RNA–Protein interactions for RNA: ENST00000635556.1

LINC01646-203, Transcript of long intergenic non-protein coding RNA 1646, humanhuman

TSL 5

Gene LINC01646, Length 914 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01646-203ENST00000635556 NISCHQ9Y2I1 1504 aa23.03■■□□□ 1.28
LINC01646-203ENST00000635556 CCDC180Q9P1Z9 1646 aa20.33■□□□□ 0.84
LINC01646-203ENST00000635556 AEBP2Q6ZN18 517 aaPredicted RBP19.56■□□□□ 0.72
LINC01646-203ENST00000635556 CHIC1Q5VXU3 224 aa19.42■□□□□ 0.7
LINC01646-203ENST00000635556 ZCCHC6Q5VYS8 1495 aaKnown RBP19.35■□□□□ 0.69
LINC01646-203ENST00000635556 ABCC9O60706 1549 aa19.3■□□□□ 0.68
LINC01646-203ENST00000635556 DCAF1Q9Y4B6 1507 aa19.14■□□□□ 0.65
LINC01646-203ENST00000635556 MYO15BQ96JP2 1530 aa19.05■□□□□ 0.64
LINC01646-203ENST00000635556 NACADO15069 1562 aa18.95■□□□□ 0.62
LINC01646-203ENST00000635556 RB1CC1Q8TDY2 1594 aa18.84■□□□□ 0.61
LINC01646-203ENST00000635556 DCAF8L2P0C7V8 631 aa18.83■□□□□ 0.6
LINC01646-203ENST00000635556 SCRIBQ14160 1630 aa18.52■□□□□ 0.55
LINC01646-203ENST00000635556 UNC13AQ9UPW8 1703 aa18.43■□□□□ 0.54
LINC01646-203ENST00000635556 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.53
LINC01646-203ENST00000635556 BICRAQ9NZM4 1560 aa18.27■□□□□ 0.52
LINC01646-203ENST00000635556 PABPN1Q86U42 306 aaKnown RBP eCLIP18.04■□□□□ 0.48
LINC01646-203ENST00000635556 CECR2Q9BXF3 1484 aa17.85■□□□□ 0.45
LINC01646-203ENST00000635556 BAZ1AQ9NRL2 1556 aaPredicted RBP17.83■□□□□ 0.45
LINC01646-203ENST00000635556 SMARCA4P51532 1647 aa17.79■□□□□ 0.44
LINC01646-203ENST00000635556 MROH2BQ7Z745 1585 aa17.74■□□□□ 0.43
LINC01646-203ENST00000635556 EIF4G1Q04637 1599 aaKnown RBP17.74■□□□□ 0.43
LINC01646-203ENST00000635556 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
LINC01646-203ENST00000635556 PEG3Q9GZU2 1588 aa17.65■□□□□ 0.42
LINC01646-203ENST00000635556 WIZO95785 1651 aa17.58■□□□□ 0.4
LINC01646-203ENST00000635556 SMARCA2P51531 1590 aa17.57■□□□□ 0.4
LINC01646-203ENST00000635556 ATAD2BQ9ULI0 1458 aa17.54■□□□□ 0.4
LINC01646-203ENST00000635556 CC2D2AQ9P2K1 1620 aa17.52■□□□□ 0.4
LINC01646-203ENST00000635556 SUPT5HO00267 1087 aaKnown RBP17.49■□□□□ 0.39
LINC01646-203ENST00000635556 TOP2AP11388 1531 aaKnown RBP17.47■□□□□ 0.39
LINC01646-203ENST00000635556 HMGXB3Q12766 1538 aa17.47■□□□□ 0.39
LINC01646-203ENST00000635556 NCAPD3P42695 1498 aa17.46■□□□□ 0.39
LINC01646-203ENST00000635556 BAZ1BQ9UIG0 1483 aaKnown RBP17.42■□□□□ 0.38
LINC01646-203ENST00000635556 DNAJC5BQ9UF47 199 aa17.2■□□□□ 0.34
LINC01646-203ENST00000635556 CCDC88BA6NC98 1476 aa17.19■□□□□ 0.34
LINC01646-203ENST00000635556 PHF23Q9BUL5 403 aaPredicted RBP17.13■□□□□ 0.33
LINC01646-203ENST00000635556 CFTRP13569 1480 aa16.99■□□□□ 0.31
LINC01646-203ENST00000635556 PRDM2Q13029 1718 aa16.96■□□□□ 0.3
LINC01646-203ENST00000635556 LAMC3Q9Y6N6 1575 aa16.94■□□□□ 0.3
LINC01646-203ENST00000635556 CADPSQ9ULU8 1353 aa16.94■□□□□ 0.3
LINC01646-203ENST00000635556 NESP48681 1621 aa16.85■□□□□ 0.29
LINC01646-203ENST00000635556 FANCD2Q9BXW9 1451 aa16.77■□□□□ 0.28
LINC01646-203ENST00000635556 PDS5BQ9NTI5 1447 aa16.76■□□□□ 0.27
LINC01646-203ENST00000635556 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
LINC01646-203ENST00000635556 CEP164Q9UPV0 1460 aa16.72■□□□□ 0.27
LINC01646-203ENST00000635556 KIF21AQ7Z4S6 1674 aa16.72■□□□□ 0.27
LINC01646-203ENST00000635556 WRNQ14191 1432 aaPredicted RBP eCLIP16.69■□□□□ 0.26
LINC01646-203ENST00000635556 SYNJ1O43426 1573 aa16.65■□□□□ 0.26
LINC01646-203ENST00000635556 BIVM-ERCC5R4GMW8 1640 aa16.65■□□□□ 0.26
LINC01646-203ENST00000635556 TOP2BQ02880 1626 aa16.63■□□□□ 0.25
LINC01646-203ENST00000635556 CUX1P39880 1505 aa16.63■□□□□ 0.25
LINC01646-203ENST00000635556 DNMBPQ6XZF7 1577 aa16.62■□□□□ 0.25
LINC01646-203ENST00000635556 ERCC6Q03468 1493 aa16.61■□□□□ 0.25
LINC01646-203ENST00000635556 MRC2Q9UBG0 1479 aa16.6■□□□□ 0.25
LINC01646-203ENST00000635556 URB2Q14146 1524 aaKnown RBP16.58■□□□□ 0.24
LINC01646-203ENST00000635556 THOC2Q8NI27 1593 aaKnown RBP16.58■□□□□ 0.24
LINC01646-203ENST00000635556 TOPBP1Q92547 1522 aa16.57■□□□□ 0.24
LINC01646-203ENST00000635556 WDR62O43379 1518 aa16.56■□□□□ 0.24
LINC01646-203ENST00000635556 TRIM41Q8WV44 630 aa16.53■□□□□ 0.24
LINC01646-203ENST00000635556 SENP3Q9H4L4 574 aaPredicted RBP16.53■□□□□ 0.24
LINC01646-203ENST00000635556 FGD5Q6ZNL6 1462 aa16.49■□□□□ 0.23
LINC01646-203ENST00000635556 POLA1P09884 1462 aaPredicted RBP16.47■□□□□ 0.23
LINC01646-203ENST00000635556 WDR97A6NE52 1622 aa16.41■□□□□ 0.22
LINC01646-203ENST00000635556 ABCA10Q8WWZ4 1543 aa16.38■□□□□ 0.21
LINC01646-203ENST00000635556 CUX2O14529 1486 aa16.37■□□□□ 0.21
LINC01646-203ENST00000635556 TARBP1Q13395 1621 aaKnown RBP16.37■□□□□ 0.21
LINC01646-203ENST00000635556 SOGA1O94964 1423 aa16.35■□□□□ 0.21
LINC01646-203ENST00000635556 IFT140Q96RY7 1462 aa16.35■□□□□ 0.21
LINC01646-203ENST00000635556 RAD54L2Q9Y4B4 1467 aa16.35■□□□□ 0.21
LINC01646-203ENST00000635556 EEA1Q15075 1411 aa16.34■□□□□ 0.21
LINC01646-203ENST00000635556 ABCA5Q8WWZ7 1642 aa16.3■□□□□ 0.2
LINC01646-203ENST00000635556 KIF27Q86VH2 1401 aa16.29■□□□□ 0.2
LINC01646-203ENST00000635556 RUSC2Q8N2Y8 1516 aa16.26■□□□□ 0.19
LINC01646-203ENST00000635556 EIF4G3O43432 1585 aaKnown RBP16.22■□□□□ 0.19
LINC01646-203ENST00000635556 ZNF608Q9ULD9 1512 aaPredicted RBP16.2■□□□□ 0.18
LINC01646-203ENST00000635556 GAPVD1Q14C86 1478 aa16.2■□□□□ 0.18
LINC01646-203ENST00000635556 ERICH3Q5RHP9 1530 aa16.19■□□□□ 0.18
LINC01646-203ENST00000635556 PBRM1Q86U86 1689 aa16.19■□□□□ 0.18
LINC01646-203ENST00000635556 TDRD9Q8NDG6 1382 aaKnown RBP16.17■□□□□ 0.18
LINC01646-203ENST00000635556 KIF21BO75037 1637 aa16.16■□□□□ 0.18
LINC01646-203ENST00000635556 CUL7Q14999 1698 aa16.15■□□□□ 0.18
LINC01646-203ENST00000635556 GRIN2BQ13224 1484 aa16.15■□□□□ 0.18
LINC01646-203ENST00000635556 CSRNP3Q8WYN3 585 aa16.14■□□□□ 0.17
LINC01646-203ENST00000635556 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.17
LINC01646-203ENST00000635556 PRXQ9BXM0 1461 aa16.14■□□□□ 0.17
LINC01646-203ENST00000635556 FAM9AQ8IZU1 332 aaPredicted RBP16.13■□□□□ 0.17
LINC01646-203ENST00000635556 IGF1RP08069 1367 aa16.13■□□□□ 0.17
LINC01646-203ENST00000635556 ADAMTS12P58397 1594 aa16.11■□□□□ 0.17
LINC01646-203ENST00000635556 MAGI1Q96QZ7 1491 aaPredicted RBP16.08■□□□□ 0.16
LINC01646-203ENST00000635556 GOLGA3Q08378 1498 aa16.07■□□□□ 0.16
LINC01646-203ENST00000635556 SNAPC4Q5SXM2 1469 aa16.06■□□□□ 0.16
LINC01646-203ENST00000635556 CARMIL1Q5VZK9 1371 aa16.05■□□□□ 0.16
LINC01646-203ENST00000635556 RAPGEF2Q9Y4G8 1499 aa16.04■□□□□ 0.16
LINC01646-203ENST00000635556 FHAD1B1AJZ9 1412 aa16.04■□□□□ 0.16
LINC01646-203ENST00000635556 SYNJ2O15056 1496 aa15.99■□□□□ 0.15
LINC01646-203ENST00000635556 GRIN2AQ12879 1464 aa15.96■□□□□ 0.14
LINC01646-203ENST00000635556 TNIKQ9UKE5 1360 aa15.93■□□□□ 0.14
LINC01646-203ENST00000635556 PLPPR3Q6T4P5 718 aa15.92■□□□□ 0.14
LINC01646-203ENST00000635556 CTTNBP2Q8WZ74 1663 aa15.92■□□□□ 0.14
LINC01646-203ENST00000635556 LOC105371045A0A1W2PR82 267 aa15.91■□□□□ 0.14
LINC01646-203ENST00000635556 CHD1O14646 1710 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms