RNA–Protein interactions for RNA: ENST00000634718.1

UBASH3A-206, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 3

Gene UBASH3A, Length 696 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-206ENST00000634718 NISCHQ9Y2I1 1504 aa26.85■■□□□ 1.89
UBASH3A-206ENST00000634718 CCDC180Q9P1Z9 1646 aa23.99■■□□□ 1.43
UBASH3A-206ENST00000634718 ABCC9O60706 1549 aa23.48■■□□□ 1.35
UBASH3A-206ENST00000634718 RB1CC1Q8TDY2 1594 aa22.62■■□□□ 1.21
UBASH3A-206ENST00000634718 NACADO15069 1562 aa22.57■■□□□ 1.2
UBASH3A-206ENST00000634718 MYO15BQ96JP2 1530 aa22.44■■□□□ 1.18
UBASH3A-206ENST00000634718 DCAF8L2P0C7V8 631 aa22.37■■□□□ 1.17
UBASH3A-206ENST00000634718 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
UBASH3A-206ENST00000634718 DCAF1Q9Y4B6 1507 aa22.28■■□□□ 1.16
UBASH3A-206ENST00000634718 UNC13AQ9UPW8 1703 aa22.11■■□□□ 1.13
UBASH3A-206ENST00000634718 BICRAQ9NZM4 1560 aa21.91■■□□□ 1.1
UBASH3A-206ENST00000634718 PABPN1Q86U42 306 aaKnown RBP eCLIP21.88■■□□□ 1.09
UBASH3A-206ENST00000634718 SCRIBQ14160 1630 aa21.77■■□□□ 1.08
UBASH3A-206ENST00000634718 SHROOM4Q9ULL8 1493 aa21.76■■□□□ 1.07
UBASH3A-206ENST00000634718 DNAJC5BQ9UF47 199 aa21.66■■□□□ 1.06
UBASH3A-206ENST00000634718 EIF4G1Q04637 1599 aaKnown RBP21.35■■□□□ 1.01
UBASH3A-206ENST00000634718 CC2D2AQ9P2K1 1620 aa21.29■■□□□ 1
UBASH3A-206ENST00000634718 CECR2Q9BXF3 1484 aa21.14■□□□□ 0.98
UBASH3A-206ENST00000634718 SMARCA4P51532 1647 aa20.86■□□□□ 0.93
UBASH3A-206ENST00000634718 BAZ1AQ9NRL2 1556 aaPredicted RBP20.84■□□□□ 0.93
UBASH3A-206ENST00000634718 NCAPD3P42695 1498 aa20.81■□□□□ 0.92
UBASH3A-206ENST00000634718 SMARCA2P51531 1590 aa20.77■□□□□ 0.92
UBASH3A-206ENST00000634718 ATAD2BQ9ULI0 1458 aa20.77■□□□□ 0.92
UBASH3A-206ENST00000634718 HMGXB3Q12766 1538 aa20.71■□□□□ 0.91
UBASH3A-206ENST00000634718 PEG3Q9GZU2 1588 aa20.71■□□□□ 0.91
UBASH3A-206ENST00000634718 MROH2BQ7Z745 1585 aa20.66■□□□□ 0.9
UBASH3A-206ENST00000634718 BAZ1BQ9UIG0 1483 aaKnown RBP20.59■□□□□ 0.89
UBASH3A-206ENST00000634718 WIZO95785 1651 aa20.44■□□□□ 0.86
UBASH3A-206ENST00000634718 RSF1Q96T23 1441 aaPredicted RBP20.38■□□□□ 0.85
UBASH3A-206ENST00000634718 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
UBASH3A-206ENST00000634718 NESP48681 1621 aa20.28■□□□□ 0.84
UBASH3A-206ENST00000634718 ERCC6Q03468 1493 aa20.26■□□□□ 0.83
UBASH3A-206ENST00000634718 TOP2AP11388 1531 aaKnown RBP20.24■□□□□ 0.83
UBASH3A-206ENST00000634718 CADPSQ9ULU8 1353 aa20.18■□□□□ 0.82
UBASH3A-206ENST00000634718 CUX2O14529 1486 aa20.17■□□□□ 0.82
UBASH3A-206ENST00000634718 PDS5BQ9NTI5 1447 aa20.14■□□□□ 0.81
UBASH3A-206ENST00000634718 KIF21AQ7Z4S6 1674 aa20.09■□□□□ 0.81
UBASH3A-206ENST00000634718 THOC2Q8NI27 1593 aaKnown RBP20.06■□□□□ 0.8
UBASH3A-206ENST00000634718 CFTRP13569 1480 aa20.05■□□□□ 0.8
UBASH3A-206ENST00000634718 SUPT5HO00267 1087 aaKnown RBP19.99■□□□□ 0.79
UBASH3A-206ENST00000634718 CCDC88BA6NC98 1476 aa19.97■□□□□ 0.79
UBASH3A-206ENST00000634718 PRDM2Q13029 1718 aa19.94■□□□□ 0.78
UBASH3A-206ENST00000634718 MRC2Q9UBG0 1479 aa19.93■□□□□ 0.78
UBASH3A-206ENST00000634718 FANCD2Q9BXW9 1451 aa19.92■□□□□ 0.78
UBASH3A-206ENST00000634718 CEP164Q9UPV0 1460 aa19.92■□□□□ 0.78
UBASH3A-206ENST00000634718 WDR62O43379 1518 aa19.89■□□□□ 0.77
UBASH3A-206ENST00000634718 URB2Q14146 1524 aaKnown RBP19.73■□□□□ 0.75
UBASH3A-206ENST00000634718 DNAJC5Q9H3Z4 198 aa19.68■□□□□ 0.74
UBASH3A-206ENST00000634718 ABCC8Q09428 1581 aa19.66■□□□□ 0.74
UBASH3A-206ENST00000634718 TOPBP1Q92547 1522 aa19.6■□□□□ 0.73
UBASH3A-206ENST00000634718 DNMBPQ6XZF7 1577 aa19.59■□□□□ 0.73
UBASH3A-206ENST00000634718 IFT140Q96RY7 1462 aa19.54■□□□□ 0.72
UBASH3A-206ENST00000634718 POLA1P09884 1462 aaPredicted RBP19.42■□□□□ 0.7
UBASH3A-206ENST00000634718 TARBP1Q13395 1621 aaKnown RBP19.42■□□□□ 0.7
UBASH3A-206ENST00000634718 ZNF608Q9ULD9 1512 aaPredicted RBP19.41■□□□□ 0.7
UBASH3A-206ENST00000634718 CUX1P39880 1505 aa19.39■□□□□ 0.69
UBASH3A-206ENST00000634718 EIF4G3O43432 1585 aaKnown RBP19.36■□□□□ 0.69
UBASH3A-206ENST00000634718 FGD5Q6ZNL6 1462 aa19.35■□□□□ 0.69
UBASH3A-206ENST00000634718 SOGA1O94964 1423 aa19.34■□□□□ 0.69
UBASH3A-206ENST00000634718 WDR97A6NE52 1622 aa19.33■□□□□ 0.68
UBASH3A-206ENST00000634718 RAD54L2Q9Y4B4 1467 aa19.3■□□□□ 0.68
UBASH3A-206ENST00000634718 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.68
UBASH3A-206ENST00000634718 OSCARQ8IYS5 282 aa19.27■□□□□ 0.68
UBASH3A-206ENST00000634718 BIVM-ERCC5R4GMW8 1640 aa19.24■□□□□ 0.67
UBASH3A-206ENST00000634718 TOP2BQ02880 1626 aa19.23■□□□□ 0.67
UBASH3A-206ENST00000634718 WRNQ14191 1432 aaPredicted RBP eCLIP19.22■□□□□ 0.67
UBASH3A-206ENST00000634718 TDRD9Q8NDG6 1382 aaKnown RBP19.21■□□□□ 0.67
UBASH3A-206ENST00000634718 ABCA10Q8WWZ4 1543 aa19.19■□□□□ 0.66
UBASH3A-206ENST00000634718 SYNJ1O43426 1573 aa19.18■□□□□ 0.66
UBASH3A-206ENST00000634718 CHD1O14646 1710 aa19.15■□□□□ 0.66
UBASH3A-206ENST00000634718 GRIN2BQ13224 1484 aa19.15■□□□□ 0.66
UBASH3A-206ENST00000634718 ABCA5Q8WWZ7 1642 aa19.12■□□□□ 0.65
UBASH3A-206ENST00000634718 MAGI1Q96QZ7 1491 aaPredicted RBP19.12■□□□□ 0.65
UBASH3A-206ENST00000634718 PBRM1Q86U86 1689 aa19.11■□□□□ 0.65
UBASH3A-206ENST00000634718 GAPVD1Q14C86 1478 aa19.11■□□□□ 0.65
UBASH3A-206ENST00000634718 SNAPC4Q5SXM2 1469 aa19.1■□□□□ 0.65
UBASH3A-206ENST00000634718 CHIC1Q5VXU3 224 aa19.05■□□□□ 0.64
UBASH3A-206ENST00000634718 SYNJ2O15056 1496 aa19.04■□□□□ 0.64
UBASH3A-206ENST00000634718 FBLN2P98095 1184 aa19.03■□□□□ 0.64
UBASH3A-206ENST00000634718 CHMP7Q8WUX9 453 aaPredicted RBP19.01■□□□□ 0.63
UBASH3A-206ENST00000634718 RIMBP3CA6NJZ7 1639 aa18.98■□□□□ 0.63
UBASH3A-206ENST00000634718 RIMBP3BA6NNM3 1639 aa18.98■□□□□ 0.63
UBASH3A-206ENST00000634718 RIMBP3Q9UFD9 1639 aa18.98■□□□□ 0.63
UBASH3A-206ENST00000634718 ERICH3Q5RHP9 1530 aa18.97■□□□□ 0.63
UBASH3A-206ENST00000634718 ARHGEF11O15085 1522 aa18.95■□□□□ 0.62
UBASH3A-206ENST00000634718 CLASP1Q7Z460 1538 aa18.95■□□□□ 0.62
UBASH3A-206ENST00000634718 ADAMTS12P58397 1594 aa18.93■□□□□ 0.62
UBASH3A-206ENST00000634718 FHAD1B1AJZ9 1412 aa18.91■□□□□ 0.62
UBASH3A-206ENST00000634718 GRIN2AQ12879 1464 aa18.89■□□□□ 0.61
UBASH3A-206ENST00000634718 TRIM41Q8WV44 630 aa18.87■□□□□ 0.61
UBASH3A-206ENST00000634718 KIF27Q86VH2 1401 aa18.84■□□□□ 0.61
UBASH3A-206ENST00000634718 NUP160Q12769 1436 aa18.83■□□□□ 0.6
UBASH3A-206ENST00000634718 CEP170Q5SW79 1584 aa18.8■□□□□ 0.6
UBASH3A-206ENST00000634718 CUL7Q14999 1698 aa18.78■□□□□ 0.6
UBASH3A-206ENST00000634718 IGF1RP08069 1367 aa18.78■□□□□ 0.6
UBASH3A-206ENST00000634718 ARAP1Q96P48 1450 aa18.77■□□□□ 0.6
UBASH3A-206ENST00000634718 CYB5RLQ6IPT4 315 aa18.74■□□□□ 0.59
UBASH3A-206ENST00000634718 SHROOM2Q13796 1616 aa18.73■□□□□ 0.59
UBASH3A-206ENST00000634718 RUSC2Q8N2Y8 1516 aa18.66■□□□□ 0.58
UBASH3A-206ENST00000634718 CARMIL1Q5VZK9 1371 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms