RNA–Protein interactions for RNA: ENST00000629273.2

SOX2-OT-251, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 575 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-251ENST00000629273 NISCHQ9Y2I1 1504 aa35.36■■■■□ 3.25
SOX2-OT-251ENST00000629273 CCDC180Q9P1Z9 1646 aa31.47■■■□□ 2.63
SOX2-OT-251ENST00000629273 ABCC9O60706 1549 aa30.58■■■□□ 2.49
SOX2-OT-251ENST00000629273 ZCCHC6Q5VYS8 1495 aaKnown RBP29.51■■■□□ 2.31
SOX2-OT-251ENST00000629273 RB1CC1Q8TDY2 1594 aa29.5■■■□□ 2.31
SOX2-OT-251ENST00000629273 NACADO15069 1562 aa29.49■■■□□ 2.31
SOX2-OT-251ENST00000629273 MYO15BQ96JP2 1530 aa29.36■■■□□ 2.29
SOX2-OT-251ENST00000629273 DCAF1Q9Y4B6 1507 aa29.28■■■□□ 2.28
SOX2-OT-251ENST00000629273 DCAF8L2P0C7V8 631 aa29.27■■■□□ 2.28
SOX2-OT-251ENST00000629273 UNC13AQ9UPW8 1703 aa28.97■■■□□ 2.23
SOX2-OT-251ENST00000629273 SCRIBQ14160 1630 aa28.68■■■□□ 2.18
SOX2-OT-251ENST00000629273 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
SOX2-OT-251ENST00000629273 PABPN1Q86U42 306 aaKnown RBP eCLIP28.52■■■□□ 2.16
SOX2-OT-251ENST00000629273 SHROOM4Q9ULL8 1493 aa28.34■■■□□ 2.13
SOX2-OT-251ENST00000629273 DNAJC5BQ9UF47 199 aa28.06■■■□□ 2.08
SOX2-OT-251ENST00000629273 EIF4G1Q04637 1599 aaKnown RBP27.87■■■□□ 2.05
SOX2-OT-251ENST00000629273 CC2D2AQ9P2K1 1620 aa27.74■■■□□ 2.03
SOX2-OT-251ENST00000629273 CECR2Q9BXF3 1484 aa27.52■■■□□ 2
SOX2-OT-251ENST00000629273 SMARCA4P51532 1647 aa27.45■■□□□ 1.99
SOX2-OT-251ENST00000629273 BAZ1AQ9NRL2 1556 aaPredicted RBP27.39■■□□□ 1.98
SOX2-OT-251ENST00000629273 MROH2BQ7Z745 1585 aa27.26■■□□□ 1.96
SOX2-OT-251ENST00000629273 ATAD2BQ9ULI0 1458 aa27.23■■□□□ 1.95
SOX2-OT-251ENST00000629273 SMARCA2P51531 1590 aa27.2■■□□□ 1.94
SOX2-OT-251ENST00000629273 PEG3Q9GZU2 1588 aa27.2■■□□□ 1.94
SOX2-OT-251ENST00000629273 NCAPD3P42695 1498 aa27.18■■□□□ 1.94
SOX2-OT-251ENST00000629273 HMGXB3Q12766 1538 aa27.12■■□□□ 1.93
SOX2-OT-251ENST00000629273 WIZO95785 1651 aa27■■□□□ 1.91
SOX2-OT-251ENST00000629273 BAZ1BQ9UIG0 1483 aaKnown RBP27■■□□□ 1.91
SOX2-OT-251ENST00000629273 RSF1Q96T23 1441 aaPredicted RBP26.95■■□□□ 1.9
SOX2-OT-251ENST00000629273 TOP2AP11388 1531 aaKnown RBP26.7■■□□□ 1.87
SOX2-OT-251ENST00000629273 NESP48681 1621 aa26.54■■□□□ 1.84
SOX2-OT-251ENST00000629273 LAMC3Q9Y6N6 1575 aa26.49■■□□□ 1.83
SOX2-OT-251ENST00000629273 CADPSQ9ULU8 1353 aa26.35■■□□□ 1.81
SOX2-OT-251ENST00000629273 CCDC88BA6NC98 1476 aa26.34■■□□□ 1.81
SOX2-OT-251ENST00000629273 ERCC6Q03468 1493 aa26.31■■□□□ 1.8
SOX2-OT-251ENST00000629273 KIF21AQ7Z4S6 1674 aa26.3■■□□□ 1.8
SOX2-OT-251ENST00000629273 CFTRP13569 1480 aa26.27■■□□□ 1.8
SOX2-OT-251ENST00000629273 PRDM2Q13029 1718 aa26.22■■□□□ 1.79
SOX2-OT-251ENST00000629273 PDS5BQ9NTI5 1447 aa26.22■■□□□ 1.79
SOX2-OT-251ENST00000629273 THOC2Q8NI27 1593 aaKnown RBP26.2■■□□□ 1.78
SOX2-OT-251ENST00000629273 SUPT5HO00267 1087 aaKnown RBP26.19■■□□□ 1.78
SOX2-OT-251ENST00000629273 FANCD2Q9BXW9 1451 aa26.1■■□□□ 1.77
SOX2-OT-251ENST00000629273 CUX2O14529 1486 aa26.06■■□□□ 1.76
SOX2-OT-251ENST00000629273 CEP164Q9UPV0 1460 aa26.06■■□□□ 1.76
SOX2-OT-251ENST00000629273 MRC2Q9UBG0 1479 aa26.01■■□□□ 1.75
SOX2-OT-251ENST00000629273 WDR62O43379 1518 aa25.97■■□□□ 1.75
SOX2-OT-251ENST00000629273 URB2Q14146 1524 aaKnown RBP25.87■■□□□ 1.73
SOX2-OT-251ENST00000629273 DNMBPQ6XZF7 1577 aa25.71■■□□□ 1.71
SOX2-OT-251ENST00000629273 TOPBP1Q92547 1522 aa25.71■■□□□ 1.71
SOX2-OT-251ENST00000629273 ABCC8Q09428 1581 aa25.65■■□□□ 1.7
SOX2-OT-251ENST00000629273 CUX1P39880 1505 aa25.58■■□□□ 1.69
SOX2-OT-251ENST00000629273 POLA1P09884 1462 aaPredicted RBP25.5■■□□□ 1.67
SOX2-OT-251ENST00000629273 IFT140Q96RY7 1462 aa25.49■■□□□ 1.67
SOX2-OT-251ENST00000629273 TARBP1Q13395 1621 aaKnown RBP25.48■■□□□ 1.67
SOX2-OT-251ENST00000629273 FGD5Q6ZNL6 1462 aa25.45■■□□□ 1.66
SOX2-OT-251ENST00000629273 BIVM-ERCC5R4GMW8 1640 aa25.42■■□□□ 1.66
SOX2-OT-251ENST00000629273 SYNJ1O43426 1573 aa25.41■■□□□ 1.66
SOX2-OT-251ENST00000629273 ZNF608Q9ULD9 1512 aaPredicted RBP25.41■■□□□ 1.66
SOX2-OT-251ENST00000629273 TOP2BQ02880 1626 aa25.39■■□□□ 1.66
SOX2-OT-251ENST00000629273 WRNQ14191 1432 aaPredicted RBP eCLIP25.37■■□□□ 1.65
SOX2-OT-251ENST00000629273 EIF4G3O43432 1585 aaKnown RBP25.37■■□□□ 1.65
SOX2-OT-251ENST00000629273 RAD54L2Q9Y4B4 1467 aa25.36■■□□□ 1.65
SOX2-OT-251ENST00000629273 WDR97A6NE52 1622 aa25.36■■□□□ 1.65
SOX2-OT-251ENST00000629273 DNAJC5Q9H3Z4 198 aa25.35■■□□□ 1.65
SOX2-OT-251ENST00000629273 SOGA1O94964 1423 aa25.31■■□□□ 1.64
SOX2-OT-251ENST00000629273 AQRO60306 1485 aaKnown RBP eCLIP25.22■■□□□ 1.63
SOX2-OT-251ENST00000629273 ABCA10Q8WWZ4 1543 aa25.21■■□□□ 1.63
SOX2-OT-251ENST00000629273 ABCA5Q8WWZ7 1642 aa25.18■■□□□ 1.62
SOX2-OT-251ENST00000629273 TDRD9Q8NDG6 1382 aaKnown RBP25.17■■□□□ 1.62
SOX2-OT-251ENST00000629273 PBRM1Q86U86 1689 aa25.13■■□□□ 1.61
SOX2-OT-251ENST00000629273 GAPVD1Q14C86 1478 aa25.07■■□□□ 1.6
SOX2-OT-251ENST00000629273 GRIN2BQ13224 1484 aa25.05■■□□□ 1.6
SOX2-OT-251ENST00000629273 CHD1O14646 1710 aa25.05■■□□□ 1.6
SOX2-OT-251ENST00000629273 SNAPC4Q5SXM2 1469 aa25.04■■□□□ 1.6
SOX2-OT-251ENST00000629273 MAGI1Q96QZ7 1491 aaPredicted RBP25■■□□□ 1.59
SOX2-OT-251ENST00000629273 ADAMTS12P58397 1594 aa24.92■■□□□ 1.58
SOX2-OT-251ENST00000629273 ERICH3Q5RHP9 1530 aa24.91■■□□□ 1.58
SOX2-OT-251ENST00000629273 SYNJ2O15056 1496 aa24.89■■□□□ 1.58
SOX2-OT-251ENST00000629273 OSCARQ8IYS5 282 aa24.86■■□□□ 1.57
SOX2-OT-251ENST00000629273 KIF27Q86VH2 1401 aa24.81■■□□□ 1.56
SOX2-OT-251ENST00000629273 FBLN2P98095 1184 aa24.78■■□□□ 1.56
SOX2-OT-251ENST00000629273 FHAD1B1AJZ9 1412 aa24.77■■□□□ 1.56
SOX2-OT-251ENST00000629273 GRIN2AQ12879 1464 aa24.76■■□□□ 1.55
SOX2-OT-251ENST00000629273 CLASP1Q7Z460 1538 aa24.76■■□□□ 1.55
SOX2-OT-251ENST00000629273 CHMP7Q8WUX9 453 aaPredicted RBP24.74■■□□□ 1.55
SOX2-OT-251ENST00000629273 CUL7Q14999 1698 aa24.74■■□□□ 1.55
SOX2-OT-251ENST00000629273 TRIM41Q8WV44 630 aa24.72■■□□□ 1.55
SOX2-OT-251ENST00000629273 IGF1RP08069 1367 aa24.7■■□□□ 1.55
SOX2-OT-251ENST00000629273 CEP170Q5SW79 1584 aa24.68■■□□□ 1.54
SOX2-OT-251ENST00000629273 RUSC2Q8N2Y8 1516 aa24.68■■□□□ 1.54
SOX2-OT-251ENST00000629273 NUP160Q12769 1436 aa24.66■■□□□ 1.54
SOX2-OT-251ENST00000629273 RIMBP3CA6NJZ7 1639 aa24.64■■□□□ 1.53
SOX2-OT-251ENST00000629273 RIMBP3BA6NNM3 1639 aa24.64■■□□□ 1.53
SOX2-OT-251ENST00000629273 RIMBP3Q9UFD9 1639 aa24.64■■□□□ 1.53
SOX2-OT-251ENST00000629273 ARHGEF11O15085 1522 aa24.61■■□□□ 1.53
SOX2-OT-251ENST00000629273 CARMIL1Q5VZK9 1371 aa24.54■■□□□ 1.52
SOX2-OT-251ENST00000629273 CHIC1Q5VXU3 224 aa24.54■■□□□ 1.52
SOX2-OT-251ENST00000629273 SHROOM2Q13796 1616 aa24.53■■□□□ 1.52
SOX2-OT-251ENST00000629273 RAPGEF2Q9Y4G8 1499 aa24.45■■□□□ 1.5
SOX2-OT-251ENST00000629273 ARAP1Q96P48 1450 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms