RNA–Protein interactions for RNA: ENST00000635206.1

CCDC149-208, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC149, Length 2,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-208ENST00000635206 NISCHQ9Y2I1 1504 aa30.1■■■□□ 2.41
CCDC149-208ENST00000635206 CCDC180Q9P1Z9 1646 aa26.18■■□□□ 1.78
CCDC149-208ENST00000635206 ZCCHC6Q5VYS8 1495 aaKnown RBP25.31■■□□□ 1.64
CCDC149-208ENST00000635206 DCAF8L2P0C7V8 631 aa24.97■■□□□ 1.59
CCDC149-208ENST00000635206 DCAF1Q9Y4B6 1507 aa24.87■■□□□ 1.57
CCDC149-208ENST00000635206 SHROOM4Q9ULL8 1493 aa24.86■■□□□ 1.57
CCDC149-208ENST00000635206 ABCC9O60706 1549 aa24.69■■□□□ 1.54
CCDC149-208ENST00000635206 MYO15BQ96JP2 1530 aa24.55■■□□□ 1.52
CCDC149-208ENST00000635206 NACADO15069 1562 aa24.35■■□□□ 1.49
CCDC149-208ENST00000635206 SCRIBQ14160 1630 aa24.15■■□□□ 1.46
CCDC149-208ENST00000635206 RB1CC1Q8TDY2 1594 aa24.11■■□□□ 1.45
CCDC149-208ENST00000635206 SUPT5HO00267 1087 aaKnown RBP23.99■■□□□ 1.43
CCDC149-208ENST00000635206 UNC13AQ9UPW8 1703 aa23.67■■□□□ 1.38
CCDC149-208ENST00000635206 CECR2Q9BXF3 1484 aa23.47■■□□□ 1.35
CCDC149-208ENST00000635206 RSF1Q96T23 1441 aaPredicted RBP23.46■■□□□ 1.35
CCDC149-208ENST00000635206 BICRAQ9NZM4 1560 aa23.43■■□□□ 1.34
CCDC149-208ENST00000635206 PABPN1Q86U42 306 aaKnown RBP eCLIP23.38■■□□□ 1.33
CCDC149-208ENST00000635206 MROH2BQ7Z745 1585 aa23.32■■□□□ 1.32
CCDC149-208ENST00000635206 BAZ1AQ9NRL2 1556 aaPredicted RBP23.19■■□□□ 1.3
CCDC149-208ENST00000635206 WIZO95785 1651 aa23.14■■□□□ 1.29
CCDC149-208ENST00000635206 SMARCA4P51532 1647 aa23.09■■□□□ 1.29
CCDC149-208ENST00000635206 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
CCDC149-208ENST00000635206 TOP2AP11388 1531 aaKnown RBP22.83■■□□□ 1.25
CCDC149-208ENST00000635206 PEG3Q9GZU2 1588 aa22.83■■□□□ 1.25
CCDC149-208ENST00000635206 ATAD2BQ9ULI0 1458 aa22.7■■□□□ 1.22
CCDC149-208ENST00000635206 EIF4G1Q04637 1599 aaKnown RBP22.69■■□□□ 1.22
CCDC149-208ENST00000635206 CCDC88BA6NC98 1476 aa22.66■■□□□ 1.22
CCDC149-208ENST00000635206 SMARCA2P51531 1590 aa22.66■■□□□ 1.22
CCDC149-208ENST00000635206 BAZ1BQ9UIG0 1483 aaKnown RBP22.57■■□□□ 1.2
CCDC149-208ENST00000635206 NCAPD3P42695 1498 aa22.47■■□□□ 1.19
CCDC149-208ENST00000635206 HMGXB3Q12766 1538 aa22.47■■□□□ 1.19
CCDC149-208ENST00000635206 TRIM41Q8WV44 630 aa22.46■■□□□ 1.19
CCDC149-208ENST00000635206 CC2D2AQ9P2K1 1620 aa22.32■■□□□ 1.16
CCDC149-208ENST00000635206 ABCC8Q09428 1581 aa22.29■■□□□ 1.16
CCDC149-208ENST00000635206 LOC105371045A0A1W2PR82 267 aa22.21■■□□□ 1.15
CCDC149-208ENST00000635206 FAM9AQ8IZU1 332 aaPredicted RBP22.17■■□□□ 1.14
CCDC149-208ENST00000635206 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.12
CCDC149-208ENST00000635206 CFTRP13569 1480 aa22■■□□□ 1.11
CCDC149-208ENST00000635206 SYNJ1O43426 1573 aa21.99■■□□□ 1.11
CCDC149-208ENST00000635206 EHMT2Q96KQ7 1210 aa21.93■■□□□ 1.1
CCDC149-208ENST00000635206 SOGA1O94964 1423 aa21.91■■□□□ 1.1
CCDC149-208ENST00000635206 PRDM2Q13029 1718 aa21.91■■□□□ 1.1
CCDC149-208ENST00000635206 CADPSQ9ULU8 1353 aa21.9■■□□□ 1.1
CCDC149-208ENST00000635206 DNAJC5BQ9UF47 199 aa21.85■■□□□ 1.09
CCDC149-208ENST00000635206 RUSC2Q8N2Y8 1516 aa21.84■■□□□ 1.09
CCDC149-208ENST00000635206 TOP2BQ02880 1626 aa21.82■■□□□ 1.08
CCDC149-208ENST00000635206 CUX1P39880 1505 aa21.78■■□□□ 1.08
CCDC149-208ENST00000635206 BIVM-ERCC5R4GMW8 1640 aa21.77■■□□□ 1.08
CCDC149-208ENST00000635206 EEA1Q15075 1411 aa21.74■■□□□ 1.07
CCDC149-208ENST00000635206 NESP48681 1621 aa21.74■■□□□ 1.07
CCDC149-208ENST00000635206 CSRNP3Q8WYN3 585 aa21.73■■□□□ 1.07
CCDC149-208ENST00000635206 LAMC3Q9Y6N6 1575 aa21.69■■□□□ 1.06
CCDC149-208ENST00000635206 FANCD2Q9BXW9 1451 aa21.68■■□□□ 1.06
CCDC149-208ENST00000635206 GOLGA3Q08378 1498 aa21.51■■□□□ 1.03
CCDC149-208ENST00000635206 FGD5Q6ZNL6 1462 aa21.51■■□□□ 1.03
CCDC149-208ENST00000635206 UBTFP17480 764 aaKnown RBP21.5■■□□□ 1.03
CCDC149-208ENST00000635206 CEP164Q9UPV0 1460 aa21.49■■□□□ 1.03
CCDC149-208ENST00000635206 PDS5BQ9NTI5 1447 aa21.49■■□□□ 1.03
CCDC149-208ENST00000635206 TNIKQ9UKE5 1360 aa21.49■■□□□ 1.03
CCDC149-208ENST00000635206 KIF21BO75037 1637 aa21.49■■□□□ 1.03
CCDC149-208ENST00000635206 DNMBPQ6XZF7 1577 aa21.48■■□□□ 1.03
CCDC149-208ENST00000635206 KIF27Q86VH2 1401 aa21.46■■□□□ 1.03
CCDC149-208ENST00000635206 TOPBP1Q92547 1522 aa21.46■■□□□ 1.03
CCDC149-208ENST00000635206 RAPGEF2Q9Y4G8 1499 aa21.43■■□□□ 1.02
CCDC149-208ENST00000635206 KIF21AQ7Z4S6 1674 aa21.43■■□□□ 1.02
CCDC149-208ENST00000635206 CEP162Q5TB80 1403 aa21.43■■□□□ 1.02
CCDC149-208ENST00000635206 URB2Q14146 1524 aaKnown RBP21.42■■□□□ 1.02
CCDC149-208ENST00000635206 CUX2O14529 1486 aa21.42■■□□□ 1.02
CCDC149-208ENST00000635206 POLA1P09884 1462 aaPredicted RBP21.37■■□□□ 1.01
CCDC149-208ENST00000635206 PRXQ9BXM0 1461 aa21.37■■□□□ 1.01
CCDC149-208ENST00000635206 RAD54L2Q9Y4B4 1467 aa21.37■■□□□ 1.01
CCDC149-208ENST00000635206 PCGF6Q9BYE7 350 aa21.34■■□□□ 1.01
CCDC149-208ENST00000635206 IGF1RP08069 1367 aa21.3■■□□□ 1
CCDC149-208ENST00000635206 ERICH3Q5RHP9 1530 aa21.3■■□□□ 1
CCDC149-208ENST00000635206 ABCA10Q8WWZ4 1543 aa21.28■■□□□ 1
CCDC149-208ENST00000635206 MRC2Q9UBG0 1479 aa21.23■□□□□ 0.99
CCDC149-208ENST00000635206 WDR97A6NE52 1622 aa21.23■□□□□ 0.99
CCDC149-208ENST00000635206 RANGAP1P46060 587 aaPredicted RBP21.22■□□□□ 0.99
CCDC149-208ENST00000635206 PPARGC1BQ86YN6 1023 aaKnown RBP21.22■□□□□ 0.99
CCDC149-208ENST00000635206 CLIP1P30622 1438 aa21.21■□□□□ 0.99
CCDC149-208ENST00000635206 TRIM26Q12899 539 aaPredicted RBP21.21■□□□□ 0.99
CCDC149-208ENST00000635206 CARMIL1Q5VZK9 1371 aa21.19■□□□□ 0.98
CCDC149-208ENST00000635206 TDRD9Q8NDG6 1382 aaKnown RBP21.15■□□□□ 0.98
CCDC149-208ENST00000635206 WDR62O43379 1518 aa21.14■□□□□ 0.98
CCDC149-208ENST00000635206 TARBP1Q13395 1621 aaKnown RBP21.13■□□□□ 0.97
CCDC149-208ENST00000635206 ABCA5Q8WWZ7 1642 aa21.11■□□□□ 0.97
CCDC149-208ENST00000635206 ERCC6Q03468 1493 aa21.1■□□□□ 0.97
CCDC149-208ENST00000635206 THOC2Q8NI27 1593 aaKnown RBP21.08■□□□□ 0.96
CCDC149-208ENST00000635206 GAPVD1Q14C86 1478 aa21.06■□□□□ 0.96
CCDC149-208ENST00000635206 CUL7Q14999 1698 aa21.03■□□□□ 0.96
CCDC149-208ENST00000635206 VPS8Q8N3P4 1428 aa21.03■□□□□ 0.96
CCDC149-208ENST00000635206 TTBK1Q5TCY1 1321 aaPredicted RBP21.01■□□□□ 0.95
CCDC149-208ENST00000635206 ARAP1Q96P48 1450 aa21■□□□□ 0.95
CCDC149-208ENST00000635206 IFT140Q96RY7 1462 aa20.98■□□□□ 0.95
CCDC149-208ENST00000635206 AQRO60306 1485 aaKnown RBP eCLIP20.98■□□□□ 0.95
CCDC149-208ENST00000635206 ARHGAP35Q9NRY4 1499 aa20.96■□□□□ 0.95
CCDC149-208ENST00000635206 ZNF608Q9ULD9 1512 aaPredicted RBP20.93■□□□□ 0.94
CCDC149-208ENST00000635206 PBRM1Q86U86 1689 aa20.92■□□□□ 0.94
CCDC149-208ENST00000635206 GRIN2BQ13224 1484 aa20.85■□□□□ 0.93
CCDC149-208ENST00000635206 APLP2Q06481 763 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms