5BQ9NTI5 1447 aa14.75□□□□□ -0.05
SYNGAP1-212ENST00000636146 THOC2Q8NI27 1593 aaKnown RBP14.68□□□□□ -0.06
SYNGAP1-212ENST00000636146 KIF21AQ7Z4S6 1674 aa14.67□□□□□ -0.06
SYNGAP1-212ENST00000636146 CADPSQ9ULU8 1353 aa14.66□□□□□ -0.06
SYNGAP1-212ENST00000636146 WIZO95785 1651 aa14.65□□□□□ -0.06
SYNGAP1-212ENST00000636146 MRC2Q9UBG0 1479 aa14.58□□□□□ -0.08
SYNGAP1-212ENST00000636146 CEP164Q9UPV0 1460 aa14.55□□□□□ -0.08
SYNGAP1-212ENST00000636146 FANCD2Q9BXW9 1451 aa14.5□□□□□ -0.09
SYNGAP1-212ENST00000636146 RSF1Q96T23 1441 aaPredicted RBP14.5□□□□□ -0.09
SYNGAP1-212ENST00000636146 WDR62O43379 1518 aa14.5□□□□□ -0.09
SYNGAP1-212ENST00000636146 TOP2AP11388 1531 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-212ENST00000636146 CFTRP13569 1480 aa14.44□□□□□ -0.1
SYNGAP1-212ENST00000636146 TRIM41Q8WV44 630 aa14.44□□□□□ -0.1
SYNGAP1-212ENST00000636146 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
SYNGAP1-212ENST00000636146 URB2Q14146 1524 aaKnown RBP14.33□□□□□ -0.12
SYNGAP1-212ENST00000636146 PRDM2Q13029 1718 aa14.31□□□□□ -0.12
SYNGAP1-212ENST00000636146 CCDC88BA6NC98 1476 aa14.31□□□□□ -0.12
SYNGAP1-212ENST00000636146 IFT140Q96RY7 1462 aa14.24□□□□□ -0.13
SYNGAP1-212ENST00000636146 ABCC8Q09428 1581 aa14.23□□□□□ -0.13
SYNGAP1-212ENST00000636146 TOPBP1Q92547 1522 aa14.2□□□□□ -0.14
SYNGAP1-212ENST00000636146 ZNF608Q9ULD9 1512 aaPredicted RBP14.17□□□□□ -0.14
SYNGAP1-212ENST00000636146 DNMBPQ6XZF7 1577 aa14.15□□□□□ -0.14
SYNGAP1-212ENST00000636146 FBLN2P98095 1184 aa14.14□□□□□ -0.15
SYNGAP1-212ENST00000636146 EIF4G3O43432 1585 aaKnown RBP14.11□□□□□ -0.15
SYNGAP1-212ENST00000636146 AQRO60306 1485 aaKnown RBP eCLIP14.08□□□□□ -0.16
SYNGAP1-212ENST00000636146 RIMBP3CA6NJZ7 1639 aa14.08□□□□□ -0.16
SYNGAP1-212ENST00000636146 RIMBP3BA6NNM3 1639 aa14.08□□□□□ -0.16
SYNGAP1-212ENST00000636146 RIMBP3Q9UFD9 1639 aa14.08□□□□□ -0.16
SYNGAP1-212ENST00000636146 SOGA1O94964 1423 aa14.05□□□□□ -0.16
SYNGAP1-212ENST00000636146 POLA1P09884 1462 aaPredicted RBP14.04□□□□□ -0.16
SYNGAP1-212ENST00000636146 CYB5RLQ6IPT4 315 aa14.03□□□□□ -0.16
SYNGAP1-212ENST00000636146 ARHGEF11O15085 1522 aa14.03□□□□□ -0.16
SYNGAP1-212ENST00000636146 TARBP1Q13395 1621 aaKnown RBP14.03□□□□□ -0.16
SYNGAP1-212ENST00000636146 CHD1O14646 1710 aa14.01□□□□□ -0.17
SYNGAP1-212ENST00000636146 RAD54L2Q9Y4B4 1467 aa14.01□□□□□ -0.17
SYNGAP1-212ENST00000636146 SUPT5HO00267 1087 aaKnown RBP14.01□□□□□ -0.17
SYNGAP1-212ENST00000636146 TDRD9Q8NDG6 1382 aaKnown RBP14□□□□□ -0.17
SYNGAP1-212ENST00000636146 CHMP7Q8WUX9 453 aaPredicted RBP13.99□□□□□ -0.17
SYNGAP1-212ENST00000636146 FGD5Q6ZNL6 1462 aa13.98□□□□□ -0.17
SYNGAP1-212ENST00000636146 TRHP20396 242 aaPredicted RBP13.96□□□□□ -0.17
SYNGAP1-212ENST00000636146 SNAPC4Q5SXM2 1469 aa13.93□□□□□ -0.18
SYNGAP1-212ENST00000636146 WDR97A6NE52 1622 aa13.93□□□□□ -0.18
SYNGAP1-212ENST00000636146 CUX1P39880 1505 aa13.92□□□□□ -0.18
SYNGAP1-212ENST00000636146 GRIN2BQ13224 1484 aa13.91□□□□□ -0.18
SYNGAP1-212ENST00000636146 MAGI1Q96QZ7 1491 aaPredicted RBP13.9□□□□□ -0.18
SYNGAP1-212ENST00000636146 SYNJ1O43426 1573 aa13.89□□□□□ -0.19
SYNGAP1-212ENST00000636146 ARAP1Q96P48 1450 aa13.87□□□□□ -0.19
SYNGAP1-212ENST00000636146 GAPVD1Q14C86 1478 aa13.86□□□□□ -0.19
SYNGAP1-212ENST00000636146 SYNJ2O15056 1496 aa13.85□□□□□ -0.19
SYNGAP1-212ENST00000636146 PBRM1Q86U86 1689 aa13.82□□□□□ -0.2
SYNGAP1-212ENST00000636146 CLASP1Q7Z460 1538 aa13.8□□□□□ -0.2
SYNGAP1-212ENST00000636146 WRNQ14191 1432 aaPredicted RBP eCLIP13.8□□□□□ -0.2
SYNGAP1-212ENST00000636146 ABCA10Q8WWZ4 1543 aa13.8□□□□□ -0.2
SYNGAP1-212ENST00000636146 ABCA5Q8WWZ7 1642 aa13.75□□□□□ -0.21
SYNGAP1-212ENST00000636146 GRIN2AQ12879 1464 aa13.71□□□□□ -0.21
SYNGAP1-212ENST00000636146 TOP2BQ02880 1626 aa13.71□□□□□ -0.22
SYNGAP1-212ENST00000636146 BIVM-ERCC5R4GMW8 1640 aa13.69□□□□□ -0.22
SYNGAP1-212ENST00000636146 ADAMTS12P58397 1594 aa13.67□□□□□ -0.22
SYNGAP1-212ENST00000636146 FHAD1B1AJZ9 1412 aa13.67□□□□□ -0.22
SYNGAP1-212ENST00000636146 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
SYNGAP1-212ENST00000636146 CEP170Q5SW79 1584 aa13.62□□□□□ -0.23
SYNGAP1-212ENST00000636146 AEBP2Q6ZN18 517 aaPredicted RBP13.62□□□□□ -0.23
SYNGAP1-212ENST00000636146 NUP160Q12769 1436 aa13.62□□□□□ -0.23
SYNGAP1-212ENST00000636146 ERCC6L2Q5T890 1561 aa13.58□□□□□ -0.23
SYNGAP1-212ENST00000636146 NPM1P06748 294 aaKnown RBP eCLIP13.58□□□□□ -0.24
SYNGAP1-212ENST00000636146 JPH4Q96JJ6 628 aa13.58□□□□□ -0.24
SYNGAP1-212ENST00000636146 PRG4Q92954 1404 aaPredicted RBP13.56□□□□□ -0.24
SYNGAP1-212ENST00000636146 SHROOM2Q13796 1616 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms