RNA–Protein interactions for RNA: ENST00000628636.2

TCF4-265, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-265ENST00000628636 NISCHQ9Y2I1 1504 aa22.21■■□□□ 1.15
TCF4-265ENST00000628636 ABCC9O60706 1549 aa20.84■□□□□ 0.93
TCF4-265ENST00000628636 CCDC180Q9P1Z9 1646 aa20.24■□□□□ 0.83
TCF4-265ENST00000628636 DNAJC5BQ9UF47 199 aa20.1■□□□□ 0.81
TCF4-265ENST00000628636 RB1CC1Q8TDY2 1594 aa19.57■□□□□ 0.72
TCF4-265ENST00000628636 PABPN1Q86U42 306 aaKnown RBP eCLIP19.3■□□□□ 0.68
TCF4-265ENST00000628636 NACADO15069 1562 aa19.27■□□□□ 0.68
TCF4-265ENST00000628636 UNC13AQ9UPW8 1703 aa19.16■□□□□ 0.66
TCF4-265ENST00000628636 DCAF8L2P0C7V8 631 aa19.06■□□□□ 0.64
TCF4-265ENST00000628636 BICRAQ9NZM4 1560 aa19.01■□□□□ 0.63
TCF4-265ENST00000628636 DNAJC5Q9H3Z4 198 aa18.94■□□□□ 0.62
TCF4-265ENST00000628636 CECR2Q9BXF3 1484 aa18.84■□□□□ 0.61
TCF4-265ENST00000628636 CC2D2AQ9P2K1 1620 aa18.81■□□□□ 0.6
TCF4-265ENST00000628636 MYO15BQ96JP2 1530 aa18.78■□□□□ 0.6
TCF4-265ENST00000628636 SHROOM4Q9ULL8 1493 aa18.69■□□□□ 0.58
TCF4-265ENST00000628636 EIF4G1Q04637 1599 aaKnown RBP18.6■□□□□ 0.57
TCF4-265ENST00000628636 SCRIBQ14160 1630 aa18.4■□□□□ 0.54
TCF4-265ENST00000628636 DCAF1Q9Y4B6 1507 aa18.31■□□□□ 0.52
TCF4-265ENST00000628636 ZCCHC6Q5VYS8 1495 aaKnown RBP18.27■□□□□ 0.52
TCF4-265ENST00000628636 CUX2O14529 1486 aa18.24■□□□□ 0.51
TCF4-265ENST00000628636 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
TCF4-265ENST00000628636 TRIM41Q8WV44 630 aa17.87■□□□□ 0.45
TCF4-265ENST00000628636 NCAPD3P42695 1498 aa17.79■□□□□ 0.44
TCF4-265ENST00000628636 NESP48681 1621 aa17.72■□□□□ 0.43
TCF4-265ENST00000628636 THOC2Q8NI27 1593 aaKnown RBP17.68■□□□□ 0.42
TCF4-265ENST00000628636 ATAD2BQ9ULI0 1458 aa17.64■□□□□ 0.41
TCF4-265ENST00000628636 HMGXB3Q12766 1538 aa17.61■□□□□ 0.41
TCF4-265ENST00000628636 SMARCA2P51531 1590 aa17.58■□□□□ 0.41
TCF4-265ENST00000628636 LAMC3Q9Y6N6 1575 aa17.52■□□□□ 0.39
TCF4-265ENST00000628636 KIF21AQ7Z4S6 1674 aa17.51■□□□□ 0.39
TCF4-265ENST00000628636 SMARCA4P51532 1647 aa17.48■□□□□ 0.39
TCF4-265ENST00000628636 BAZ1BQ9UIG0 1483 aaKnown RBP17.45■□□□□ 0.38
TCF4-265ENST00000628636 PDS5BQ9NTI5 1447 aa17.43■□□□□ 0.38
TCF4-265ENST00000628636 BAZ1AQ9NRL2 1556 aaPredicted RBP17.36■□□□□ 0.37
TCF4-265ENST00000628636 PEG3Q9GZU2 1588 aa17.31■□□□□ 0.36
TCF4-265ENST00000628636 MRC2Q9UBG0 1479 aa17.31■□□□□ 0.36
TCF4-265ENST00000628636 OSCARQ8IYS5 282 aa17.3■□□□□ 0.36
TCF4-265ENST00000628636 WDR62O43379 1518 aa17.28■□□□□ 0.36
TCF4-265ENST00000628636 CADPSQ9ULU8 1353 aa17.22■□□□□ 0.35
TCF4-265ENST00000628636 RIMBP3CA6NJZ7 1639 aa17.15■□□□□ 0.34
TCF4-265ENST00000628636 RIMBP3BA6NNM3 1639 aa17.15■□□□□ 0.34
TCF4-265ENST00000628636 RIMBP3Q9UFD9 1639 aa17.15■□□□□ 0.34
TCF4-265ENST00000628636 CEP164Q9UPV0 1460 aa17.12■□□□□ 0.33
TCF4-265ENST00000628636 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
TCF4-265ENST00000628636 FANCD2Q9BXW9 1451 aa17.04■□□□□ 0.32
TCF4-265ENST00000628636 ARHGEF11O15085 1522 aa17.01■□□□□ 0.31
TCF4-265ENST00000628636 TRHP20396 242 aaPredicted RBP16.98■□□□□ 0.31
TCF4-265ENST00000628636 AEBP2Q6ZN18 517 aaPredicted RBP16.97■□□□□ 0.31
TCF4-265ENST00000628636 CYB5RLQ6IPT4 315 aa16.94■□□□□ 0.3
TCF4-265ENST00000628636 URB2Q14146 1524 aaKnown RBP16.93■□□□□ 0.3
TCF4-265ENST00000628636 WIZO95785 1651 aa16.9■□□□□ 0.3
TCF4-265ENST00000628636 CFTRP13569 1480 aa16.88■□□□□ 0.29
TCF4-265ENST00000628636 ZNF608Q9ULD9 1512 aaPredicted RBP16.81■□□□□ 0.28
TCF4-265ENST00000628636 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
TCF4-265ENST00000628636 IFT140Q96RY7 1462 aa16.8■□□□□ 0.28
TCF4-265ENST00000628636 CHD1O14646 1710 aa16.73■□□□□ 0.27
TCF4-265ENST00000628636 PRDM2Q13029 1718 aa16.73■□□□□ 0.27
TCF4-265ENST00000628636 EIF4G3O43432 1585 aaKnown RBP16.72■□□□□ 0.27
TCF4-265ENST00000628636 RSF1Q96T23 1441 aaPredicted RBP16.7■□□□□ 0.26
TCF4-265ENST00000628636 FBLN2P98095 1184 aa16.64■□□□□ 0.25
TCF4-265ENST00000628636 TOPBP1Q92547 1522 aa16.64■□□□□ 0.25
TCF4-265ENST00000628636 TOP2AP11388 1531 aaKnown RBP16.62■□□□□ 0.25
TCF4-265ENST00000628636 AQRO60306 1485 aaKnown RBP eCLIP16.6■□□□□ 0.25
TCF4-265ENST00000628636 ABCC8Q09428 1581 aa16.58■□□□□ 0.24
TCF4-265ENST00000628636 TARBP1Q13395 1621 aaKnown RBP16.55■□□□□ 0.24
TCF4-265ENST00000628636 DNMBPQ6XZF7 1577 aa16.53■□□□□ 0.24
TCF4-265ENST00000628636 CLASP1Q7Z460 1538 aa16.5■□□□□ 0.23
TCF4-265ENST00000628636 SYNJ1O43426 1573 aa16.45■□□□□ 0.22
TCF4-265ENST00000628636 CCDC88BA6NC98 1476 aa16.43■□□□□ 0.22
TCF4-265ENST00000628636 POLA1P09884 1462 aaPredicted RBP16.42■□□□□ 0.22
TCF4-265ENST00000628636 CHMP7Q8WUX9 453 aaPredicted RBP16.41■□□□□ 0.22
TCF4-265ENST00000628636 SNAPC4Q5SXM2 1469 aa16.41■□□□□ 0.22
TCF4-265ENST00000628636 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
TCF4-265ENST00000628636 GAPVD1Q14C86 1478 aa16.37■□□□□ 0.21
TCF4-265ENST00000628636 RAD54L2Q9Y4B4 1467 aa16.37■□□□□ 0.21
TCF4-265ENST00000628636 SOGA1O94964 1423 aa16.35■□□□□ 0.21
TCF4-265ENST00000628636 MAGI1Q96QZ7 1491 aaPredicted RBP16.35■□□□□ 0.21
TCF4-265ENST00000628636 WDR97A6NE52 1622 aa16.34■□□□□ 0.21
TCF4-265ENST00000628636 SYNJ2O15056 1496 aa16.3■□□□□ 0.2
TCF4-265ENST00000628636 ILDR1Q86SU0 546 aaPredicted RBP16.3■□□□□ 0.2
TCF4-265ENST00000628636 GRIN2BQ13224 1484 aa16.28■□□□□ 0.2
TCF4-265ENST00000628636 FGD5Q6ZNL6 1462 aa16.23■□□□□ 0.19
TCF4-265ENST00000628636 KIF13AQ9H1H9 1805 aa16.22■□□□□ 0.19
TCF4-265ENST00000628636 PBRM1Q86U86 1689 aa16.21■□□□□ 0.18
TCF4-265ENST00000628636 ERCC6L2Q5T890 1561 aa16.19■□□□□ 0.18
TCF4-265ENST00000628636 CUX1P39880 1505 aa16.11■□□□□ 0.17
TCF4-265ENST00000628636 KDM4FA0A1W2PPD8 638 aa16.11■□□□□ 0.17
TCF4-265ENST00000628636 CEP170Q5SW79 1584 aa16.11■□□□□ 0.17
TCF4-265ENST00000628636 GRIN2AQ12879 1464 aa16.07■□□□□ 0.16
TCF4-265ENST00000628636 ABCA5Q8WWZ7 1642 aa16.05■□□□□ 0.16
TCF4-265ENST00000628636 SHROOM2Q13796 1616 aa16.05■□□□□ 0.16
TCF4-265ENST00000628636 FAM69CQ0P6D2 419 aa16.04■□□□□ 0.16
TCF4-265ENST00000628636 NUP160Q12769 1436 aa16.02■□□□□ 0.16
TCF4-265ENST00000628636 ABCC10Q5T3U5 1492 aa16.02■□□□□ 0.15
TCF4-265ENST00000628636 KDM6BO15054 1643 aa16.01■□□□□ 0.15
TCF4-265ENST00000628636 ABCA10Q8WWZ4 1543 aa16.01■□□□□ 0.15
TCF4-265ENST00000628636 ADAMTS12P58397 1594 aa15.98■□□□□ 0.15
TCF4-265ENST00000628636 DIP2BQ9P265 1576 aa15.96■□□□□ 0.15
TCF4-265ENST00000628636 NPM1P06748 294 aaKnown RBP eCLIP15.96■□□□□ 0.15
TCF4-265ENST00000628636 MAPKBP1O60336 1514 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 185.6 ms