RNA–Protein interactions for RNA: ENST00000635876.1

CHRNB2-202, Transcript of cholinergic receptor nicotinic beta 2 subunit, humanhuman

TSL 5

Gene CHRNB2, Length 1,243 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2-202ENST00000635876 NISCHQ9Y2I1 1504 aa31.08■■■□□ 2.57
CHRNB2-202ENST00000635876 CHIC1Q5VXU3 224 aa29.74■■■□□ 2.35
CHRNB2-202ENST00000635876 AEBP2Q6ZN18 517 aaPredicted RBP29.57■■■□□ 2.32
CHRNB2-202ENST00000635876 ABCC9O60706 1549 aa28.04■■■□□ 2.08
CHRNB2-202ENST00000635876 CCDC180Q9P1Z9 1646 aa28.03■■■□□ 2.08
CHRNB2-202ENST00000635876 RB1CC1Q8TDY2 1594 aa26.71■■□□□ 1.87
CHRNB2-202ENST00000635876 NACADO15069 1562 aa26.47■■□□□ 1.83
CHRNB2-202ENST00000635876 PHF23Q9BUL5 403 aaPredicted RBP26.37■■□□□ 1.81
CHRNB2-202ENST00000635876 DNAJC5BQ9UF47 199 aa26.28■■□□□ 1.8
CHRNB2-202ENST00000635876 DCAF8L2P0C7V8 631 aa26.25■■□□□ 1.79
CHRNB2-202ENST00000635876 UNC13AQ9UPW8 1703 aa26.14■■□□□ 1.77
CHRNB2-202ENST00000635876 MYO15BQ96JP2 1530 aa26.04■■□□□ 1.76
CHRNB2-202ENST00000635876 PABPN1Q86U42 306 aaKnown RBP eCLIP26.03■■□□□ 1.76
CHRNB2-202ENST00000635876 BICRAQ9NZM4 1560 aa25.87■■□□□ 1.73
CHRNB2-202ENST00000635876 ZCCHC6Q5VYS8 1495 aaKnown RBP25.74■■□□□ 1.71
CHRNB2-202ENST00000635876 DCAF1Q9Y4B6 1507 aa25.68■■□□□ 1.7
CHRNB2-202ENST00000635876 SHROOM4Q9ULL8 1493 aa25.57■■□□□ 1.68
CHRNB2-202ENST00000635876 SCRIBQ14160 1630 aa25.51■■□□□ 1.67
CHRNB2-202ENST00000635876 CC2D2AQ9P2K1 1620 aa25.37■■□□□ 1.65
CHRNB2-202ENST00000635876 CECR2Q9BXF3 1484 aa25.28■■□□□ 1.64
CHRNB2-202ENST00000635876 EIF4G1Q04637 1599 aaKnown RBP25.27■■□□□ 1.64
CHRNB2-202ENST00000635876 SENP3Q9H4L4 574 aaPredicted RBP24.75■■□□□ 1.55
CHRNB2-202ENST00000635876 PLPPR3Q6T4P5 718 aa24.53■■□□□ 1.52
CHRNB2-202ENST00000635876 NCAPD3P42695 1498 aa24.38■■□□□ 1.49
CHRNB2-202ENST00000635876 SMARCA4P51532 1647 aa24.32■■□□□ 1.48
CHRNB2-202ENST00000635876 ATAD2BQ9ULI0 1458 aa24.3■■□□□ 1.48
CHRNB2-202ENST00000635876 SMARCA2P51531 1590 aa24.29■■□□□ 1.48
CHRNB2-202ENST00000635876 ERCC6Q03468 1493 aa24.27■■□□□ 1.48
CHRNB2-202ENST00000635876 HMGXB3Q12766 1538 aa24.25■■□□□ 1.47
CHRNB2-202ENST00000635876 DNAJC5Q9H3Z4 198 aa24.25■■□□□ 1.47
CHRNB2-202ENST00000635876 CUX2O14529 1486 aa24.24■■□□□ 1.47
CHRNB2-202ENST00000635876 BAZ1AQ9NRL2 1556 aaPredicted RBP24.17■■□□□ 1.46
CHRNB2-202ENST00000635876 BAZ1BQ9UIG0 1483 aaKnown RBP24.11■■□□□ 1.45
CHRNB2-202ENST00000635876 PEG3Q9GZU2 1588 aa24.05■■□□□ 1.44
CHRNB2-202ENST00000635876 NESP48681 1621 aa24.04■■□□□ 1.44
CHRNB2-202ENST00000635876 MROH2BQ7Z745 1585 aa23.93■■□□□ 1.42
CHRNB2-202ENST00000635876 LAMC3Q9Y6N6 1575 aa23.92■■□□□ 1.42
CHRNB2-202ENST00000635876 THOC2Q8NI27 1593 aaKnown RBP23.89■■□□□ 1.41
CHRNB2-202ENST00000635876 KIF21AQ7Z4S6 1674 aa23.83■■□□□ 1.4
CHRNB2-202ENST00000635876 PDS5BQ9NTI5 1447 aa23.76■■□□□ 1.39
CHRNB2-202ENST00000635876 WIZO95785 1651 aa23.69■■□□□ 1.38
CHRNB2-202ENST00000635876 CADPSQ9ULU8 1353 aa23.63■■□□□ 1.37
CHRNB2-202ENST00000635876 MRC2Q9UBG0 1479 aa23.57■■□□□ 1.36
CHRNB2-202ENST00000635876 WDR62O43379 1518 aa23.52■■□□□ 1.36
CHRNB2-202ENST00000635876 CEP164Q9UPV0 1460 aa23.47■■□□□ 1.35
CHRNB2-202ENST00000635876 FANCD2Q9BXW9 1451 aa23.41■■□□□ 1.34
CHRNB2-202ENST00000635876 TOP2AP11388 1531 aaKnown RBP23.38■■□□□ 1.33
CHRNB2-202ENST00000635876 RSF1Q96T23 1441 aaPredicted RBP23.37■■□□□ 1.33
CHRNB2-202ENST00000635876 CFTRP13569 1480 aa23.35■■□□□ 1.33
CHRNB2-202ENST00000635876 PRDM2Q13029 1718 aa23.27■■□□□ 1.32
CHRNB2-202ENST00000635876 URB2Q14146 1524 aaKnown RBP23.21■■□□□ 1.31
CHRNB2-202ENST00000635876 TRIM41Q8WV44 630 aa23.2■■□□□ 1.3
CHRNB2-202ENST00000635876 ADRA2BP18089 450 aa23.14■■□□□ 1.29
CHRNB2-202ENST00000635876 CCDC88BA6NC98 1476 aa23.07■■□□□ 1.28
CHRNB2-202ENST00000635876 OSCARQ8IYS5 282 aa23.05■■□□□ 1.28
CHRNB2-202ENST00000635876 IFT140Q96RY7 1462 aa22.98■■□□□ 1.27
CHRNB2-202ENST00000635876 FOXD1Q16676 465 aa22.97■■□□□ 1.27
CHRNB2-202ENST00000635876 PPP6R1Q9UPN7 881 aa22.96■■□□□ 1.27
CHRNB2-202ENST00000635876 TOPBP1Q92547 1522 aa22.95■■□□□ 1.26
CHRNB2-202ENST00000635876 ZNF608Q9ULD9 1512 aaPredicted RBP22.92■■□□□ 1.26
CHRNB2-202ENST00000635876 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
CHRNB2-202ENST00000635876 DNMBPQ6XZF7 1577 aa22.89■■□□□ 1.26
CHRNB2-202ENST00000635876 EIF4G3O43432 1585 aaKnown RBP22.88■■□□□ 1.25
CHRNB2-202ENST00000635876 RIMBP3CA6NJZ7 1639 aa22.85■■□□□ 1.25
CHRNB2-202ENST00000635876 RIMBP3BA6NNM3 1639 aa22.85■■□□□ 1.25
CHRNB2-202ENST00000635876 RIMBP3Q9UFD9 1639 aa22.85■■□□□ 1.25
CHRNB2-202ENST00000635876 TARBP1Q13395 1621 aaKnown RBP22.77■■□□□ 1.24
CHRNB2-202ENST00000635876 CHD1O14646 1710 aa22.75■■□□□ 1.23
CHRNB2-202ENST00000635876 ARHGEF11O15085 1522 aa22.74■■□□□ 1.23
CHRNB2-202ENST00000635876 AQRO60306 1485 aaKnown RBP eCLIP22.7■■□□□ 1.22
CHRNB2-202ENST00000635876 POLA1P09884 1462 aaPredicted RBP22.7■■□□□ 1.22
CHRNB2-202ENST00000635876 RAD54L2Q9Y4B4 1467 aa22.6■■□□□ 1.21
CHRNB2-202ENST00000635876 FBLN2P98095 1184 aa22.59■■□□□ 1.21
CHRNB2-202ENST00000635876 SOGA1O94964 1423 aa22.58■■□□□ 1.21
CHRNB2-202ENST00000635876 WDR97A6NE52 1622 aa22.58■■□□□ 1.21
CHRNB2-202ENST00000635876 FGD5Q6ZNL6 1462 aa22.55■■□□□ 1.2
CHRNB2-202ENST00000635876 TDRD9Q8NDG6 1382 aaKnown RBP22.52■■□□□ 1.2
CHRNB2-202ENST00000635876 KCNA4P22459 653 aa22.52■■□□□ 1.2
CHRNB2-202ENST00000635876 CYB5RLQ6IPT4 315 aa22.52■■□□□ 1.2
CHRNB2-202ENST00000635876 CUX1P39880 1505 aa22.51■■□□□ 1.19
CHRNB2-202ENST00000635876 SNAPC4Q5SXM2 1469 aa22.5■■□□□ 1.19
CHRNB2-202ENST00000635876 ARAP1Q96P48 1450 aa22.48■■□□□ 1.19
CHRNB2-202ENST00000635876 MAGI1Q96QZ7 1491 aaPredicted RBP22.45■■□□□ 1.18
CHRNB2-202ENST00000635876 SYNJ1O43426 1573 aa22.44■■□□□ 1.18
CHRNB2-202ENST00000635876 GRIN2BQ13224 1484 aa22.43■■□□□ 1.18
CHRNB2-202ENST00000635876 CLASP1Q7Z460 1538 aa22.42■■□□□ 1.18
CHRNB2-202ENST00000635876 PBRM1Q86U86 1689 aa22.42■■□□□ 1.18
CHRNB2-202ENST00000635876 CHMP7Q8WUX9 453 aaPredicted RBP22.39■■□□□ 1.17
CHRNB2-202ENST00000635876 SYNJ2O15056 1496 aa22.36■■□□□ 1.17
CHRNB2-202ENST00000635876 TRHP20396 242 aaPredicted RBP22.34■■□□□ 1.17
CHRNB2-202ENST00000635876 GAPVD1Q14C86 1478 aa22.32■■□□□ 1.16
CHRNB2-202ENST00000635876 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
CHRNB2-202ENST00000635876 ABCA10Q8WWZ4 1543 aa22.29■■□□□ 1.16
CHRNB2-202ENST00000635876 SUPT5HO00267 1087 aaKnown RBP22.26■■□□□ 1.15
CHRNB2-202ENST00000635876 EHMT2Q96KQ7 1210 aa22.19■■□□□ 1.14
CHRNB2-202ENST00000635876 BIVM-ERCC5R4GMW8 1640 aa22.18■■□□□ 1.14
CHRNB2-202ENST00000635876 WRNQ14191 1432 aaPredicted RBP eCLIP22.18■■□□□ 1.14
CHRNB2-202ENST00000635876 ADAMTS12P58397 1594 aa22.16■■□□□ 1.14
CHRNB2-202ENST00000635876 TOP2BQ02880 1626 aa22.15■■□□□ 1.14
CHRNB2-202ENST00000635876 GRIN2AQ12879 1464 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms