RNA–Protein interactions for RNA: ENST00000629318.1

KCNQ2-216, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 4

Gene KCNQ2, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-216ENST00000629318 NISCHQ9Y2I1 1504 aa36.72■■■■□ 3.47
KCNQ2-216ENST00000629318 CCDC180Q9P1Z9 1646 aa32.64■■■□□ 2.82
KCNQ2-216ENST00000629318 ABCC9O60706 1549 aa31.98■■■□□ 2.71
KCNQ2-216ENST00000629318 RB1CC1Q8TDY2 1594 aa30.74■■■□□ 2.51
KCNQ2-216ENST00000629318 NACADO15069 1562 aa30.71■■■□□ 2.51
KCNQ2-216ENST00000629318 ZCCHC6Q5VYS8 1495 aaKnown RBP30.6■■■□□ 2.49
KCNQ2-216ENST00000629318 MYO15BQ96JP2 1530 aa30.57■■■□□ 2.48
KCNQ2-216ENST00000629318 DCAF8L2P0C7V8 631 aa30.55■■■□□ 2.48
KCNQ2-216ENST00000629318 DCAF1Q9Y4B6 1507 aa30.41■■■□□ 2.46
KCNQ2-216ENST00000629318 UNC13AQ9UPW8 1703 aa30.05■■■□□ 2.4
KCNQ2-216ENST00000629318 BICRAQ9NZM4 1560 aa29.89■■■□□ 2.38
KCNQ2-216ENST00000629318 PABPN1Q86U42 306 aaKnown RBP eCLIP29.87■■■□□ 2.37
KCNQ2-216ENST00000629318 SCRIBQ14160 1630 aa29.76■■■□□ 2.35
KCNQ2-216ENST00000629318 SHROOM4Q9ULL8 1493 aa29.55■■■□□ 2.32
KCNQ2-216ENST00000629318 DNAJC5BQ9UF47 199 aa29.48■■■□□ 2.31
KCNQ2-216ENST00000629318 EIF4G1Q04637 1599 aaKnown RBP29.06■■■□□ 2.24
KCNQ2-216ENST00000629318 CC2D2AQ9P2K1 1620 aa28.94■■■□□ 2.22
KCNQ2-216ENST00000629318 CECR2Q9BXF3 1484 aa28.76■■■□□ 2.19
KCNQ2-216ENST00000629318 SMARCA4P51532 1647 aa28.49■■■□□ 2.15
KCNQ2-216ENST00000629318 BAZ1AQ9NRL2 1556 aaPredicted RBP28.44■■■□□ 2.14
KCNQ2-216ENST00000629318 ATAD2BQ9ULI0 1458 aa28.38■■■□□ 2.13
KCNQ2-216ENST00000629318 NCAPD3P42695 1498 aa28.37■■■□□ 2.13
KCNQ2-216ENST00000629318 MROH2BQ7Z745 1585 aa28.3■■■□□ 2.12
KCNQ2-216ENST00000629318 SMARCA2P51531 1590 aa28.29■■■□□ 2.12
KCNQ2-216ENST00000629318 PEG3Q9GZU2 1588 aa28.26■■■□□ 2.11
KCNQ2-216ENST00000629318 HMGXB3Q12766 1538 aa28.22■■■□□ 2.11
KCNQ2-216ENST00000629318 BAZ1BQ9UIG0 1483 aaKnown RBP28.08■■■□□ 2.09
KCNQ2-216ENST00000629318 RSF1Q96T23 1441 aaPredicted RBP27.97■■■□□ 2.07
KCNQ2-216ENST00000629318 WIZO95785 1651 aa27.96■■■□□ 2.07
KCNQ2-216ENST00000629318 NESP48681 1621 aa27.69■■■□□ 2.02
KCNQ2-216ENST00000629318 TOP2AP11388 1531 aaKnown RBP27.68■■■□□ 2.02
KCNQ2-216ENST00000629318 LAMC3Q9Y6N6 1575 aa27.6■■■□□ 2.01
KCNQ2-216ENST00000629318 ERCC6Q03468 1493 aa27.52■■■□□ 2
KCNQ2-216ENST00000629318 CADPSQ9ULU8 1353 aa27.52■■■□□ 2
KCNQ2-216ENST00000629318 SUPT5HO00267 1087 aaKnown RBP27.5■■□□□ 1.99
KCNQ2-216ENST00000629318 PDS5BQ9NTI5 1447 aa27.4■■□□□ 1.98
KCNQ2-216ENST00000629318 CFTRP13569 1480 aa27.37■■□□□ 1.97
KCNQ2-216ENST00000629318 CCDC88BA6NC98 1476 aa27.36■■□□□ 1.97
KCNQ2-216ENST00000629318 KIF21AQ7Z4S6 1674 aa27.33■■□□□ 1.97
KCNQ2-216ENST00000629318 CUX2O14529 1486 aa27.32■■□□□ 1.96
KCNQ2-216ENST00000629318 THOC2Q8NI27 1593 aaKnown RBP27.3■■□□□ 1.96
KCNQ2-216ENST00000629318 FANCD2Q9BXW9 1451 aa27.19■■□□□ 1.94
KCNQ2-216ENST00000629318 CEP164Q9UPV0 1460 aa27.14■■□□□ 1.94
KCNQ2-216ENST00000629318 MRC2Q9UBG0 1479 aa27.13■■□□□ 1.93
KCNQ2-216ENST00000629318 PRDM2Q13029 1718 aa27.08■■□□□ 1.93
KCNQ2-216ENST00000629318 WDR62O43379 1518 aa27.07■■□□□ 1.92
KCNQ2-216ENST00000629318 URB2Q14146 1524 aaKnown RBP26.95■■□□□ 1.91
KCNQ2-216ENST00000629318 TOPBP1Q92547 1522 aa26.76■■□□□ 1.87
KCNQ2-216ENST00000629318 ABCC8Q09428 1581 aa26.72■■□□□ 1.87
KCNQ2-216ENST00000629318 DNMBPQ6XZF7 1577 aa26.71■■□□□ 1.87
KCNQ2-216ENST00000629318 IFT140Q96RY7 1462 aa26.6■■□□□ 1.85
KCNQ2-216ENST00000629318 CUX1P39880 1505 aa26.55■■□□□ 1.84
KCNQ2-216ENST00000629318 DNAJC5Q9H3Z4 198 aa26.55■■□□□ 1.84
KCNQ2-216ENST00000629318 POLA1P09884 1462 aaPredicted RBP26.54■■□□□ 1.84
KCNQ2-216ENST00000629318 ZNF608Q9ULD9 1512 aaPredicted RBP26.51■■□□□ 1.83
KCNQ2-216ENST00000629318 TARBP1Q13395 1621 aaKnown RBP26.49■■□□□ 1.83
KCNQ2-216ENST00000629318 FGD5Q6ZNL6 1462 aa26.45■■□□□ 1.82
KCNQ2-216ENST00000629318 RAD54L2Q9Y4B4 1467 aa26.42■■□□□ 1.82
KCNQ2-216ENST00000629318 CHIC1Q5VXU3 224 aa26.4■■□□□ 1.82
KCNQ2-216ENST00000629318 SOGA1O94964 1423 aa26.39■■□□□ 1.82
KCNQ2-216ENST00000629318 EIF4G3O43432 1585 aaKnown RBP26.37■■□□□ 1.81
KCNQ2-216ENST00000629318 WRNQ14191 1432 aaPredicted RBP eCLIP26.33■■□□□ 1.81
KCNQ2-216ENST00000629318 AQRO60306 1485 aaKnown RBP eCLIP26.33■■□□□ 1.81
KCNQ2-216ENST00000629318 SYNJ1O43426 1573 aa26.29■■□□□ 1.8
KCNQ2-216ENST00000629318 TOP2BQ02880 1626 aa26.29■■□□□ 1.8
KCNQ2-216ENST00000629318 BIVM-ERCC5R4GMW8 1640 aa26.28■■□□□ 1.8
KCNQ2-216ENST00000629318 WDR97A6NE52 1622 aa26.26■■□□□ 1.79
KCNQ2-216ENST00000629318 TDRD9Q8NDG6 1382 aaKnown RBP26.26■■□□□ 1.79
KCNQ2-216ENST00000629318 ABCA10Q8WWZ4 1543 aa26.22■■□□□ 1.79
KCNQ2-216ENST00000629318 OSCARQ8IYS5 282 aa26.13■■□□□ 1.77
KCNQ2-216ENST00000629318 ABCA5Q8WWZ7 1642 aa26.11■■□□□ 1.77
KCNQ2-216ENST00000629318 GRIN2BQ13224 1484 aa26.11■■□□□ 1.77
KCNQ2-216ENST00000629318 GAPVD1Q14C86 1478 aa26.09■■□□□ 1.77
KCNQ2-216ENST00000629318 SNAPC4Q5SXM2 1469 aa26.09■■□□□ 1.77
KCNQ2-216ENST00000629318 MAGI1Q96QZ7 1491 aaPredicted RBP26.04■■□□□ 1.76
KCNQ2-216ENST00000629318 TRIM41Q8WV44 630 aa26.04■■□□□ 1.76
KCNQ2-216ENST00000629318 PBRM1Q86U86 1689 aa26.02■■□□□ 1.76
KCNQ2-216ENST00000629318 CHD1O14646 1710 aa26.02■■□□□ 1.76
KCNQ2-216ENST00000629318 SYNJ2O15056 1496 aa25.95■■□□□ 1.74
KCNQ2-216ENST00000629318 FBLN2P98095 1184 aa25.93■■□□□ 1.74
KCNQ2-216ENST00000629318 ERICH3Q5RHP9 1530 aa25.88■■□□□ 1.73
KCNQ2-216ENST00000629318 CHMP7Q8WUX9 453 aaPredicted RBP25.88■■□□□ 1.73
KCNQ2-216ENST00000629318 ADAMTS12P58397 1594 aa25.86■■□□□ 1.73
KCNQ2-216ENST00000629318 CLASP1Q7Z460 1538 aa25.81■■□□□ 1.72
KCNQ2-216ENST00000629318 FHAD1B1AJZ9 1412 aa25.8■■□□□ 1.72
KCNQ2-216ENST00000629318 GRIN2AQ12879 1464 aa25.78■■□□□ 1.72
KCNQ2-216ENST00000629318 KIF27Q86VH2 1401 aa25.77■■□□□ 1.72
KCNQ2-216ENST00000629318 ARHGEF11O15085 1522 aa25.76■■□□□ 1.71
KCNQ2-216ENST00000629318 RIMBP3CA6NJZ7 1639 aa25.76■■□□□ 1.71
KCNQ2-216ENST00000629318 RIMBP3BA6NNM3 1639 aa25.76■■□□□ 1.71
KCNQ2-216ENST00000629318 RIMBP3Q9UFD9 1639 aa25.76■■□□□ 1.71
KCNQ2-216ENST00000629318 IGF1RP08069 1367 aa25.72■■□□□ 1.71
KCNQ2-216ENST00000629318 NUP160Q12769 1436 aa25.71■■□□□ 1.71
KCNQ2-216ENST00000629318 CEP170Q5SW79 1584 aa25.66■■□□□ 1.7
KCNQ2-216ENST00000629318 EEA1Q15075 1411 aa25.66■■□□□ 1.7
KCNQ2-216ENST00000629318 CUL7Q14999 1698 aa25.61■■□□□ 1.69
KCNQ2-216ENST00000629318 ARAP1Q96P48 1450 aa25.58■■□□□ 1.69
KCNQ2-216ENST00000629318 RUSC2Q8N2Y8 1516 aa25.57■■□□□ 1.68
KCNQ2-216ENST00000629318 CARMIL1Q5VZK9 1371 aa25.53■■□□□ 1.68
KCNQ2-216ENST00000629318 SHROOM2Q13796 1616 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms