RNA–Protein interactions for RNA: ENST00000629670.1

CCDC163-208, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-208ENST00000629670 NISCHQ9Y2I1 1504 aa27.72■■■□□ 2.03
CCDC163-208ENST00000629670 ABCC9O60706 1549 aa24.88■■□□□ 1.57
CCDC163-208ENST00000629670 CCDC180Q9P1Z9 1646 aa24.84■■□□□ 1.57
CCDC163-208ENST00000629670 RB1CC1Q8TDY2 1594 aa23.71■■□□□ 1.39
CCDC163-208ENST00000629670 DCAF8L2P0C7V8 631 aa23.55■■□□□ 1.36
CCDC163-208ENST00000629670 NACADO15069 1562 aa23.54■■□□□ 1.36
CCDC163-208ENST00000629670 DNAJC5BQ9UF47 199 aa23.3■■□□□ 1.32
CCDC163-208ENST00000629670 PABPN1Q86U42 306 aaKnown RBP eCLIP23.21■■□□□ 1.31
CCDC163-208ENST00000629670 MYO15BQ96JP2 1530 aa23.21■■□□□ 1.31
CCDC163-208ENST00000629670 UNC13AQ9UPW8 1703 aa23.01■■□□□ 1.27
CCDC163-208ENST00000629670 ZCCHC6Q5VYS8 1495 aaKnown RBP22.96■■□□□ 1.27
CCDC163-208ENST00000629670 BICRAQ9NZM4 1560 aa22.91■■□□□ 1.26
CCDC163-208ENST00000629670 DCAF1Q9Y4B6 1507 aa22.91■■□□□ 1.26
CCDC163-208ENST00000629670 SHROOM4Q9ULL8 1493 aa22.72■■□□□ 1.23
CCDC163-208ENST00000629670 SCRIBQ14160 1630 aa22.64■■□□□ 1.22
CCDC163-208ENST00000629670 CECR2Q9BXF3 1484 aa22.44■■□□□ 1.18
CCDC163-208ENST00000629670 CC2D2AQ9P2K1 1620 aa22.44■■□□□ 1.18
CCDC163-208ENST00000629670 EIF4G1Q04637 1599 aaKnown RBP22.41■■□□□ 1.18
CCDC163-208ENST00000629670 NCAPD3P42695 1498 aa21.74■■□□□ 1.07
CCDC163-208ENST00000629670 ATAD2BQ9ULI0 1458 aa21.65■■□□□ 1.06
CCDC163-208ENST00000629670 SMARCA2P51531 1590 aa21.62■■□□□ 1.05
CCDC163-208ENST00000629670 SMARCA4P51532 1647 aa21.6■■□□□ 1.05
CCDC163-208ENST00000629670 ERCC6Q03468 1493 aa21.55■■□□□ 1.04
CCDC163-208ENST00000629670 HMGXB3Q12766 1538 aa21.55■■□□□ 1.04
CCDC163-208ENST00000629670 BAZ1AQ9NRL2 1556 aaPredicted RBP21.54■■□□□ 1.04
CCDC163-208ENST00000629670 DNAJC5Q9H3Z4 198 aa21.48■■□□□ 1.03
CCDC163-208ENST00000629670 CUX2O14529 1486 aa21.47■■□□□ 1.03
CCDC163-208ENST00000629670 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
CCDC163-208ENST00000629670 PEG3Q9GZU2 1588 aa21.39■■□□□ 1.01
CCDC163-208ENST00000629670 NESP48681 1621 aa21.33■■□□□ 1.01
CCDC163-208ENST00000629670 MROH2BQ7Z745 1585 aa21.33■■□□□ 1.01
CCDC163-208ENST00000629670 LAMC3Q9Y6N6 1575 aa21.23■□□□□ 0.99
CCDC163-208ENST00000629670 PDS5BQ9NTI5 1447 aa21.19■□□□□ 0.98
CCDC163-208ENST00000629670 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
CCDC163-208ENST00000629670 THOC2Q8NI27 1593 aaKnown RBP21.09■□□□□ 0.97
CCDC163-208ENST00000629670 WIZO95785 1651 aa21.05■□□□□ 0.96
CCDC163-208ENST00000629670 KIF21AQ7Z4S6 1674 aa21.02■□□□□ 0.96
CCDC163-208ENST00000629670 MRC2Q9UBG0 1479 aa20.94■□□□□ 0.94
CCDC163-208ENST00000629670 RSF1Q96T23 1441 aaPredicted RBP20.93■□□□□ 0.94
CCDC163-208ENST00000629670 CEP164Q9UPV0 1460 aa20.88■□□□□ 0.93
CCDC163-208ENST00000629670 WDR62O43379 1518 aa20.85■□□□□ 0.93
CCDC163-208ENST00000629670 FANCD2Q9BXW9 1451 aa20.84■□□□□ 0.93
CCDC163-208ENST00000629670 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.93
CCDC163-208ENST00000629670 CFTRP13569 1480 aa20.82■□□□□ 0.92
CCDC163-208ENST00000629670 URB2Q14146 1524 aaKnown RBP20.62■□□□□ 0.89
CCDC163-208ENST00000629670 CCDC88BA6NC98 1476 aa20.62■□□□□ 0.89
CCDC163-208ENST00000629670 TRIM41Q8WV44 630 aa20.58■□□□□ 0.89
CCDC163-208ENST00000629670 OSCARQ8IYS5 282 aa20.57■□□□□ 0.88
CCDC163-208ENST00000629670 PRDM2Q13029 1718 aa20.53■□□□□ 0.88
CCDC163-208ENST00000629670 IFT140Q96RY7 1462 aa20.47■□□□□ 0.87
CCDC163-208ENST00000629670 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
CCDC163-208ENST00000629670 TOPBP1Q92547 1522 aa20.43■□□□□ 0.86
CCDC163-208ENST00000629670 ZNF608Q9ULD9 1512 aaPredicted RBP20.37■□□□□ 0.85
CCDC163-208ENST00000629670 DNMBPQ6XZF7 1577 aa20.35■□□□□ 0.85
CCDC163-208ENST00000629670 EIF4G3O43432 1585 aaKnown RBP20.24■□□□□ 0.83
CCDC163-208ENST00000629670 AQRO60306 1485 aaKnown RBP eCLIP20.23■□□□□ 0.832e-10■■■■□ 24.2
CCDC163-208ENST00000629670 POLA1P09884 1462 aaPredicted RBP20.21■□□□□ 0.83
CCDC163-208ENST00000629670 TARBP1Q13395 1621 aaKnown RBP20.2■□□□□ 0.82
CCDC163-208ENST00000629670 FBLN2P98095 1184 aa20.19■□□□□ 0.82
CCDC163-208ENST00000629670 SOGA1O94964 1423 aa20.19■□□□□ 0.82
CCDC163-208ENST00000629670 RIMBP3CA6NJZ7 1639 aa20.16■□□□□ 0.82
CCDC163-208ENST00000629670 RIMBP3BA6NNM3 1639 aa20.16■□□□□ 0.82
CCDC163-208ENST00000629670 RIMBP3Q9UFD9 1639 aa20.16■□□□□ 0.82
CCDC163-208ENST00000629670 RAD54L2Q9Y4B4 1467 aa20.14■□□□□ 0.81
CCDC163-208ENST00000629670 ARHGEF11O15085 1522 aa20.12■□□□□ 0.81
CCDC163-208ENST00000629670 TDRD9Q8NDG6 1382 aaKnown RBP20.12■□□□□ 0.81
CCDC163-208ENST00000629670 SUPT5HO00267 1087 aaKnown RBP20.11■□□□□ 0.81
CCDC163-208ENST00000629670 FGD5Q6ZNL6 1462 aa20.1■□□□□ 0.81
CCDC163-208ENST00000629670 CYB5RLQ6IPT4 315 aa20.07■□□□□ 0.8
CCDC163-208ENST00000629670 CHD1O14646 1710 aa20.06■□□□□ 0.8
CCDC163-208ENST00000629670 WDR97A6NE52 1622 aa20.05■□□□□ 0.8
CCDC163-208ENST00000629670 CHMP7Q8WUX9 453 aaPredicted RBP20.05■□□□□ 0.8
CCDC163-208ENST00000629670 CUX1P39880 1505 aa20.04■□□□□ 0.8
CCDC163-208ENST00000629670 SNAPC4Q5SXM2 1469 aa20.01■□□□□ 0.79
CCDC163-208ENST00000629670 GRIN2BQ13224 1484 aa19.99■□□□□ 0.79
CCDC163-208ENST00000629670 MAGI1Q96QZ7 1491 aaPredicted RBP19.99■□□□□ 0.79
CCDC163-208ENST00000629670 SYNJ1O43426 1573 aa19.92■□□□□ 0.78
CCDC163-208ENST00000629670 SYNJ2O15056 1496 aa19.92■□□□□ 0.78
CCDC163-208ENST00000629670 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
CCDC163-208ENST00000629670 ARAP1Q96P48 1450 aa19.92■□□□□ 0.78
CCDC163-208ENST00000629670 TRHP20396 242 aaPredicted RBP19.89■□□□□ 0.77
CCDC163-208ENST00000629670 ABCA10Q8WWZ4 1543 aa19.87■□□□□ 0.77
CCDC163-208ENST00000629670 CLASP1Q7Z460 1538 aa19.86■□□□□ 0.77
CCDC163-208ENST00000629670 WRNQ14191 1432 aaPredicted RBP eCLIP19.85■□□□□ 0.77
CCDC163-208ENST00000629670 PBRM1Q86U86 1689 aa19.81■□□□□ 0.76
CCDC163-208ENST00000629670 ABCA5Q8WWZ7 1642 aa19.79■□□□□ 0.76
CCDC163-208ENST00000629670 TOP2BQ02880 1626 aa19.74■□□□□ 0.75
CCDC163-208ENST00000629670 BIVM-ERCC5R4GMW8 1640 aa19.72■□□□□ 0.75
CCDC163-208ENST00000629670 GRIN2AQ12879 1464 aa19.71■□□□□ 0.75
CCDC163-208ENST00000629670 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
CCDC163-208ENST00000629670 ADAMTS12P58397 1594 aa19.66■□□□□ 0.74
CCDC163-208ENST00000629670 ERICH3Q5RHP9 1530 aa19.64■□□□□ 0.73
CCDC163-208ENST00000629670 NUP160Q12769 1436 aa19.63■□□□□ 0.73
CCDC163-208ENST00000629670 CEP170Q5SW79 1584 aa19.58■□□□□ 0.73
CCDC163-208ENST00000629670 ERCC6L2Q5T890 1561 aa19.52■□□□□ 0.71
CCDC163-208ENST00000629670 JPH4Q96JJ6 628 aa19.51■□□□□ 0.71
CCDC163-208ENST00000629670 SHROOM2Q13796 1616 aa19.49■□□□□ 0.71
CCDC163-208ENST00000629670 PRG4Q92954 1404 aaPredicted RBP19.49■□□□□ 0.71
CCDC163-208ENST00000629670 KIF27Q86VH2 1401 aa19.44■□□□□ 0.7
CCDC163-208ENST00000629670 NPM1P06748 294 aaKnown RBP eCLIP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms