RNA–Protein interactions for RNA: ENST00000634222.1

CPNE5-208, Transcript of copine 5, humanhuman

TSL 2

Gene CPNE5, Length 2,182 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5-208ENST00000634222 NISCHQ9Y2I1 1504 aa30.92■■■□□ 2.54
CPNE5-208ENST00000634222 CCDC180Q9P1Z9 1646 aa26.73■■□□□ 1.87
CPNE5-208ENST00000634222 ZCCHC6Q5VYS8 1495 aaKnown RBP26.05■■□□□ 1.76
CPNE5-208ENST00000634222 SHROOM4Q9ULL8 1493 aa25.67■■□□□ 1.7
CPNE5-208ENST00000634222 DCAF8L2P0C7V8 631 aa25.6■■□□□ 1.69
CPNE5-208ENST00000634222 DCAF1Q9Y4B6 1507 aa25.46■■□□□ 1.67
CPNE5-208ENST00000634222 ABCC9O60706 1549 aa25.18■■□□□ 1.62
CPNE5-208ENST00000634222 MYO15BQ96JP2 1530 aa25.01■■□□□ 1.59
CPNE5-208ENST00000634222 NACADO15069 1562 aa24.83■■□□□ 1.57
CPNE5-208ENST00000634222 SUPT5HO00267 1087 aaKnown RBP24.81■■□□□ 1.56
CPNE5-208ENST00000634222 SCRIBQ14160 1630 aa24.8■■□□□ 1.56
CPNE5-208ENST00000634222 RB1CC1Q8TDY2 1594 aa24.56■■□□□ 1.52
CPNE5-208ENST00000634222 UNC13AQ9UPW8 1703 aa24.18■■□□□ 1.46
CPNE5-208ENST00000634222 RSF1Q96T23 1441 aaPredicted RBP24.15■■□□□ 1.46
CPNE5-208ENST00000634222 CECR2Q9BXF3 1484 aa24.11■■□□□ 1.45
CPNE5-208ENST00000634222 MROH2BQ7Z745 1585 aa23.97■■□□□ 1.43
CPNE5-208ENST00000634222 BICRAQ9NZM4 1560 aa23.9■■□□□ 1.42
CPNE5-208ENST00000634222 CHIC1Q5VXU3 224 aa23.86■■□□□ 1.41
CPNE5-208ENST00000634222 PABPN1Q86U42 306 aaKnown RBP eCLIP23.86■■□□□ 1.41
CPNE5-208ENST00000634222 BAZ1AQ9NRL2 1556 aaPredicted RBP23.82■■□□□ 1.4
CPNE5-208ENST00000634222 WIZO95785 1651 aa23.82■■□□□ 1.4
CPNE5-208ENST00000634222 SMARCA4P51532 1647 aa23.71■■□□□ 1.39
CPNE5-208ENST00000634222 TOP2AP11388 1531 aaKnown RBP23.49■■□□□ 1.35
CPNE5-208ENST00000634222 PEG3Q9GZU2 1588 aa23.34■■□□□ 1.33
CPNE5-208ENST00000634222 SMARCA2P51531 1590 aa23.31■■□□□ 1.32
CPNE5-208ENST00000634222 CCDC88BA6NC98 1476 aa23.31■■□□□ 1.32
CPNE5-208ENST00000634222 EIF4G1Q04637 1599 aaKnown RBP23.26■■□□□ 1.31
CPNE5-208ENST00000634222 ATAD2BQ9ULI0 1458 aa23.25■■□□□ 1.31
CPNE5-208ENST00000634222 TRIM41Q8WV44 630 aa23.21■■□□□ 1.31
CPNE5-208ENST00000634222 BAZ1BQ9UIG0 1483 aaKnown RBP23.13■■□□□ 1.29
CPNE5-208ENST00000634222 LOC105371045A0A1W2PR82 267 aa23.06■■□□□ 1.28
CPNE5-208ENST00000634222 ABCC8Q09428 1581 aa22.99■■□□□ 1.27
CPNE5-208ENST00000634222 NCAPD3P42695 1498 aa22.94■■□□□ 1.26
CPNE5-208ENST00000634222 FAM9AQ8IZU1 332 aaPredicted RBP22.93■■□□□ 1.26
CPNE5-208ENST00000634222 HMGXB3Q12766 1538 aa22.92■■□□□ 1.26
CPNE5-208ENST00000634222 CC2D2AQ9P2K1 1620 aa22.74■■□□□ 1.23
CPNE5-208ENST00000634222 WRNQ14191 1432 aaPredicted RBP eCLIP22.71■■□□□ 1.23
CPNE5-208ENST00000634222 EHMT2Q96KQ7 1210 aa22.7■■□□□ 1.22
CPNE5-208ENST00000634222 SYNJ1O43426 1573 aa22.65■■□□□ 1.22
CPNE5-208ENST00000634222 SOGA1O94964 1423 aa22.61■■□□□ 1.21
CPNE5-208ENST00000634222 CFTRP13569 1480 aa22.55■■□□□ 1.2
CPNE5-208ENST00000634222 RUSC2Q8N2Y8 1516 aa22.54■■□□□ 1.2
CPNE5-208ENST00000634222 HRCP23327 699 aa22.5■■□□□ 1.19
CPNE5-208ENST00000634222 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
CPNE5-208ENST00000634222 EEA1Q15075 1411 aa22.46■■□□□ 1.19
CPNE5-208ENST00000634222 BIVM-ERCC5R4GMW8 1640 aa22.43■■□□□ 1.18
CPNE5-208ENST00000634222 PRDM2Q13029 1718 aa22.42■■□□□ 1.18
CPNE5-208ENST00000634222 CADPSQ9ULU8 1353 aa22.41■■□□□ 1.18
CPNE5-208ENST00000634222 CSRNP3Q8WYN3 585 aa22.4■■□□□ 1.18
CPNE5-208ENST00000634222 CUX1P39880 1505 aa22.38■■□□□ 1.17
CPNE5-208ENST00000634222 PCGF6Q9BYE7 350 aa22.31■■□□□ 1.16
CPNE5-208ENST00000634222 GOLGA3Q08378 1498 aa22.24■■□□□ 1.15
CPNE5-208ENST00000634222 NESP48681 1621 aa22.23■■□□□ 1.15
CPNE5-208ENST00000634222 TNIKQ9UKE5 1360 aa22.23■■□□□ 1.15
CPNE5-208ENST00000634222 DNAJC5BQ9UF47 199 aa22.22■■□□□ 1.15
CPNE5-208ENST00000634222 KIF21BO75037 1637 aa22.21■■□□□ 1.15
CPNE5-208ENST00000634222 UBTFP17480 764 aaKnown RBP22.2■■□□□ 1.14
CPNE5-208ENST00000634222 FANCD2Q9BXW9 1451 aa22.19■■□□□ 1.14
CPNE5-208ENST00000634222 CEP164Q9UPV0 1460 aa22.19■■□□□ 1.14
CPNE5-208ENST00000634222 CEP162Q5TB80 1403 aa22.19■■□□□ 1.14
CPNE5-208ENST00000634222 TRIM26Q12899 539 aaPredicted RBP22.12■■□□□ 1.13
CPNE5-208ENST00000634222 RAPGEF2Q9Y4G8 1499 aa22.12■■□□□ 1.13
CPNE5-208ENST00000634222 LAMC3Q9Y6N6 1575 aa22.1■■□□□ 1.13
CPNE5-208ENST00000634222 FGD5Q6ZNL6 1462 aa22.08■■□□□ 1.13
CPNE5-208ENST00000634222 KIF27Q86VH2 1401 aa22.07■■□□□ 1.12
CPNE5-208ENST00000634222 PRXQ9BXM0 1461 aa22.03■■□□□ 1.12
CPNE5-208ENST00000634222 PPARGC1BQ86YN6 1023 aaKnown RBP22.02■■□□□ 1.12
CPNE5-208ENST00000634222 DNMBPQ6XZF7 1577 aa22.01■■□□□ 1.11
CPNE5-208ENST00000634222 CUX2O14529 1486 aa22■■□□□ 1.11
CPNE5-208ENST00000634222 TOPBP1Q92547 1522 aa21.99■■□□□ 1.11
CPNE5-208ENST00000634222 ERICH3Q5RHP9 1530 aa21.98■■□□□ 1.11
CPNE5-208ENST00000634222 CLIP1P30622 1438 aa21.93■■□□□ 1.1
CPNE5-208ENST00000634222 URB2Q14146 1524 aaKnown RBP21.93■■□□□ 1.1
CPNE5-208ENST00000634222 PDS5BQ9NTI5 1447 aa21.92■■□□□ 1.1
CPNE5-208ENST00000634222 POLA1P09884 1462 aaPredicted RBP21.92■■□□□ 1.1
CPNE5-208ENST00000634222 RAD54L2Q9Y4B4 1467 aa21.91■■□□□ 1.1
CPNE5-208ENST00000634222 KIF21AQ7Z4S6 1674 aa21.9■■□□□ 1.1
CPNE5-208ENST00000634222 IGF1RP08069 1367 aa21.88■■□□□ 1.09
CPNE5-208ENST00000634222 RANGAP1P46060 587 aaPredicted RBP21.88■■□□□ 1.09
CPNE5-208ENST00000634222 ABCA10Q8WWZ4 1543 aa21.84■■□□□ 1.09
CPNE5-208ENST00000634222 TTBK1Q5TCY1 1321 aaPredicted RBP21.79■■□□□ 1.08
CPNE5-208ENST00000634222 CARMIL1Q5VZK9 1371 aa21.78■■□□□ 1.08
CPNE5-208ENST00000634222 VPS8Q8N3P4 1428 aa21.76■■□□□ 1.07
CPNE5-208ENST00000634222 WDR97A6NE52 1622 aa21.76■■□□□ 1.07
CPNE5-208ENST00000634222 ARAP1Q96P48 1450 aa21.7■■□□□ 1.06
CPNE5-208ENST00000634222 TDRD9Q8NDG6 1382 aaKnown RBP21.66■■□□□ 1.06
CPNE5-208ENST00000634222 PELP1Q8IZL8 1130 aaKnown RBP21.66■■□□□ 1.06
CPNE5-208ENST00000634222 MRC2Q9UBG0 1479 aa21.66■■□□□ 1.06
CPNE5-208ENST00000634222 ABCA5Q8WWZ7 1642 aa21.65■■□□□ 1.06
CPNE5-208ENST00000634222 ARHGAP35Q9NRY4 1499 aa21.63■■□□□ 1.05
CPNE5-208ENST00000634222 TARBP1Q13395 1621 aaKnown RBP21.63■■□□□ 1.05
CPNE5-208ENST00000634222 CUL7Q14999 1698 aa21.62■■□□□ 1.05
CPNE5-208ENST00000634222 GAPVD1Q14C86 1478 aa21.6■■□□□ 1.05
CPNE5-208ENST00000634222 APLP2Q06481 763 aa21.54■■□□□ 1.04
CPNE5-208ENST00000634222 WDR62O43379 1518 aa21.53■■□□□ 1.04
CPNE5-208ENST00000634222 ERCC6Q03468 1493 aa21.49■■□□□ 1.03
CPNE5-208ENST00000634222 CTTNBP2Q8WZ74 1663 aa21.47■■□□□ 1.03
CPNE5-208ENST00000634222 AQRO60306 1485 aaKnown RBP eCLIP21.47■■□□□ 1.03
CPNE5-208ENST00000634222 PBRM1Q86U86 1689 aa21.46■■□□□ 1.03
CPNE5-208ENST00000634222 THOC2Q8NI27 1593 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms