RNA–Protein interactions for RNA: ENST00000628324.2

LINC01170-202, Transcript of long intergenic non-protein coding RNA 1170, humanhuman

TSL 2 BASIC

Gene LINC01170, Length 650 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01170-202ENST00000628324 NISCHQ9Y2I1 1504 aa21.37■■□□□ 1.01
LINC01170-202ENST00000628324 ABCC9O60706 1549 aa19.57■□□□□ 0.72
LINC01170-202ENST00000628324 AEBP2Q6ZN18 517 aaPredicted RBP19.45■□□□□ 0.7
LINC01170-202ENST00000628324 CHIC1Q5VXU3 224 aa19.41■□□□□ 0.7
LINC01170-202ENST00000628324 CCDC180Q9P1Z9 1646 aa19.33■□□□□ 0.69
LINC01170-202ENST00000628324 DNAJC5BQ9UF47 199 aa18.86■□□□□ 0.61
LINC01170-202ENST00000628324 RB1CC1Q8TDY2 1594 aa18.54■□□□□ 0.56
LINC01170-202ENST00000628324 NACADO15069 1562 aa18.38■□□□□ 0.53
LINC01170-202ENST00000628324 MYO15BQ96JP2 1530 aa18.15■□□□□ 0.5
LINC01170-202ENST00000628324 PABPN1Q86U42 306 aaKnown RBP eCLIP18.15■□□□□ 0.5
LINC01170-202ENST00000628324 UNC13AQ9UPW8 1703 aa18.13■□□□□ 0.49
LINC01170-202ENST00000628324 BICRAQ9NZM4 1560 aa18.12■□□□□ 0.49
LINC01170-202ENST00000628324 DCAF8L2P0C7V8 631 aa17.89■□□□□ 0.45
LINC01170-202ENST00000628324 SHROOM4Q9ULL8 1493 aa17.88■□□□□ 0.45
LINC01170-202ENST00000628324 DCAF1Q9Y4B6 1507 aa17.74■□□□□ 0.43
LINC01170-202ENST00000628324 CC2D2AQ9P2K1 1620 aa17.73■□□□□ 0.43
LINC01170-202ENST00000628324 CECR2Q9BXF3 1484 aa17.73■□□□□ 0.43
LINC01170-202ENST00000628324 ZCCHC6Q5VYS8 1495 aaKnown RBP17.63■□□□□ 0.41
LINC01170-202ENST00000628324 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
LINC01170-202ENST00000628324 DNAJC5Q9H3Z4 198 aa17.61■□□□□ 0.41
LINC01170-202ENST00000628324 SCRIBQ14160 1630 aa17.43■□□□□ 0.38
LINC01170-202ENST00000628324 CUX2O14529 1486 aa17.15■□□□□ 0.34
LINC01170-202ENST00000628324 PHF23Q9BUL5 403 aaPredicted RBP17.08■□□□□ 0.32
LINC01170-202ENST00000628324 NCAPD3P42695 1498 aa17.04■□□□□ 0.32
LINC01170-202ENST00000628324 ERCC6Q03468 1493 aa16.87■□□□□ 0.29
LINC01170-202ENST00000628324 ATAD2BQ9ULI0 1458 aa16.87■□□□□ 0.29
LINC01170-202ENST00000628324 HMGXB3Q12766 1538 aa16.83■□□□□ 0.28
LINC01170-202ENST00000628324 SMARCA2P51531 1590 aa16.77■□□□□ 0.27
LINC01170-202ENST00000628324 NESP48681 1621 aa16.75■□□□□ 0.27
LINC01170-202ENST00000628324 THOC2Q8NI27 1593 aaKnown RBP16.71■□□□□ 0.27
LINC01170-202ENST00000628324 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
LINC01170-202ENST00000628324 PEG3Q9GZU2 1588 aa16.68■□□□□ 0.26
LINC01170-202ENST00000628324 LAMC3Q9Y6N6 1575 aa16.63■□□□□ 0.25
LINC01170-202ENST00000628324 BAZ1BQ9UIG0 1483 aaKnown RBP16.59■□□□□ 0.25
LINC01170-202ENST00000628324 BAZ1AQ9NRL2 1556 aaPredicted RBP16.57■□□□□ 0.24
LINC01170-202ENST00000628324 TRIM41Q8WV44 630 aa16.52■□□□□ 0.24
LINC01170-202ENST00000628324 SENP3Q9H4L4 574 aaPredicted RBP16.52■□□□□ 0.24
LINC01170-202ENST00000628324 PDS5BQ9NTI5 1447 aa16.52■□□□□ 0.23
LINC01170-202ENST00000628324 KIF21AQ7Z4S6 1674 aa16.5■□□□□ 0.23
LINC01170-202ENST00000628324 CADPSQ9ULU8 1353 aa16.43■□□□□ 0.22
LINC01170-202ENST00000628324 MROH2BQ7Z745 1585 aa16.43■□□□□ 0.22
LINC01170-202ENST00000628324 WDR62O43379 1518 aa16.41■□□□□ 0.22
LINC01170-202ENST00000628324 MRC2Q9UBG0 1479 aa16.39■□□□□ 0.21
LINC01170-202ENST00000628324 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
LINC01170-202ENST00000628324 CFTRP13569 1480 aa16.21■□□□□ 0.19
LINC01170-202ENST00000628324 CEP164Q9UPV0 1460 aa16.21■□□□□ 0.19
LINC01170-202ENST00000628324 FANCD2Q9BXW9 1451 aa16.19■□□□□ 0.18
LINC01170-202ENST00000628324 WIZO95785 1651 aa16.15■□□□□ 0.18
LINC01170-202ENST00000628324 URB2Q14146 1524 aaKnown RBP16.12■□□□□ 0.17
LINC01170-202ENST00000628324 RIMBP3CA6NJZ7 1639 aa16.05■□□□□ 0.16
LINC01170-202ENST00000628324 RIMBP3BA6NNM3 1639 aa16.05■□□□□ 0.16
LINC01170-202ENST00000628324 RIMBP3Q9UFD9 1639 aa16.05■□□□□ 0.16
LINC01170-202ENST00000628324 ARHGEF11O15085 1522 aa15.99■□□□□ 0.15
LINC01170-202ENST00000628324 PLPPR3Q6T4P5 718 aa15.98■□□□□ 0.15
LINC01170-202ENST00000628324 RSF1Q96T23 1441 aaPredicted RBP15.98■□□□□ 0.15
LINC01170-202ENST00000628324 TOP2AP11388 1531 aaKnown RBP15.96■□□□□ 0.15
LINC01170-202ENST00000628324 ZNF608Q9ULD9 1512 aaPredicted RBP15.95■□□□□ 0.14
LINC01170-202ENST00000628324 IFT140Q96RY7 1462 aa15.95■□□□□ 0.14
LINC01170-202ENST00000628324 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
LINC01170-202ENST00000628324 TOPBP1Q92547 1522 aa15.86■□□□□ 0.13
LINC01170-202ENST00000628324 ARAP1Q96P48 1450 aa15.83■□□□□ 0.12
LINC01170-202ENST00000628324 ABCC8Q09428 1581 aa15.83■□□□□ 0.12
LINC01170-202ENST00000628324 EIF4G3O43432 1585 aaKnown RBP15.81■□□□□ 0.12
LINC01170-202ENST00000628324 CYB5RLQ6IPT4 315 aa15.81■□□□□ 0.12
LINC01170-202ENST00000628324 CCDC88BA6NC98 1476 aa15.8■□□□□ 0.12
LINC01170-202ENST00000628324 TARBP1Q13395 1621 aaKnown RBP15.79■□□□□ 0.12
LINC01170-202ENST00000628324 DNMBPQ6XZF7 1577 aa15.75■□□□□ 0.11
LINC01170-202ENST00000628324 AQRO60306 1485 aaKnown RBP eCLIP15.74■□□□□ 0.11
LINC01170-202ENST00000628324 CHD1O14646 1710 aa15.73■□□□□ 0.11
LINC01170-202ENST00000628324 POLA1P09884 1462 aaPredicted RBP15.68■□□□□ 0.1
LINC01170-202ENST00000628324 CLASP1Q7Z460 1538 aa15.67■□□□□ 0.1
LINC01170-202ENST00000628324 TRHP20396 242 aaPredicted RBP15.65■□□□□ 0.1
LINC01170-202ENST00000628324 WDR97A6NE52 1622 aa15.63■□□□□ 0.09
LINC01170-202ENST00000628324 RAD54L2Q9Y4B4 1467 aa15.58■□□□□ 0.08
LINC01170-202ENST00000628324 TDRD9Q8NDG6 1382 aaKnown RBP15.57■□□□□ 0.08
LINC01170-202ENST00000628324 SOGA1O94964 1423 aa15.57■□□□□ 0.08
LINC01170-202ENST00000628324 MAGI1Q96QZ7 1491 aaPredicted RBP15.56■□□□□ 0.08
LINC01170-202ENST00000628324 FBLN2P98095 1184 aa15.54■□□□□ 0.08
LINC01170-202ENST00000628324 SNAPC4Q5SXM2 1469 aa15.53■□□□□ 0.08
LINC01170-202ENST00000628324 SYNJ1O43426 1573 aa15.52■□□□□ 0.07
LINC01170-202ENST00000628324 SYNJ2O15056 1496 aa15.5■□□□□ 0.07
LINC01170-202ENST00000628324 GRIN2BQ13224 1484 aa15.49■□□□□ 0.07
LINC01170-202ENST00000628324 FGD5Q6ZNL6 1462 aa15.48■□□□□ 0.07
LINC01170-202ENST00000628324 CHMP7Q8WUX9 453 aaPredicted RBP15.47■□□□□ 0.07
LINC01170-202ENST00000628324 GAPVD1Q14C86 1478 aa15.46■□□□□ 0.06
LINC01170-202ENST00000628324 CUX1P39880 1505 aa15.45■□□□□ 0.06
LINC01170-202ENST00000628324 ABCA10Q8WWZ4 1543 aa15.37■□□□□ 0.05
LINC01170-202ENST00000628324 ABCA5Q8WWZ7 1642 aa15.35■□□□□ 0.05
LINC01170-202ENST00000628324 PBRM1Q86U86 1689 aa15.34■□□□□ 0.05
LINC01170-202ENST00000628324 NUP160Q12769 1436 aa15.34■□□□□ 0.05
LINC01170-202ENST00000628324 ERCC6L2Q5T890 1561 aa15.32■□□□□ 0.04
LINC01170-202ENST00000628324 SHROOM2Q13796 1616 aa15.3■□□□□ 0.04
LINC01170-202ENST00000628324 GRIN2AQ12879 1464 aa15.29■□□□□ 0.04
LINC01170-202ENST00000628324 CEP170Q5SW79 1584 aa15.28■□□□□ 0.04
LINC01170-202ENST00000628324 ILDR1Q86SU0 546 aaPredicted RBP15.25■□□□□ 0.03
LINC01170-202ENST00000628324 KIF13AQ9H1H9 1805 aa15.24■□□□□ 0.03
LINC01170-202ENST00000628324 FOXD1Q16676 465 aa15.24■□□□□ 0.03
LINC01170-202ENST00000628324 ADAMTS12P58397 1594 aa15.22■□□□□ 0.03
LINC01170-202ENST00000628324 FHAD1B1AJZ9 1412 aa15.18■□□□□ 0.02
LINC01170-202ENST00000628324 WRNQ14191 1432 aaPredicted RBP eCLIP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms