RNA–Protein interactions for RNA: ENST00000631025.2

SOX2-OT-259, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 954 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-259ENST00000631025 NISCHQ9Y2I1 1504 aa34.06■■■■□ 3.04
SOX2-OT-259ENST00000631025 AEBP2Q6ZN18 517 aaPredicted RBP33.33■■■□□ 2.93
SOX2-OT-259ENST00000631025 CHIC1Q5VXU3 224 aa32.56■■■□□ 2.8
SOX2-OT-259ENST00000631025 CCDC180Q9P1Z9 1646 aa30.27■■■□□ 2.44
SOX2-OT-259ENST00000631025 ABCC9O60706 1549 aa30.16■■■□□ 2.42
SOX2-OT-259ENST00000631025 RB1CC1Q8TDY2 1594 aa28.68■■■□□ 2.18
SOX2-OT-259ENST00000631025 DCAF8L2P0C7V8 631 aa28.67■■■□□ 2.18
SOX2-OT-259ENST00000631025 PHF23Q9BUL5 403 aaPredicted RBP28.63■■■□□ 2.17
SOX2-OT-259ENST00000631025 NACADO15069 1562 aa28.57■■■□□ 2.16
SOX2-OT-259ENST00000631025 ZCCHC6Q5VYS8 1495 aaKnown RBP28.33■■■□□ 2.13
SOX2-OT-259ENST00000631025 SENP3Q9H4L4 574 aaPredicted RBP28.28■■■□□ 2.12
SOX2-OT-259ENST00000631025 MYO15BQ96JP2 1530 aa28.26■■■□□ 2.11
SOX2-OT-259ENST00000631025 PABPN1Q86U42 306 aaKnown RBP eCLIP28.18■■■□□ 2.1
SOX2-OT-259ENST00000631025 DNAJC5BQ9UF47 199 aa28.06■■■□□ 2.08
SOX2-OT-259ENST00000631025 DCAF1Q9Y4B6 1507 aa28.06■■■□□ 2.08
SOX2-OT-259ENST00000631025 UNC13AQ9UPW8 1703 aa28.04■■■□□ 2.08
SOX2-OT-259ENST00000631025 BICRAQ9NZM4 1560 aa27.97■■■□□ 2.07
SOX2-OT-259ENST00000631025 SCRIBQ14160 1630 aa27.79■■■□□ 2.04
SOX2-OT-259ENST00000631025 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
SOX2-OT-259ENST00000631025 EIF4G1Q04637 1599 aaKnown RBP27.21■■□□□ 1.95
SOX2-OT-259ENST00000631025 CC2D2AQ9P2K1 1620 aa27.17■■□□□ 1.94
SOX2-OT-259ENST00000631025 CECR2Q9BXF3 1484 aa27.06■■□□□ 1.92
SOX2-OT-259ENST00000631025 SMARCA4P51532 1647 aa26.48■■□□□ 1.83
SOX2-OT-259ENST00000631025 ATAD2BQ9ULI0 1458 aa26.45■■□□□ 1.82
SOX2-OT-259ENST00000631025 PLPPR3Q6T4P5 718 aa26.44■■□□□ 1.82
SOX2-OT-259ENST00000631025 NCAPD3P42695 1498 aa26.43■■□□□ 1.82
SOX2-OT-259ENST00000631025 BAZ1AQ9NRL2 1556 aaPredicted RBP26.36■■□□□ 1.81
SOX2-OT-259ENST00000631025 MROH2BQ7Z745 1585 aa26.33■■□□□ 1.8
SOX2-OT-259ENST00000631025 SMARCA2P51531 1590 aa26.3■■□□□ 1.8
SOX2-OT-259ENST00000631025 FOXD1Q16676 465 aa26.25■■□□□ 1.79
SOX2-OT-259ENST00000631025 HMGXB3Q12766 1538 aa26.24■■□□□ 1.79
SOX2-OT-259ENST00000631025 BAZ1BQ9UIG0 1483 aaKnown RBP26.19■■□□□ 1.78
SOX2-OT-259ENST00000631025 PEG3Q9GZU2 1588 aa26.17■■□□□ 1.78
SOX2-OT-259ENST00000631025 NESP48681 1621 aa26.04■■□□□ 1.76
SOX2-OT-259ENST00000631025 WIZO95785 1651 aa25.99■■□□□ 1.75
SOX2-OT-259ENST00000631025 ERCC6Q03468 1493 aa25.92■■□□□ 1.74
SOX2-OT-259ENST00000631025 RSF1Q96T23 1441 aaPredicted RBP25.9■■□□□ 1.74
SOX2-OT-259ENST00000631025 LAMC3Q9Y6N6 1575 aa25.72■■□□□ 1.71
SOX2-OT-259ENST00000631025 CUX2O14529 1486 aa25.69■■□□□ 1.7
SOX2-OT-259ENST00000631025 CADPSQ9ULU8 1353 aa25.67■■□□□ 1.7
SOX2-OT-259ENST00000631025 TOP2AP11388 1531 aaKnown RBP25.64■■□□□ 1.7
SOX2-OT-259ENST00000631025 THOC2Q8NI27 1593 aaKnown RBP25.61■■□□□ 1.69
SOX2-OT-259ENST00000631025 KIF21AQ7Z4S6 1674 aa25.58■■□□□ 1.69
SOX2-OT-259ENST00000631025 PDS5BQ9NTI5 1447 aa25.58■■□□□ 1.69
SOX2-OT-259ENST00000631025 CFTRP13569 1480 aa25.45■■□□□ 1.66
SOX2-OT-259ENST00000631025 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
SOX2-OT-259ENST00000631025 FANCD2Q9BXW9 1451 aa25.4■■□□□ 1.66
SOX2-OT-259ENST00000631025 MRC2Q9UBG0 1479 aa25.4■■□□□ 1.66
SOX2-OT-259ENST00000631025 CEP164Q9UPV0 1460 aa25.35■■□□□ 1.65
SOX2-OT-259ENST00000631025 DNAJC5Q9H3Z4 198 aa25.35■■□□□ 1.65
SOX2-OT-259ENST00000631025 WDR62O43379 1518 aa25.32■■□□□ 1.64
SOX2-OT-259ENST00000631025 PPP6R1Q9UPN7 881 aa25.26■■□□□ 1.63
SOX2-OT-259ENST00000631025 ADRA2BP18089 450 aa25.23■■□□□ 1.63
SOX2-OT-259ENST00000631025 URB2Q14146 1524 aaKnown RBP25.22■■□□□ 1.63
SOX2-OT-259ENST00000631025 SUPT5HO00267 1087 aaKnown RBP25.08■■□□□ 1.61
SOX2-OT-259ENST00000631025 PRDM2Q13029 1718 aa25.04■■□□□ 1.6
SOX2-OT-259ENST00000631025 TOPBP1Q92547 1522 aa24.96■■□□□ 1.59
SOX2-OT-259ENST00000631025 ZNF608Q9ULD9 1512 aaPredicted RBP24.88■■□□□ 1.57
SOX2-OT-259ENST00000631025 DNMBPQ6XZF7 1577 aa24.85■■□□□ 1.57
SOX2-OT-259ENST00000631025 IFT140Q96RY7 1462 aa24.83■■□□□ 1.56
SOX2-OT-259ENST00000631025 ABCC8Q09428 1581 aa24.77■■□□□ 1.56
SOX2-OT-259ENST00000631025 PIAS4Q8N2W9 510 aaPredicted RBP24.74■■□□□ 1.55
SOX2-OT-259ENST00000631025 POLA1P09884 1462 aaPredicted RBP24.74■■□□□ 1.55
SOX2-OT-259ENST00000631025 RAD54L2Q9Y4B4 1467 aa24.71■■□□□ 1.55
SOX2-OT-259ENST00000631025 CUX1P39880 1505 aa24.71■■□□□ 1.55
SOX2-OT-259ENST00000631025 TARBP1Q13395 1621 aaKnown RBP24.69■■□□□ 1.54
SOX2-OT-259ENST00000631025 EIF4G3O43432 1585 aaKnown RBP24.67■■□□□ 1.54
SOX2-OT-259ENST00000631025 AQRO60306 1485 aaKnown RBP eCLIP24.67■■□□□ 1.54
SOX2-OT-259ENST00000631025 FGD5Q6ZNL6 1462 aa24.64■■□□□ 1.54
SOX2-OT-259ENST00000631025 SOGA1O94964 1423 aa24.61■■□□□ 1.53
SOX2-OT-259ENST00000631025 OSCARQ8IYS5 282 aa24.61■■□□□ 1.53
SOX2-OT-259ENST00000631025 TDRD9Q8NDG6 1382 aaKnown RBP24.6■■□□□ 1.53
SOX2-OT-259ENST00000631025 TRIM41Q8WV44 630 aa24.47■■□□□ 1.51
SOX2-OT-259ENST00000631025 FBLN2P98095 1184 aa24.42■■□□□ 1.5
SOX2-OT-259ENST00000631025 SNAPC4Q5SXM2 1469 aa24.41■■□□□ 1.5
SOX2-OT-259ENST00000631025 SYNJ1O43426 1573 aa24.39■■□□□ 1.5
SOX2-OT-259ENST00000631025 WRNQ14191 1432 aaPredicted RBP eCLIP24.38■■□□□ 1.49
SOX2-OT-259ENST00000631025 WDR97A6NE52 1622 aa24.38■■□□□ 1.49
SOX2-OT-259ENST00000631025 CHD1O14646 1710 aa24.37■■□□□ 1.49
SOX2-OT-259ENST00000631025 ABCA10Q8WWZ4 1543 aa24.34■■□□□ 1.49
SOX2-OT-259ENST00000631025 GRIN2BQ13224 1484 aa24.32■■□□□ 1.48
SOX2-OT-259ENST00000631025 TOP2BQ02880 1626 aa24.32■■□□□ 1.48
SOX2-OT-259ENST00000631025 GAPVD1Q14C86 1478 aa24.31■■□□□ 1.48
SOX2-OT-259ENST00000631025 BIVM-ERCC5R4GMW8 1640 aa24.29■■□□□ 1.48
SOX2-OT-259ENST00000631025 RIMBP3CA6NJZ7 1639 aa24.28■■□□□ 1.48
SOX2-OT-259ENST00000631025 RIMBP3BA6NNM3 1639 aa24.28■■□□□ 1.48
SOX2-OT-259ENST00000631025 RIMBP3Q9UFD9 1639 aa24.28■■□□□ 1.48
SOX2-OT-259ENST00000631025 ARHGEF11O15085 1522 aa24.27■■□□□ 1.48
SOX2-OT-259ENST00000631025 ABCA5Q8WWZ7 1642 aa24.27■■□□□ 1.48
SOX2-OT-259ENST00000631025 MAGI1Q96QZ7 1491 aaPredicted RBP24.26■■□□□ 1.47
SOX2-OT-259ENST00000631025 CHMP7Q8WUX9 453 aaPredicted RBP24.23■■□□□ 1.47
SOX2-OT-259ENST00000631025 SYNJ2O15056 1496 aa24.21■■□□□ 1.47
SOX2-OT-259ENST00000631025 PBRM1Q86U86 1689 aa24.21■■□□□ 1.47
SOX2-OT-259ENST00000631025 MSH5O43196 834 aa24.2■■□□□ 1.46
SOX2-OT-259ENST00000631025 CLASP1Q7Z460 1538 aa24.15■■□□□ 1.46
SOX2-OT-259ENST00000631025 ARAP1Q96P48 1450 aa24.1■■□□□ 1.45
SOX2-OT-259ENST00000631025 CYB5RLQ6IPT4 315 aa24.09■■□□□ 1.45
SOX2-OT-259ENST00000631025 ADAMTS12P58397 1594 aa24.08■■□□□ 1.45
SOX2-OT-259ENST00000631025 GRIN2AQ12879 1464 aa24.04■■□□□ 1.44
SOX2-OT-259ENST00000631025 FHAD1B1AJZ9 1412 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms