RNA–Protein interactions for RNA: ENST00000630268.2

TCF4-270, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-270ENST00000630268 AEBP2Q6ZN18 517 aaPredicted RBP16.57■□□□□ 0.24
TCF4-270ENST00000630268 CHIC1Q5VXU3 224 aa15.6■□□□□ 0.09
TCF4-270ENST00000630268 NISCHQ9Y2I1 1504 aa15.54■□□□□ 0.08
TCF4-270ENST00000630268 SENP3Q9H4L4 574 aaPredicted RBP14.13□□□□□ -0.15
TCF4-270ENST00000630268 PHF23Q9BUL5 403 aaPredicted RBP13.97□□□□□ -0.17
TCF4-270ENST00000630268 CCDC180Q9P1Z9 1646 aa13.82□□□□□ -0.2
TCF4-270ENST00000630268 ABCC9O60706 1549 aa13.79□□□□□ -0.2
TCF4-270ENST00000630268 DCAF8L2P0C7V8 631 aa13.22□□□□□ -0.29
TCF4-270ENST00000630268 FOXD1Q16676 465 aa13.21□□□□□ -0.29
TCF4-270ENST00000630268 RB1CC1Q8TDY2 1594 aa13.15□□□□□ -0.3
TCF4-270ENST00000630268 NACADO15069 1562 aa13.08□□□□□ -0.32
TCF4-270ENST00000630268 MYO15BQ96JP2 1530 aa12.93□□□□□ -0.34
TCF4-270ENST00000630268 PABPN1Q86U42 306 aaKnown RBP eCLIP12.91□□□□□ -0.34
TCF4-270ENST00000630268 ZCCHC6Q5VYS8 1495 aaKnown RBP12.9□□□□□ -0.34
TCF4-270ENST00000630268 DCAF1Q9Y4B6 1507 aa12.82□□□□□ -0.36
TCF4-270ENST00000630268 DNAJC5BQ9UF47 199 aa12.8□□□□□ -0.36
TCF4-270ENST00000630268 UNC13AQ9UPW8 1703 aa12.76□□□□□ -0.37
TCF4-270ENST00000630268 BICRAQ9NZM4 1560 aa12.72□□□□□ -0.37
TCF4-270ENST00000630268 SCRIBQ14160 1630 aa12.67□□□□□ -0.38
TCF4-270ENST00000630268 SHROOM4Q9ULL8 1493 aa12.58□□□□□ -0.4
TCF4-270ENST00000630268 PLPPR3Q6T4P5 718 aa12.42□□□□□ -0.42
TCF4-270ENST00000630268 EIF4G1Q04637 1599 aaKnown RBP12.42□□□□□ -0.42
TCF4-270ENST00000630268 CC2D2AQ9P2K1 1620 aa12.41□□□□□ -0.42
TCF4-270ENST00000630268 CECR2Q9BXF3 1484 aa12.4□□□□□ -0.42
TCF4-270ENST00000630268 MSH5O43196 834 aa12.38□□□□□ -0.43
TCF4-270ENST00000630268 PIAS4Q8N2W9 510 aaPredicted RBP12.35□□□□□ -0.43
TCF4-270ENST00000630268 POTEDQ86YR6 584 aa12.32□□□□□ -0.44
TCF4-270ENST00000630268 PPP6R1Q9UPN7 881 aa12.28□□□□□ -0.44
TCF4-270ENST00000630268 ADRA2BP18089 450 aa12.26□□□□□ -0.45
TCF4-270ENST00000630268 NCAPD3P42695 1498 aa12.09□□□□□ -0.47
TCF4-270ENST00000630268 ATAD2BQ9ULI0 1458 aa12.08□□□□□ -0.47
TCF4-270ENST00000630268 SMARCA4P51532 1647 aa12.08□□□□□ -0.48
TCF4-270ENST00000630268 BAZ1AQ9NRL2 1556 aaPredicted RBP12.06□□□□□ -0.48
TCF4-270ENST00000630268 SMARCA2P51531 1590 aa12.05□□□□□ -0.48
TCF4-270ENST00000630268 BAZ1BQ9UIG0 1483 aaKnown RBP11.99□□□□□ -0.49
TCF4-270ENST00000630268 HMGXB3Q12766 1538 aa11.99□□□□□ -0.49
TCF4-270ENST00000630268 MROH2BQ7Z745 1585 aa11.98□□□□□ -0.49
TCF4-270ENST00000630268 PEG3Q9GZU2 1588 aa11.93□□□□□ -0.5
TCF4-270ENST00000630268 ERCC6Q03468 1493 aa11.92□□□□□ -0.5
TCF4-270ENST00000630268 NESP48681 1621 aa11.86□□□□□ -0.51
TCF4-270ENST00000630268 WIZO95785 1651 aa11.83□□□□□ -0.52
TCF4-270ENST00000630268 RSF1Q96T23 1441 aaPredicted RBP11.8□□□□□ -0.52
TCF4-270ENST00000630268 CUX2O14529 1486 aa11.8□□□□□ -0.52
TCF4-270ENST00000630268 LAMC3Q9Y6N6 1575 aa11.78□□□□□ -0.52
TCF4-270ENST00000630268 PDS5BQ9NTI5 1447 aa11.77□□□□□ -0.52
TCF4-270ENST00000630268 CADPSQ9ULU8 1353 aa11.77□□□□□ -0.53
TCF4-270ENST00000630268 TOP2AP11388 1531 aaKnown RBP11.7□□□□□ -0.54
TCF4-270ENST00000630268 DNAJC5Q9H3Z4 198 aa11.67□□□□□ -0.54
TCF4-270ENST00000630268 KIF21AQ7Z4S6 1674 aa11.66□□□□□ -0.54
TCF4-270ENST00000630268 THOC2Q8NI27 1593 aaKnown RBP11.66□□□□□ -0.54
TCF4-270ENST00000630268 CFTRP13569 1480 aa11.63□□□□□ -0.55
TCF4-270ENST00000630268 MRC2Q9UBG0 1479 aa11.63□□□□□ -0.55
TCF4-270ENST00000630268 FANCD2Q9BXW9 1451 aa11.62□□□□□ -0.55
TCF4-270ENST00000630268 CEP164Q9UPV0 1460 aa11.62□□□□□ -0.55
TCF4-270ENST00000630268 CCDC88BA6NC98 1476 aa11.59□□□□□ -0.55
TCF4-270ENST00000630268 WDR62O43379 1518 aa11.55□□□□□ -0.56
TCF4-270ENST00000630268 SUPT5HO00267 1087 aaKnown RBP11.5□□□□□ -0.57
TCF4-270ENST00000630268 URB2Q14146 1524 aaKnown RBP11.49□□□□□ -0.57
TCF4-270ENST00000630268 PRDM2Q13029 1718 aa11.43□□□□□ -0.58
TCF4-270ENST00000630268 ABCC8Q09428 1581 aa11.4□□□□□ -0.58
TCF4-270ENST00000630268 TOPBP1Q92547 1522 aa11.4□□□□□ -0.59
TCF4-270ENST00000630268 IFT140Q96RY7 1462 aa11.38□□□□□ -0.59
TCF4-270ENST00000630268 OSCARQ8IYS5 282 aa11.36□□□□□ -0.59
TCF4-270ENST00000630268 DNMBPQ6XZF7 1577 aa11.36□□□□□ -0.59
TCF4-270ENST00000630268 ZNF608Q9ULD9 1512 aaPredicted RBP11.34□□□□□ -0.59
TCF4-270ENST00000630268 MAPK8IP2Q13387 824 aaPredicted RBP11.31□□□□□ -0.6
TCF4-270ENST00000630268 SOGA1O94964 1423 aa11.29□□□□□ -0.6
TCF4-270ENST00000630268 AQRO60306 1485 aaKnown RBP eCLIP11.29□□□□□ -0.6
TCF4-270ENST00000630268 POLA1P09884 1462 aaPredicted RBP11.29□□□□□ -0.6
TCF4-270ENST00000630268 TRIM41Q8WV44 630 aa11.28□□□□□ -0.6
TCF4-270ENST00000630268 RAD54L2Q9Y4B4 1467 aa11.27□□□□□ -0.6
TCF4-270ENST00000630268 FBLN2P98095 1184 aa11.26□□□□□ -0.61
TCF4-270ENST00000630268 TDRD9Q8NDG6 1382 aaKnown RBP11.25□□□□□ -0.61
TCF4-270ENST00000630268 FGD5Q6ZNL6 1462 aa11.25□□□□□ -0.61
TCF4-270ENST00000630268 CUX1P39880 1505 aa11.25□□□□□ -0.61
TCF4-270ENST00000630268 EIF4G3O43432 1585 aaKnown RBP11.24□□□□□ -0.61
TCF4-270ENST00000630268 TARBP1Q13395 1621 aaKnown RBP11.24□□□□□ -0.61
TCF4-270ENST00000630268 SCAF1Q9H7N4 1312 aaKnown RBP11.18□□□□□ -0.62
TCF4-270ENST00000630268 CHMP7Q8WUX9 453 aaPredicted RBP11.18□□□□□ -0.62
TCF4-270ENST00000630268 DMRT2Q9Y5R5 561 aa11.18□□□□□ -0.62
TCF4-270ENST00000630268 WRNQ14191 1432 aaPredicted RBP eCLIP11.16□□□□□ -0.62
TCF4-270ENST00000630268 GRIN2BQ13224 1484 aa11.15□□□□□ -0.62
TCF4-270ENST00000630268 SNAPC4Q5SXM2 1469 aa11.15□□□□□ -0.62
TCF4-270ENST00000630268 WDR97A6NE52 1622 aa11.14□□□□□ -0.63
TCF4-270ENST00000630268 GAPVD1Q14C86 1478 aa11.13□□□□□ -0.63
TCF4-270ENST00000630268 ABCA10Q8WWZ4 1543 aa11.12□□□□□ -0.63
TCF4-270ENST00000630268 CHD1O14646 1710 aa11.12□□□□□ -0.63
TCF4-270ENST00000630268 MAGI1Q96QZ7 1491 aaPredicted RBP11.12□□□□□ -0.63
TCF4-270ENST00000630268 CYB5RLQ6IPT4 315 aa11.1□□□□□ -0.63
TCF4-270ENST00000630268 ARHGEF11O15085 1522 aa11.09□□□□□ -0.63
TCF4-270ENST00000630268 RIMBP3CA6NJZ7 1639 aa11.09□□□□□ -0.63
TCF4-270ENST00000630268 RIMBP3BA6NNM3 1639 aa11.09□□□□□ -0.63
TCF4-270ENST00000630268 TOP2BQ02880 1626 aa11.09□□□□□ -0.63
TCF4-270ENST00000630268 RIMBP3Q9UFD9 1639 aa11.09□□□□□ -0.63
TCF4-270ENST00000630268 SYNJ2O15056 1496 aa11.09□□□□□ -0.63
TCF4-270ENST00000630268 SYNJ1O43426 1573 aa11.08□□□□□ -0.64
TCF4-270ENST00000630268 BIVM-ERCC5R4GMW8 1640 aa11.06□□□□□ -0.64
TCF4-270ENST00000630268 ABCA5Q8WWZ7 1642 aa11.05□□□□□ -0.64
TCF4-270ENST00000630268 PBRM1Q86U86 1689 aa11.04□□□□□ -0.64
TCF4-270ENST00000630268 CLASP1Q7Z460 1538 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms