RNA–Protein interactions for RNA: ENST00000628211.2

SOX2-OT-245, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 847 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-245ENST00000628211 NISCHQ9Y2I1 1504 aa25.84■■□□□ 1.73
SOX2-OT-245ENST00000628211 CCDC180Q9P1Z9 1646 aa23.08■■□□□ 1.29
SOX2-OT-245ENST00000628211 ABCC9O60706 1549 aa22.45■■□□□ 1.18
SOX2-OT-245ENST00000628211 AEBP2Q6ZN18 517 aaPredicted RBP22.29■■□□□ 1.16
SOX2-OT-245ENST00000628211 RB1CC1Q8TDY2 1594 aa21.63■■□□□ 1.05
SOX2-OT-245ENST00000628211 NACADO15069 1562 aa21.62■■□□□ 1.05
SOX2-OT-245ENST00000628211 MYO15BQ96JP2 1530 aa21.57■■□□□ 1.04
SOX2-OT-245ENST00000628211 ZCCHC6Q5VYS8 1495 aaKnown RBP21.57■■□□□ 1.04
SOX2-OT-245ENST00000628211 DCAF1Q9Y4B6 1507 aa21.48■■□□□ 1.03
SOX2-OT-245ENST00000628211 DCAF8L2P0C7V8 631 aa21.4■■□□□ 1.02
SOX2-OT-245ENST00000628211 CHIC1Q5VXU3 224 aa21.27■■□□□ 1
SOX2-OT-245ENST00000628211 UNC13AQ9UPW8 1703 aa21.12■□□□□ 0.97
SOX2-OT-245ENST00000628211 BICRAQ9NZM4 1560 aa20.92■□□□□ 0.94
SOX2-OT-245ENST00000628211 SCRIBQ14160 1630 aa20.92■□□□□ 0.94
SOX2-OT-245ENST00000628211 PABPN1Q86U42 306 aaKnown RBP eCLIP20.89■□□□□ 0.93
SOX2-OT-245ENST00000628211 DNAJC5BQ9UF47 199 aa20.85■□□□□ 0.93
SOX2-OT-245ENST00000628211 SHROOM4Q9ULL8 1493 aa20.85■□□□□ 0.93
SOX2-OT-245ENST00000628211 EIF4G1Q04637 1599 aaKnown RBP20.38■□□□□ 0.85
SOX2-OT-245ENST00000628211 CC2D2AQ9P2K1 1620 aa20.33■□□□□ 0.84
SOX2-OT-245ENST00000628211 CECR2Q9BXF3 1484 aa20.25■□□□□ 0.83
SOX2-OT-245ENST00000628211 BAZ1AQ9NRL2 1556 aaPredicted RBP20.08■□□□□ 0.81
SOX2-OT-245ENST00000628211 SMARCA4P51532 1647 aa20.07■□□□□ 0.8
SOX2-OT-245ENST00000628211 SMARCA2P51531 1590 aa19.96■□□□□ 0.79
SOX2-OT-245ENST00000628211 PEG3Q9GZU2 1588 aa19.91■□□□□ 0.78
SOX2-OT-245ENST00000628211 NCAPD3P42695 1498 aa19.89■□□□□ 0.77
SOX2-OT-245ENST00000628211 ATAD2BQ9ULI0 1458 aa19.88■□□□□ 0.77
SOX2-OT-245ENST00000628211 HMGXB3Q12766 1538 aa19.87■□□□□ 0.77
SOX2-OT-245ENST00000628211 MROH2BQ7Z745 1585 aa19.86■□□□□ 0.77
SOX2-OT-245ENST00000628211 BAZ1BQ9UIG0 1483 aaKnown RBP19.77■□□□□ 0.76
SOX2-OT-245ENST00000628211 WIZO95785 1651 aa19.68■□□□□ 0.74
SOX2-OT-245ENST00000628211 RSF1Q96T23 1441 aaPredicted RBP19.67■□□□□ 0.74
SOX2-OT-245ENST00000628211 TOP2AP11388 1531 aaKnown RBP19.54■□□□□ 0.72
SOX2-OT-245ENST00000628211 LAMC3Q9Y6N6 1575 aa19.42■□□□□ 0.7
SOX2-OT-245ENST00000628211 CUX2O14529 1486 aa19.39■□□□□ 0.69
SOX2-OT-245ENST00000628211 ERCC6Q03468 1493 aa19.38■□□□□ 0.69
SOX2-OT-245ENST00000628211 NESP48681 1621 aa19.35■□□□□ 0.69
SOX2-OT-245ENST00000628211 CADPSQ9ULU8 1353 aa19.3■□□□□ 0.68
SOX2-OT-245ENST00000628211 PDS5BQ9NTI5 1447 aa19.25■□□□□ 0.67
SOX2-OT-245ENST00000628211 PRDM2Q13029 1718 aa19.24■□□□□ 0.67
SOX2-OT-245ENST00000628211 CCDC88BA6NC98 1476 aa19.22■□□□□ 0.67
SOX2-OT-245ENST00000628211 CFTRP13569 1480 aa19.22■□□□□ 0.67
SOX2-OT-245ENST00000628211 KIF21AQ7Z4S6 1674 aa19.18■□□□□ 0.66
SOX2-OT-245ENST00000628211 THOC2Q8NI27 1593 aaKnown RBP19.18■□□□□ 0.66
SOX2-OT-245ENST00000628211 SUPT5HO00267 1087 aaKnown RBP19.14■□□□□ 0.65
SOX2-OT-245ENST00000628211 CEP164Q9UPV0 1460 aa19.09■□□□□ 0.65
SOX2-OT-245ENST00000628211 FANCD2Q9BXW9 1451 aa19.08■□□□□ 0.64
SOX2-OT-245ENST00000628211 MRC2Q9UBG0 1479 aa19.05■□□□□ 0.64
SOX2-OT-245ENST00000628211 DNAJC5Q9H3Z4 198 aa19.05■□□□□ 0.64
SOX2-OT-245ENST00000628211 WDR62O43379 1518 aa19.01■□□□□ 0.63
SOX2-OT-245ENST00000628211 SENP3Q9H4L4 574 aaPredicted RBP18.96■□□□□ 0.63
SOX2-OT-245ENST00000628211 ABCC8Q09428 1581 aa18.89■□□□□ 0.61
SOX2-OT-245ENST00000628211 URB2Q14146 1524 aaKnown RBP18.85■□□□□ 0.61
SOX2-OT-245ENST00000628211 DNMBPQ6XZF7 1577 aa18.83■□□□□ 0.6
SOX2-OT-245ENST00000628211 TOPBP1Q92547 1522 aa18.79■□□□□ 0.6
SOX2-OT-245ENST00000628211 PHF23Q9BUL5 403 aaPredicted RBP18.73■□□□□ 0.59
SOX2-OT-245ENST00000628211 IFT140Q96RY7 1462 aa18.69■□□□□ 0.58
SOX2-OT-245ENST00000628211 CUX1P39880 1505 aa18.64■□□□□ 0.58
SOX2-OT-245ENST00000628211 POLA1P09884 1462 aaPredicted RBP18.63■□□□□ 0.57
SOX2-OT-245ENST00000628211 BIVM-ERCC5R4GMW8 1640 aa18.6■□□□□ 0.57
SOX2-OT-245ENST00000628211 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
SOX2-OT-245ENST00000628211 FGD5Q6ZNL6 1462 aa18.59■□□□□ 0.57
SOX2-OT-245ENST00000628211 TARBP1Q13395 1621 aaKnown RBP18.59■□□□□ 0.57
SOX2-OT-245ENST00000628211 WRNQ14191 1432 aaPredicted RBP eCLIP18.58■□□□□ 0.57
SOX2-OT-245ENST00000628211 TOP2BQ02880 1626 aa18.58■□□□□ 0.56
SOX2-OT-245ENST00000628211 SOGA1O94964 1423 aa18.53■□□□□ 0.56
SOX2-OT-245ENST00000628211 EIF4G3O43432 1585 aaKnown RBP18.52■□□□□ 0.56
SOX2-OT-245ENST00000628211 ZNF608Q9ULD9 1512 aaPredicted RBP18.52■□□□□ 0.56
SOX2-OT-245ENST00000628211 SYNJ1O43426 1573 aa18.51■□□□□ 0.55
SOX2-OT-245ENST00000628211 RAD54L2Q9Y4B4 1467 aa18.47■□□□□ 0.55
SOX2-OT-245ENST00000628211 OSCARQ8IYS5 282 aa18.47■□□□□ 0.55
SOX2-OT-245ENST00000628211 ABCA10Q8WWZ4 1543 aa18.45■□□□□ 0.54
SOX2-OT-245ENST00000628211 ABCA5Q8WWZ7 1642 aa18.39■□□□□ 0.53
SOX2-OT-245ENST00000628211 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.53
SOX2-OT-245ENST00000628211 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
SOX2-OT-245ENST00000628211 GRIN2BQ13224 1484 aa18.36■□□□□ 0.53
SOX2-OT-245ENST00000628211 GAPVD1Q14C86 1478 aa18.35■□□□□ 0.53
SOX2-OT-245ENST00000628211 TDRD9Q8NDG6 1382 aaKnown RBP18.35■□□□□ 0.53
SOX2-OT-245ENST00000628211 MAGI1Q96QZ7 1491 aaPredicted RBP18.34■□□□□ 0.53
SOX2-OT-245ENST00000628211 CHD1O14646 1710 aa18.29■□□□□ 0.52
SOX2-OT-245ENST00000628211 SNAPC4Q5SXM2 1469 aa18.28■□□□□ 0.52
SOX2-OT-245ENST00000628211 ERICH3Q5RHP9 1530 aa18.27■□□□□ 0.51
SOX2-OT-245ENST00000628211 SYNJ2O15056 1496 aa18.23■□□□□ 0.51
SOX2-OT-245ENST00000628211 KIF27Q86VH2 1401 aa18.22■□□□□ 0.51
SOX2-OT-245ENST00000628211 ADAMTS12P58397 1594 aa18.21■□□□□ 0.51
SOX2-OT-245ENST00000628211 CUL7Q14999 1698 aa18.17■□□□□ 0.5
SOX2-OT-245ENST00000628211 ARHGEF11O15085 1522 aa18.17■□□□□ 0.5
SOX2-OT-245ENST00000628211 RIMBP3CA6NJZ7 1639 aa18.16■□□□□ 0.5
SOX2-OT-245ENST00000628211 RIMBP3BA6NNM3 1639 aa18.16■□□□□ 0.5
SOX2-OT-245ENST00000628211 RIMBP3Q9UFD9 1639 aa18.16■□□□□ 0.5
SOX2-OT-245ENST00000628211 FHAD1B1AJZ9 1412 aa18.16■□□□□ 0.5
SOX2-OT-245ENST00000628211 CHMP7Q8WUX9 453 aaPredicted RBP18.16■□□□□ 0.5
SOX2-OT-245ENST00000628211 TRIM41Q8WV44 630 aa18.15■□□□□ 0.5
SOX2-OT-245ENST00000628211 FBLN2P98095 1184 aa18.14■□□□□ 0.49
SOX2-OT-245ENST00000628211 CLASP1Q7Z460 1538 aa18.12■□□□□ 0.49
SOX2-OT-245ENST00000628211 GRIN2AQ12879 1464 aa18.11■□□□□ 0.49
SOX2-OT-245ENST00000628211 IGF1RP08069 1367 aa18.04■□□□□ 0.48
SOX2-OT-245ENST00000628211 NUP160Q12769 1436 aa18.02■□□□□ 0.48
SOX2-OT-245ENST00000628211 ARAP1Q96P48 1450 aa18.01■□□□□ 0.47
SOX2-OT-245ENST00000628211 CEP170Q5SW79 1584 aa18■□□□□ 0.47
SOX2-OT-245ENST00000628211 EEA1Q15075 1411 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms