RNA–Protein interactions for RNA: ENST00000629052.1

LINC00506-202, long intergenic non-protein coding RNA 506, humanhuman

TSL 4

Gene LINC00506, Length 553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00506-202ENST00000629052 NISCHQ9Y2I1 1504 aa17.95■□□□□ 0.46
LINC00506-202ENST00000629052 CCDC180Q9P1Z9 1646 aa15.66■□□□□ 0.1
LINC00506-202ENST00000629052 ZCCHC6Q5VYS8 1495 aaKnown RBP15.08■□□□□ 0.01
LINC00506-202ENST00000629052 ABCC9O60706 1549 aa14.91□□□□□ -0.02
LINC00506-202ENST00000629052 DCAF8L2P0C7V8 631 aa14.87□□□□□ -0.03
LINC00506-202ENST00000629052 DCAF1Q9Y4B6 1507 aa14.77□□□□□ -0.04
LINC00506-202ENST00000629052 SHROOM4Q9ULL8 1493 aa14.75□□□□□ -0.05
LINC00506-202ENST00000629052 MYO15BQ96JP2 1530 aa14.57□□□□□ -0.08
LINC00506-202ENST00000629052 NACADO15069 1562 aa14.56□□□□□ -0.08
LINC00506-202ENST00000629052 SCRIBQ14160 1630 aa14.49□□□□□ -0.09
LINC00506-202ENST00000629052 RB1CC1Q8TDY2 1594 aa14.46□□□□□ -0.09
LINC00506-202ENST00000629052 UNC13AQ9UPW8 1703 aa14.29□□□□□ -0.12
LINC00506-202ENST00000629052 SUPT5HO00267 1087 aaKnown RBP14.11□□□□□ -0.15
LINC00506-202ENST00000629052 BICRAQ9NZM4 1560 aa14.1□□□□□ -0.15
LINC00506-202ENST00000629052 PABPN1Q86U42 306 aaKnown RBP eCLIP14.05□□□□□ -0.16
LINC00506-202ENST00000629052 CECR2Q9BXF3 1484 aa14.02□□□□□ -0.16
LINC00506-202ENST00000629052 RSF1Q96T23 1441 aaPredicted RBP13.93□□□□□ -0.18
LINC00506-202ENST00000629052 MROH2BQ7Z745 1585 aa13.92□□□□□ -0.18
LINC00506-202ENST00000629052 WIZO95785 1651 aa13.85□□□□□ -0.19
LINC00506-202ENST00000629052 BAZ1AQ9NRL2 1556 aaPredicted RBP13.84□□□□□ -0.19
LINC00506-202ENST00000629052 SMARCA4P51532 1647 aa13.84□□□□□ -0.19
LINC00506-202ENST00000629052 EIF4G1Q04637 1599 aaKnown RBP13.64□□□□□ -0.23
LINC00506-202ENST00000629052 TOP2AP11388 1531 aaKnown RBP13.64□□□□□ -0.23
LINC00506-202ENST00000629052 PEG3Q9GZU2 1588 aa13.61□□□□□ -0.23
LINC00506-202ENST00000629052 ATAD2BQ9ULI0 1458 aa13.59□□□□□ -0.23
LINC00506-202ENST00000629052 DNAJC5BQ9UF47 199 aa13.58□□□□□ -0.24
LINC00506-202ENST00000629052 SMARCA2P51531 1590 aa13.54□□□□□ -0.24
LINC00506-202ENST00000629052 BAZ1BQ9UIG0 1483 aaKnown RBP13.51□□□□□ -0.25
LINC00506-202ENST00000629052 CCDC88BA6NC98 1476 aa13.5□□□□□ -0.25
LINC00506-202ENST00000629052 CHIC1Q5VXU3 224 aa13.47□□□□□ -0.25
LINC00506-202ENST00000629052 CC2D2AQ9P2K1 1620 aa13.46□□□□□ -0.25
LINC00506-202ENST00000629052 HMGXB3Q12766 1538 aa13.43□□□□□ -0.26
LINC00506-202ENST00000629052 NCAPD3P42695 1498 aa13.42□□□□□ -0.26
LINC00506-202ENST00000629052 ABCC8Q09428 1581 aa13.28□□□□□ -0.28
LINC00506-202ENST00000629052 TRIM41Q8WV44 630 aa13.2□□□□□ -0.3
LINC00506-202ENST00000629052 CFTRP13569 1480 aa13.14□□□□□ -0.31
LINC00506-202ENST00000629052 PRDM2Q13029 1718 aa13.13□□□□□ -0.31
LINC00506-202ENST00000629052 SYNJ1O43426 1573 aa13.12□□□□□ -0.31
LINC00506-202ENST00000629052 NESP48681 1621 aa13.1□□□□□ -0.31
LINC00506-202ENST00000629052 WRNQ14191 1432 aaPredicted RBP eCLIP13.1□□□□□ -0.31
LINC00506-202ENST00000629052 CADPSQ9ULU8 1353 aa13.09□□□□□ -0.31
LINC00506-202ENST00000629052 FAM9AQ8IZU1 332 aaPredicted RBP13.07□□□□□ -0.32
LINC00506-202ENST00000629052 CUX1P39880 1505 aa13.02□□□□□ -0.33
LINC00506-202ENST00000629052 BIVM-ERCC5R4GMW8 1640 aa13.02□□□□□ -0.33
LINC00506-202ENST00000629052 TOP2BQ02880 1626 aa13.01□□□□□ -0.33
LINC00506-202ENST00000629052 LOC105371045A0A1W2PR82 267 aa13□□□□□ -0.33
LINC00506-202ENST00000629052 LAMC3Q9Y6N6 1575 aa12.99□□□□□ -0.33
LINC00506-202ENST00000629052 FANCD2Q9BXW9 1451 aa12.99□□□□□ -0.33
LINC00506-202ENST00000629052 SOGA1O94964 1423 aa12.98□□□□□ -0.33
LINC00506-202ENST00000629052 RUSC2Q8N2Y8 1516 aa12.98□□□□□ -0.33
LINC00506-202ENST00000629052 EHMT2Q96KQ7 1210 aa12.95□□□□□ -0.34
LINC00506-202ENST00000629052 KIF21AQ7Z4S6 1674 aa12.95□□□□□ -0.34
LINC00506-202ENST00000629052 CEP164Q9UPV0 1460 aa12.9□□□□□ -0.34
LINC00506-202ENST00000629052 DNMBPQ6XZF7 1577 aa12.87□□□□□ -0.35
LINC00506-202ENST00000629052 FGD5Q6ZNL6 1462 aa12.87□□□□□ -0.35
LINC00506-202ENST00000629052 URB2Q14146 1524 aaKnown RBP12.87□□□□□ -0.35
LINC00506-202ENST00000629052 TOPBP1Q92547 1522 aa12.86□□□□□ -0.35
LINC00506-202ENST00000629052 PDS5BQ9NTI5 1447 aa12.86□□□□□ -0.35
LINC00506-202ENST00000629052 EEA1Q15075 1411 aa12.82□□□□□ -0.36
LINC00506-202ENST00000629052 CSRNP3Q8WYN3 585 aa12.8□□□□□ -0.36
LINC00506-202ENST00000629052 RAD54L2Q9Y4B4 1467 aa12.79□□□□□ -0.36
LINC00506-202ENST00000629052 POLA1P09884 1462 aaPredicted RBP12.78□□□□□ -0.36
LINC00506-202ENST00000629052 CUX2O14529 1486 aa12.77□□□□□ -0.37
LINC00506-202ENST00000629052 MRC2Q9UBG0 1479 aa12.76□□□□□ -0.37
LINC00506-202ENST00000629052 KIF21BO75037 1637 aa12.75□□□□□ -0.37
LINC00506-202ENST00000629052 WDR97A6NE52 1622 aa12.74□□□□□ -0.37
LINC00506-202ENST00000629052 KIF27Q86VH2 1401 aa12.73□□□□□ -0.37
LINC00506-202ENST00000629052 ERCC6Q03468 1493 aa12.72□□□□□ -0.37
LINC00506-202ENST00000629052 GOLGA3Q08378 1498 aa12.72□□□□□ -0.37
LINC00506-202ENST00000629052 THOC2Q8NI27 1593 aaKnown RBP12.71□□□□□ -0.37
LINC00506-202ENST00000629052 RAPGEF2Q9Y4G8 1499 aa12.71□□□□□ -0.38
LINC00506-202ENST00000629052 WDR62O43379 1518 aa12.7□□□□□ -0.38
LINC00506-202ENST00000629052 ABCA10Q8WWZ4 1543 aa12.7□□□□□ -0.38
LINC00506-202ENST00000629052 TARBP1Q13395 1621 aaKnown RBP12.68□□□□□ -0.38
LINC00506-202ENST00000629052 PRXQ9BXM0 1461 aa12.67□□□□□ -0.38
LINC00506-202ENST00000629052 UBTFP17480 764 aaKnown RBP12.65□□□□□ -0.38
LINC00506-202ENST00000629052 IGF1RP08069 1367 aa12.65□□□□□ -0.38
LINC00506-202ENST00000629052 ABCA5Q8WWZ7 1642 aa12.65□□□□□ -0.38
LINC00506-202ENST00000629052 TNIKQ9UKE5 1360 aa12.65□□□□□ -0.38
LINC00506-202ENST00000629052 DNAJC5Q9H3Z4 198 aa12.64□□□□□ -0.39
LINC00506-202ENST00000629052 TDRD9Q8NDG6 1382 aaKnown RBP12.64□□□□□ -0.39
LINC00506-202ENST00000629052 ERICH3Q5RHP9 1530 aa12.63□□□□□ -0.39
LINC00506-202ENST00000629052 CEP162Q5TB80 1403 aa12.62□□□□□ -0.39
LINC00506-202ENST00000629052 PBRM1Q86U86 1689 aa12.6□□□□□ -0.39
LINC00506-202ENST00000629052 ZNF608Q9ULD9 1512 aaPredicted RBP12.59□□□□□ -0.39
LINC00506-202ENST00000629052 GAPVD1Q14C86 1478 aa12.59□□□□□ -0.39
LINC00506-202ENST00000629052 CARMIL1Q5VZK9 1371 aa12.57□□□□□ -0.4
LINC00506-202ENST00000629052 AQRO60306 1485 aaKnown RBP eCLIP12.57□□□□□ -0.4
LINC00506-202ENST00000629052 IFT140Q96RY7 1462 aa12.57□□□□□ -0.4
LINC00506-202ENST00000629052 RANGAP1P46060 587 aaPredicted RBP12.56□□□□□ -0.4
LINC00506-202ENST00000629052 CUL7Q14999 1698 aa12.56□□□□□ -0.4
LINC00506-202ENST00000629052 EIF4G3O43432 1585 aaKnown RBP12.53□□□□□ -0.4
LINC00506-202ENST00000629052 CLIP1P30622 1438 aa12.52□□□□□ -0.41
LINC00506-202ENST00000629052 ADAMTS12P58397 1594 aa12.5□□□□□ -0.41
LINC00506-202ENST00000629052 CTTNBP2Q8WZ74 1663 aa12.48□□□□□ -0.41
LINC00506-202ENST00000629052 GRIN2BQ13224 1484 aa12.47□□□□□ -0.41
LINC00506-202ENST00000629052 ARAP1Q96P48 1450 aa12.46□□□□□ -0.41
LINC00506-202ENST00000629052 PPARGC1BQ86YN6 1023 aaKnown RBP12.46□□□□□ -0.41
LINC00506-202ENST00000629052 SNAPC4Q5SXM2 1469 aa12.46□□□□□ -0.42
LINC00506-202ENST00000629052 ARHGAP35Q9NRY4 1499 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms